| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is pykA
Identifier: 170680822
GI number: 170680822
Start: 1321014
End: 1322456
Strand: Reverse
Name: pykA
Synonym: EcSMS35_1332
Alternate gene names: 170680822
Gene position: 1322456-1321014 (Counterclockwise)
Preceding gene: 170683767
Following gene: 170682668
Centisome position: 26.09
GC content: 52.6
Gene sequence:
>1443_bases ATGTCCAGAAGGCTTCGCAGAACTAAAATCGTTACCACGTTAGGCCCGGCAACAGATCGCGATAATAACCTTGAAAAAGT TATCGCGGCGGGTGCCAACGTTGTACGTATGAATTTTTCTCACGGCTCGCCTGAAGATCACAAAATGCGCGCGGATAAAG TTCGTGAGATTGCCGCAAAACTGGGGCGTCATGTGGCTATTCTGGGTGACCTCCAGGGGCCCAAAATCCGTGTATCCACC TTTAAAGAAGGCAAAGTTTTCCTCAATATTGGGGATAAATTCCTGCTCGACGCCAACCTGGGTAAAGGTGAAGGCGACAA AGAAAAAGTCGGTATCGACTACAAAGGCCTGCCTGCTGACGTTGTGCCTGGTGACATCCTGCTGCTGGACGATGGTCGCG TCCAGTTAAAAGTACTGGAAGTCCAGGGCATGAAAGTGTTCACCGAAGTGACCGTCGGTGGTCCCCTCTCCAACAATAAA GGTATCAACAAACTTGGCGGCGGTTTGTCGGCTGAAGCGCTGACCGAAAAAGACAAAGCAGACATTAAGACTGCGGCGTT AATTGGCGTAGATTACCTGGCTGTCTCCTTCCCACGCTGCGGCGAAGATCTGAACTATGCCCGTCGCCTGGCACGCGATG CAGGATGTGATGCGAAAATTGTTGCCAAGGTTGAACGTGCGGAAGCCGTATGCAGCCAGGATGCAATGGATGACATCATC CTCGCCTCTGACGTGGTAATGGTTGCTCGCGGCGACCTCGGTGTGGAAATTGGCGATCCGGAACTGGTCGGCATTCAGAA GGCGTTGATCCGTCGTGCACGTCAGCTTAACCGCGCAGTAATCACTGCGACCCAGATGATGGAGTCAATGATTACTAACC CGATGCCGACGCGTGCAGAAGTCATGGACGTAGCAAACGCCGTTCTGGATGGTACTGACGCTGTGATGCTTTCTGCAGAA ACTGCTGCTGGTCAGTATCCTTCAGAAACTGTTGCAGCCATGGCGCGCGTTTGCCTGGGTGCGGAAAAAATCCCGAGCAT CAACGTTTCTAAACACCGTCTGGACGTTCAGTTCGACAATGTGGAAGAAGCTATCGCCATGTCAGCAATGTACGCGGCTA ACCACCTGAAAGGCGTTACGGCGATCATCACCATGACCGAATCGGGTCGTACGGCGCTGATGACCTCCCGTATCAGCTCT GGTCTGCCAATTTTCGCCATGTCACGCCATGAACGTACGCTGAACCTGACTGCTCTCTATCGCGGCGTTACGCCGGTGCA CTTTGATAGCGCTAATGACGGCGTAGCAGCTGCCAGCGAAGCGGTTAATCTGCTGCGCGATAAAGGTTACTTGATGTCTG GTGACCTGGTGATTGTCACCCAGGGCGACGTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAG TAA
Upstream 100 bases:
>100_bases ACGACATCCGAATGAGATTAATTTATCGCCATCGCGGCGTTATTTCATTCGGATTTCATGTTCAAGCAACACCTGGTTGT TTCAGTCAACGGAGTATTAC
Downstream 100 bases:
>100_bases GTACGTTGCCGGATGCGGCGAAAACGCCTCATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATCTTCTGAAG CAAACTTGAACTTATCACAC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVST FKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDII LASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISS GLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTNTTRILTVE
Sequences:
>Translated_480_residues MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVST FKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDII LASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISS GLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTNTTRILTVE >Mature_479_residues SRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTF KEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKG INKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDIIL ASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAET AAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSG LPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTNTTRILTVE
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family
Homologues:
Organism=Homo sapiens, GI33286422, Length=502, Percent_Identity=37.0517928286853, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI33286420, Length=502, Percent_Identity=37.0517928286853, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI33286418, Length=495, Percent_Identity=37.1717171717172, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI10835121, Length=494, Percent_Identity=35.2226720647773, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI32967597, Length=494, Percent_Identity=35.2226720647773, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=35.8620689655172, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=35.8620689655172, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI310128736, Length=239, Percent_Identity=33.8912133891213, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI310128734, Length=239, Percent_Identity=33.8912133891213, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=33.4883720930233, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1788160, Length=480, Percent_Identity=100, Blast_Score=969, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=488, Percent_Identity=36.8852459016393, Blast_Score=280, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17544584, Length=489, Percent_Identity=36.40081799591, