| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is ycbG [H]
Identifier: 170681213
GI number: 170681213
Start: 2168657
End: 2169109
Strand: Reverse
Name: ycbG [H]
Synonym: EcSMS35_2164
Alternate gene names: 170681213
Gene position: 2169109-2168657 (Counterclockwise)
Preceding gene: 170682434
Following gene: 170682049
Centisome position: 42.8
GC content: 46.36
Gene sequence:
>453_bases ATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTGAAGAAGCATCGCGAAGGGGAGTT AATCACCCGTTACATAGAAGCCAGTGCCGCCCAGGAAGCCGTCGATGTGTTGCTCTCGCTGGAAAATGAACCCGTGCTGG TAAATAACTGGATTGATAAGCATATGAATCCGGAACTGGTCAATCGCATGAAGCAGACCATTCGGGCCAGACGGAAGCGC CATTTTAATGCGGAACACCAGCATACGCGCAAAAAATCGATCGATCTGGAATTTATTGTCTGGCAACGTCTGGCTGGTCT TGCGCAGCGTCGCGGTAAAACGCTTTCTGAAACGATTGTTCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGA ATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAA
Upstream 100 bases:
>100_bases CTGGCATGGGCGTTAAAGCTCACAGGATGGAGATTCTTTTCTTCACTGGCCCAAAAAGCTGATATTCTGTAAAGAGTTAC ACGGTAACATTGAGATCGCT
Downstream 100 bases:
>100_bases CTGTCAAAAGTCACTTCAATTTACTAAAGGCGAAAAAAAACCCCGCAGCTGCGGGGTTTTTTACCAGACGAGAACTTAAG CCTGCGGCTGAGTTACAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNNWIDKHMNPELVNRMKQTIRARRKR HFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE
Sequences:
>Translated_150_residues MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNNWIDKHMNPELVNRMKQTIRARRKR HFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE >Mature_150_residues MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNNWIDKHMNPELVNRMKQTIRARRKR HFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE
Specific function: Unknown
COG id: COG3120
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0268 family [H]
Homologues:
Organism=Escherichia coli, GI1787190, Length=150, Percent_Identity=99.3333333333333, Blast_Score=303, Evalue=3e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009390 - ProDom: PD033720 [H]
Pfam domain/function: PF06303 DUF1047 [H]
EC number: NA
Molecular weight: Translated: 17751; Mature: 17751
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNNWIDK CCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH HMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIV CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH QLIEDAENKEKYANKMSSLKQDLQALLGKE HHHHCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNNWIDK CCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH HMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIV CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH QLIEDAENKEKYANKMSSLKQDLQALLGKE HHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA