| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
Click here to switch to the map view.
The map label for this gene is yfgJ [H]
Identifier: 170680650
GI number: 170680650
Start: 2731567
End: 2731782
Strand: Reverse
Name: yfgJ [H]
Synonym: EcSMS35_2662
Alternate gene names: 170680650
Gene position: 2731782-2731567 (Counterclockwise)
Preceding gene: 170681267
Following gene: 170681535
Centisome position: 53.9
GC content: 46.76
Gene sequence:
>216_bases ATGGCACTCAACTGTCCAACCTGCAAAACCCCTCTCGAACGCAATGGCGGGACTGCTCACTGTGCAACTTGTGCCAAAGA TTTCACCATTCAGGCTCTTTGTCCTGACTGCCACCAGCCATTGCAGGTATTAAAAGCATGCGGTGCGGTGGATTATTTCT GCCAATATGGGCACGGTTTAATTTCTAAAACACGCGTTGAATTTGTTATTGTGTAA
Upstream 100 bases:
>100_bases GTAAGCGTCTGATGAAGCACATCAAGAAAAGTAAGTAATCACTTATCTGGTTTCCCTTTCCACACGGAGAGGGAAACCGA ATAACACGCGAGGAGTATTT
Downstream 100 bases:
>100_bases TATCATTTAAATATATGATTTTATCATTCATATTTATAATATGGATGATTATGCCATTTTTGTATTAGTTGAATTACTAA TATGAGTGGAAAAAATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MALNCPTCKTPLERNGGTAHCATCAKDFTIQALCPDCHQPLQVLKACGAVDYFCQYGHGLISKTRVEFVIV
Sequences:
>Translated_71_residues MALNCPTCKTPLERNGGTAHCATCAKDFTIQALCPDCHQPLQVLKACGAVDYFCQYGHGLISKTRVEFVIV >Mature_70_residues ALNCPTCKTPLERNGGTAHCATCAKDFTIQALCPDCHQPLQVLKACGAVDYFCQYGHGLISKTRVEFVIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082119, Length=70, Percent_Identity=65.7142857142857, Blast_Score=102, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010807 - ProDom: PD060428 [H]
Pfam domain/function: PF07191 DUF1407 [H]
EC number: NA
Molecular weight: Translated: 7702; Mature: 7571
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 12.7 %Cys+Met (Translated Protein) 11.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 11.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNCPTCKTPLERNGGTAHCATCAKDFTIQALCPDCHQPLQVLKACGAVDYFCQYGHGL CCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCC ISKTRVEFVIV CCCCCEEEEEC >Mature Secondary Structure ALNCPTCKTPLERNGGTAHCATCAKDFTIQALCPDCHQPLQVLKACGAVDYFCQYGHGL CCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCC ISKTRVEFVIV CCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]