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The map label for this gene is ybjT [H]

Identifier: 170681016

GI number: 170681016

Start: 901751

End: 903181

Strand: Reverse

Name: ybjT [H]

Synonym: EcSMS35_0898

Alternate gene names: 170681016

Gene position: 903181-901751 (Counterclockwise)

Preceding gene: 170681482

Following gene: 170682810

Centisome position: 17.82

GC content: 55.35

Gene sequence:

>1431_bases
GTGCCGCAACGCATTTTAGTTCTCGGTGCCAGTGGCTACATTGGTCAGCATCTGGTGCGAACACTCAGCCAGCAGGGGCA
TCAGATCCTGGCGGCGGCACGTCATGTCGACAGGCTTGCAAAGCTGCAACTGGCAAATGTCAGTTGCCATAAAGTCGATC
TCAGCTGGCCGGATAACCTTCCGGCCCTGTTGCAGGATATCGATACGGTCTATTTTCTGGTGCACAGCATGGGCGAAGGC
GGCGATTTTATCGCTCAGGAGCGCCAGGTGGCTCTCAACGTCCGCGATGCGCTACGTGAAGTCCCAGTTAAGCAATTAAT
CTTTCTCAGTTCGTTGCAGGCCCCGCCACATGAGCAGTCGGACCATCTGCGCGCCCGTCAGGCTACGGCGGATATTCTTC
GTGAAGCGGGTGTCCCGGTGACCGAATTGCGTGCCGGAATAATCGTTGGTGCAGGTTCAGCGGCGTTCGAAGTCATGCGC
GATATGGTCTACAACCTGCCGGTGTTAACGCCGCCACGCTGGGTTCGTTCACGCACCACGCCCATCGCGCTGGAAAACTT
GCTGCACTATCTGGTGGCGCTGTTAGACCATCCAGCCAGCGAACATCGCATCTTCGAAGCCGCCGGACCAGAAGTGCTCA
GTTATCAGCAACAGTTTGAACATTTTATGGCGGTGAGCGGTAAGCGCCGCTGGTTGATCCCCATCCCCTTCCCCACCCGC
TGGATTTCGGTGTGGTTTCTCAATGTGATTACTTCCGTACCGCCCACTACCGCCAAAGCGTTGATTCAGGGGCTGAAACA
CGATCTGCTGGCAGATGACACCGCGTTACGTGCACTCATCCCACAACGGCTGATTGCTTTCGATGACGCGGTACGTCGCA
CCCTGAAAGAGGAAGAAAAGCTGGTCAACTCCAGCGACTGGGGATACGACGCTCAGGCCTTTGCCCGCTGGCGACCGGAG
TACGGTTATTTCGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCGGCTTTATGGCAGGTGGTGAATCA
AATCGGCGGTAGAGAGCGTTATTTCTTTGGTAATATTTTGTGGCAGACCCGGGCGCTGATGGACCGCGCGATCGGTCATA
AGCTGGCGAAAGGCCGCCCGGAGCGTGAATATTTGCAAACTGGCGATGCGGTAGACAGCTGGAAAGTGATTATCGTCGAG
CCGGAAAAACAACTTGCGTTGTTATTTGGCATGAAAGCGCCGGGGCTGGGACGACTGTGTTTTACCCTGGAAGATAAAGG
CGACTATCGTACTATCGATGTTCGCGCATTCTGGCATCCGCACGGGATGCCGGGGCTGTTTTACTGGTTACTGATGATCC
CCGCGCATCTGTTTATTTTTCGCGGAATGGCAAAACGAATCGCCAGACTGGCAGAACAAAGCACAGATTAA

Upstream 100 bases:

>100_bases
CCGATTGTCCGCCTGGTGACGCATCTTGACGTCTCGCGCGCTCAGCTGGCGGAAGTCGCCGCCCACTGGCGCGCATTCCT
GGCGCGTTAAGGAGGGAGAC

Downstream 100 bases:

>100_bases
TCGACAAAACCTGCGTTATTCTTTCATGTTTCCCATTGCATCATAGGGGAAATCACGGAAGAATGCGCACGTCATTTTCT
CAACAACAGTGGATTGATAT

Product: NAD dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEG
GDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPFPTR
WISVWFLNVITSVPPTTAKALIQGLKHDLLADDTALRALIPQRLIAFDDAVRRTLKEEEKLVNSSDWGYDAQAFARWRPE
YGYFAKQAGFTVKTSASLAALWQVVNQIGGRERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIIVE
PEKQLALLFGMKAPGLGRLCFTLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIARLAEQSTD

Sequences:

>Translated_476_residues
MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEG
GDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPFPTR
WISVWFLNVITSVPPTTAKALIQGLKHDLLADDTALRALIPQRLIAFDDAVRRTLKEEEKLVNSSDWGYDAQAFARWRPE
YGYFAKQAGFTVKTSASLAALWQVVNQIGGRERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIIVE
PEKQLALLFGMKAPGLGRLCFTLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIARLAEQSTD
>Mature_475_residues
PQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGG
DFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMRD
MVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPFPTRW
ISVWFLNVITSVPPTTAKALIQGLKHDLLADDTALRALIPQRLIAFDDAVRRTLKEEEKLVNSSDWGYDAQAFARWRPEY
GYFAKQAGFTVKTSASLAALWQVVNQIGGRERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIIVEP
EKQLALLFGMKAPGLGRLCFTLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIARLAEQSTD

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=476, Percent_Identity=98.109243697479, Blast_Score=960, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53780; Mature: 53649

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNL
CCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCH
DHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPFPTR
HHHHHHHHHHHHHHHCCCCHHCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHH
WISVWFLNVITSVPPTTAKALIQGLKHDLLADDTALRALIPQRLIAFDDAVRRTLKEEEK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGRERYFFGNIL
HCCCCCCCCCHHHHHHCCCCCCCHHHHCCCEEECCHHHHHHHHHHHHHCCCCEEEHHHHH
WQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIIVEPEKQLALLFGMKAPGLGRLC
HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCCHHEEHHCCCCCCCCCEEE
FTLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIARLAEQSTD
EEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNL
CCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCH
DHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPFPTR
HHHHHHHHHHHHHHHCCCCHHCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHH
WISVWFLNVITSVPPTTAKALIQGLKHDLLADDTALRALIPQRLIAFDDAVRRTLKEEEK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGRERYFFGNIL
HCCCCCCCCCHHHHHHCCCCCCCHHHHCCCEEECCHHHHHHHHHHHHHCCCCEEEHHHHH
WQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIIVEPEKQLALLFGMKAPGLGRLC
HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCCHHEEHHCCCCCCCCCEEE
FTLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIARLAEQSTD
EEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]