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The map label for this gene is ycaQ [H]

Identifier: 170680727

GI number: 170680727

Start: 2216636

End: 2217868

Strand: Reverse

Name: ycaQ [H]

Synonym: EcSMS35_2204

Alternate gene names: 170680727

Gene position: 2217868-2216636 (Counterclockwise)

Preceding gene: 170683237

Following gene: 170680062

Centisome position: 43.76

GC content: 52.39

Gene sequence:

>1233_bases
ATGTCGCTGCCGCACCTCTCTCTTGCTGATGCGCGTAATCTTCACCTCGCCGCGCAAGGCCTGTTAAACAAACCCCGCCG
TCGAGCGTCGTTGGAGGATATTCCGGCAACGATCTCCCGCATGTCCTTGCTGCAAATCGATACCATCAATATTGTTGCCC
GTAGCCCATATCTGGTGCTTTTCAGTCGTCTGGGAAATTATCCTGCCCAGTGGCTGGATGAGTCTCTGGCGCGTGGCGAA
TTAATGGAATACTGGGCGCATGAAGCCTGCTTTATGCCACGTAGCGATTTTCGTCTTATTCGCCACCGCATGCTGGCACC
TGAAAAAATGGGCTGGAAATACAAAGACGCCTGGATGCAGGAACATGAGGTGGAAATTGCACAGTTAATTCAGCATATTC
ATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGGGCAAGCGGCTGGTGGGAGTGGAAGCCGCAT
AAACGACATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGCGCGTTTATGATTT
AACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATA
ACAGTGCGCGTAGCCTGGGCATATTCCGCGAACAGTGGCTGGCAGATTACTATCGGCTGAAACGTCCGGCACTGGCGGCT
TGGCGCGAAGCGAGGGCTGAACTGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGTTGCATGCTGA
TTTGCTGCCGCTACTCGAGCGTGCGCTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTG
TTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCTGCGCCGAAACGC
CAGTATGGCTATTTTGTTCTGCCGTTATTACATCGTGGGCAATTAGTTGGGCGAATGGATGCCAAAATGCATCGCCAGAC
AGGCATCCTTGAAGTTATCTCTCTGTGGTTACAGGAAGGCATTAAACCAACGACAACGCTGCAAAAAGGGTTACGTCAGG
CGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGACGCTGCCCGCAAGGCCTCTTTACTGATTGC
CGCACCGGCTGGGAAATAGACCCCGTCGCATAA

Upstream 100 bases:

>100_bases
GCTTTCAGGTGATGAACCAGCGAAACTGCTTGCGCAACTAACCTCGCTGGCTTCTGGCAACTAGTTACGCCGCGGCAGCG
TTCGATTGATGGAGTCATGA

Downstream 100 bases:

>100_bases
ATGATTATGATAAGATTTATGCATTCATAACCCGATCCATCTGGAGGAACTATGGATCATCGTCTGCTTGAAATCATTGC
CTGCCCGGTTTGCAACGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGE
LMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQEHEVEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH
KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA
WREARAELQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKR
QYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEGIKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDC
RTGWEIDPVA

Sequences:

>Translated_410_residues
MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGE
LMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQEHEVEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH
KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA
WREARAELQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKR
QYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEGIKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDC
RTGWEIDPVA
>Mature_409_residues
SLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGEL
MEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQEHEVEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPHK
RHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAAW
REARAELQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQ
YGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEGIKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDCR
TGWEIDPVA

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=410, Percent_Identity=99.0243902439024, Blast_Score=835, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 47679; Mature: 47547

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVL
CCCCCCCHHCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHEEEEEEEEECCHHHHH
FSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHH
EHEVEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPHKRHLEGLFTAGKVMVIERRN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC
FQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA
HHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHH
WREARAELQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCHHH
AEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEG
HHHHHCCCEEEEEECCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
IKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDCRTGWEIDPVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVL
CCCCCCHHCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHEEEEEEEEECCHHHHH
FSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHH
EHEVEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPHKRHLEGLFTAGKVMVIERRN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC
FQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA
HHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHH
WREARAELQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCHHH
AEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEG
HHHHHCCCEEEEEECCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
IKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDCRTGWEIDPVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]