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI17506829, Length=494, Percent_Identity=37.4493927125506, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71984413, Length=494, Percent_Identity=37.4493927125506, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI71984406, Length=494, Percent_Identity=37.4493927125506, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17506831, Length=494, Percent_Identity=37.4493927125506, Blast_Score=246, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6319279, Length=490, Percent_Identity=36.1224489795918, Blast_Score=254, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6324923, Length=499, Percent_Identity=34.8697394789579, Blast_Score=250, Evalue=3e-67, Organism=Drosophila melanogaster, GI24648964, Length=494, Percent_Identity=37.246963562753, Blast_Score=264, Evalue=9e-71, Organism=Drosophila melanogaster, GI28571814, Length=494, Percent_Identity=37.246963562753, Blast_Score=263, Evalue=1e-70, Organism=Drosophila melanogaster, GI24648966, Length=418, Percent_Identity=36.1244019138756, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24581235, Length=491, Percent_Identity=32.1792260692464, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI24646914, Length=311, Percent_Identity=34.0836012861736, Blast_Score=140, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KPYK2_ECOLI (P21599)
Other databases:
- EMBL: M63703 - EMBL: U00096 - EMBL: AP009048 - EMBL: M77039 - EMBL: M87660 - PIR: S29790 - RefSeq: AP_002474.1 - RefSeq: NP_416368.1 - ProteinModelPortal: P21599 - SMR: P21599 - DIP: DIP-10622N - MINT: MINT-1238649 - STRING: P21599 - PRIDE: P21599 - EnsemblBacteria: EBESCT00000004674 - EnsemblBacteria: EBESCT00000014499 - GeneID: 946527 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW1843 - KEGG: eco:b1854 - EchoBASE: EB0796 - EcoGene: EG10803 - eggNOG: COG0469 - GeneTree: EBGT00050000009296 - HOGENOM: HBG734376 - OMA: SRSRQLN - ProtClustDB: PRK05826 - BioCyc: EcoCyc:PKII-MONOMER - BioCyc: MetaCyc:PKII-MONOMER - Genevestigator: P21599 - GO: GO:0005829 - GO: GO:0006096 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 - Gene3D: G3DSA:2.40.33.10 - Gene3D: G3DSA:3.20.20.60 - Gene3D: G3DSA:3.40.1380.20 - PANTHER: PTHR11817 - PRINTS: PR01050 - TIGRFAMs: TIGR01064
Pfam domain/function: PF00224 PK; PF02887 PK_C; SSF50800 PK_B_barrel_like; SSF52935 Pyruvate_kinase; SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: =2.7.1.40
Molecular weight: Translated: 51358; Mature: 51227
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: BINDING 36-36 BINDING 251-251 BINDING 252-252 BINDING 284-284
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAK CCCCCCHHEEEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPAD HCCEEEEEECCCCCEEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCEECCCCCCCCCC VVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKA CCCCCEEEEECCCEEEEEEEECCEEEEEEEEECCCCCCCCCCHHHCCCCCHHHHCCCHHH DIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDII HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAE HHCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDN HHHHHHHHHCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEECC VEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALY HHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEHHHHCCCCCEEEECCCCCEEEEEEEE RGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTNTTRILTVE CCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEECCEEEEECCCHHHHCCCCCCEEEEEEC >Mature Secondary Structure SRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAK CCCCCHHEEEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPAD HCCEEEEEECCCCCEEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCEECCCCCCCCCC VVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKA CCCCCEEEEECCCEEEEEEEECCEEEEEEEEECCCCCCCCCCHHHCCCCCHHHHCCCHHH DIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDII HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAE HHCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDN HHHHHHHHHCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEECC VEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALY HHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEHHHHCCCCCEEEECCCCCEEEEEEEE RGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTNTTRILTVE CCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEECCEEEEECCCHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398