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The map label for this gene is cas5e [C]

Identifier: 170680474

GI number: 170680474

Start: 2954148

End: 2954894

Strand: Reverse

Name: cas5e [C]

Synonym: EcSMS35_2885

Alternate gene names: 170680474

Gene position: 2954894-2954148 (Counterclockwise)

Preceding gene: 170679971

Following gene: 170681320

Centisome position: 58.3

GC content: 54.75

Gene sequence:

>747_bases
ATGAGCCAATATCTGATTTTTCAGCTTCATGGGCCAATGGCATCCTGGGGCGTTGATGCACCCGGTGAGGTGCGTCATAG
CCATGAACTGCCTTCGCGTTCAGCATTGCTGGGGCTGCTGGCTGCCGGGGTAGGGATACGGCGTGATGACACCGAATGCT
TAAACGCGTTTAATCGCCACTATTCACTGGTGGTTTGCGCCAGCCGTAACCCGCGCTGGGCACGGGATTATCACACGGTC
CAGATGCCAAAAGAGGTGCGTAAAGCGCGTTATTTCAGCCGTCGCGAAGAGTTGAGCGACCCTGATCTTCTAAGCGCGAT
TATCTCCCGGCGCGACTACTACACCGATGCCTGGTGGATGGTGGCCGTGGCAACAACAGCTGATGCGCCTTACAGCCTCG
AACAGTTGCAGGAAGGTTTACGCCATCCGGTTTTTCCGCTTTATCTGGGGCGAAAAAGCCATCCGCTGGCATTACCCCTT
GCGCCGTTACTGCTCGAAGGCAACGCGTCTGATGCCTTACGTAACGCATACCAACAGTATCAGGATCGTTTCCACGAACT
AAAAGTCTCACTCCCGAAACTTCAGGATGAATGCTGGTGGGAAGGGGAGCACGATGGCCTGGTCTCGAGCAAAATATTAC
GCCGCCGGGATGTTCCTTTAAATCGTCAGCAGTGGCTGTTTGGGGAACGCACCGTCAATCAGGGGCCGTGGCTCAGCAAG
GAGGAACCATGTACCTCTCAAGAATAA

Upstream 100 bases:

>100_bases
GTTTACGAACAGAAGACCGAATGCGCAAGTTTTGACGTGATGAACAAACAGGGAAGCATGAAGGACGTGCTGGACTTTAT
CTGCGCGTAAGGGGCGGCTT

Downstream 100 bases:

>100_bases
CCTTACATACCGGCCAGCTTTCGCCTGCGCAGTTGCTGCATCTGGTGGATCGCGGGGAATATGTGATGCATCAGTGGCTG
TGGGATCTTTTTCCTGGCGG

Product: CRISPR-associated Cas5 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5e Family Protein; CRISPR-Associated Cas5 Family Protein; Cytoplasmic Protein; CRISPR-Associated Protein; CRISPR-Associated E; Complete Genome; Crispr-Associated Protein Cas5e-Type; CRISPR-Associated Protein CT; CRISPR-Associated Subtype

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSQYLIFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAGVGIRRDDTECLNAFNRHYSLVVCASRNPRWARDYHTV
QMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQEGLRHPVFPLYLGRKSHPLALPL
APLLLEGNASDALRNAYQQYQDRFHELKVSLPKLQDECWWEGEHDGLVSSKILRRRDVPLNRQQWLFGERTVNQGPWLSK
EEPCTSQE

Sequences:

>Translated_248_residues
MSQYLIFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAGVGIRRDDTECLNAFNRHYSLVVCASRNPRWARDYHTV
QMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQEGLRHPVFPLYLGRKSHPLALPL
APLLLEGNASDALRNAYQQYQDRFHELKVSLPKLQDECWWEGEHDGLVSSKILRRRDVPLNRQQWLFGERTVNQGPWLSK
EEPCTSQE
>Mature_247_residues
SQYLIFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAGVGIRRDDTECLNAFNRHYSLVVCASRNPRWARDYHTVQ
MPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQEGLRHPVFPLYLGRKSHPLALPLA
PLLLEGNASDALRNAYQQYQDRFHELKVSLPKLQDECWWEGEHDGLVSSKILRRRDVPLNRQQWLFGERTVNQGPWLSKE
EPCTSQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082154, Length=179, Percent_Identity=34.0782122905028, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28609; Mature: 28477

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYLIFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAGVGIRRDDTECLNAFNRH
CCCEEEEEECCCHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
YSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWM
EEEEEECCCCCCCHHCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEE
VAVATTADAPYSLEQLQEGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDALRNAYQQY
EEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCHHEEECCCCHHHHHHHHHHH
QDRFHELKVSLPKLQDECWWEGEHDGLVSSKILRRRDVPLNRQQWLFGERTVNQGPWLSK
HHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCC
EEPCTSQE
CCCCCCCC
>Mature Secondary Structure 
SQYLIFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAGVGIRRDDTECLNAFNRH
CCEEEEEECCCHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
YSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWM
EEEEEECCCCCCCHHCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEE
VAVATTADAPYSLEQLQEGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDALRNAYQQY
EEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCHHEEECCCCHHHHHHHHHHH
QDRFHELKVSLPKLQDECWWEGEHDGLVSSKILRRRDVPLNRQQWLFGERTVNQGPWLSK
HHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCC
EEPCTSQE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA