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The map label for this gene is 170079396

Identifier: 170079396

GI number: 170079396

Start: 2932931

End: 2933893

Strand: Reverse

Name: 170079396

Synonym: SYNPCC7002_A2810

Alternate gene names: NA

Gene position: 2933893-2932931 (Counterclockwise)

Preceding gene: 170079401

Following gene: 170079395

Centisome position: 97.53

GC content: 48.91

Gene sequence:

>963_bases
ATGCCTTATACTCTCGATGCAGCAAGAAACATTTTCCCCAGTACATTAACTGCGGATGTTGTGCCGGCTACCAGCGCTCG
GTTTAGTCAGCTGAGTGCAGAGGATCAACTGGCATTAATTTGGTTCGCTTACCTAGAAATGGGTAAGTCAATCACTATTG
CTGCTCCTGGTGCGGCAAATATGCAGTTTGCAGAATCTACCCTTTTGCAAATCAAGCAGCTCTCTTTTAAGGATCAAGCC
CAGGTGATGTGTGATCTGGCGAACCGCATCGATACGCCCATTAACCGCACCTATGCGACTTGGTCTGTAAATATTAAGCT
CGGTTTCTGGTATCGCCTCGGCGAATGGATGGAAGAAGGCAGTGTTGCGCCAATTCCTGCTGGCTACAAGTTGTCTGCCA
ATGCTTCTGCGGTTTTAGATACGATCCGTAGCCTCGAACCCGGCCAACAAATTACGGTTTTGAGAAATGCCGTTGTGGAT
ATGGGTTTTGACCCAGCCAAGATGGAAGGCTATCAGCGTGTTTCTGAGCCGGTTGTCGTGCCGACGGAAATTGCACAGCG
GGAAAAAATCGAAATTGAAGGTGTCGATAACCCCACGATTAATCAGTACATGACCAACCTCAATGCTAATGATTTTCCGG
CATTGATCAGCCTCTTTGCAGAAGATGGTGCTCTCCAGCCGCCGTTCCAGCGTCCGATTGTCGGCAAAGATGCCGTATTA
CGTTTCTTCCAAGAGGAATGTCAAAATCTGAAGCTCAACCCGAAGAAAGGGGTTGTAGAACCCACTGATGATGGTTACAC
CCAAATTAAAGTCACTGGTACCTGTGAAACGCCCTGGTTCGGTGCGGCGGTAGGCATGAATGTGGCTTGGCGCTTCCTCC
TCAATCCGGAAGGGAAAATTTTCTTTGTGGCCGTTGATTTGCTCGCGTCTGCGAAAGAACTGCTCAACCTTGTGCGCAAG
TAG

Upstream 100 bases:

>100_bases
TCGCCAACATATTCTTATTCAAGATGTAAACAATTGTTAAGTTTTTGTGTGTTAACCTTGACTCAAGGACAAAAACTCAA
ATAACACGGAGCACATCTGT

Downstream 100 bases:

>100_bases
TGAATGCTTGGATGAATTGCCCTAATTCTCAATAAATTCATCCCTAGGTAACGTCCCAATTGGGGCGTTTTTTTGTCAGT
ATGGCGTGGTTGGAGGCAAT

Product: carotenoid binding protein

Products: NA

Alternate protein names: OCP; RCP [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MPYTLDAARNIFPSTLTADVVPATSARFSQLSAEDQLALIWFAYLEMGKSITIAAPGAANMQFAESTLLQIKQLSFKDQA
QVMCDLANRIDTPINRTYATWSVNIKLGFWYRLGEWMEEGSVAPIPAGYKLSANASAVLDTIRSLEPGQQITVLRNAVVD
MGFDPAKMEGYQRVSEPVVVPTEIAQREKIEIEGVDNPTINQYMTNLNANDFPALISLFAEDGALQPPFQRPIVGKDAVL
RFFQEECQNLKLNPKKGVVEPTDDGYTQIKVTGTCETPWFGAAVGMNVAWRFLLNPEGKIFFVAVDLLASAKELLNLVRK

Sequences:

>Translated_320_residues
MPYTLDAARNIFPSTLTADVVPATSARFSQLSAEDQLALIWFAYLEMGKSITIAAPGAANMQFAESTLLQIKQLSFKDQA
QVMCDLANRIDTPINRTYATWSVNIKLGFWYRLGEWMEEGSVAPIPAGYKLSANASAVLDTIRSLEPGQQITVLRNAVVD
MGFDPAKMEGYQRVSEPVVVPTEIAQREKIEIEGVDNPTINQYMTNLNANDFPALISLFAEDGALQPPFQRPIVGKDAVL
RFFQEECQNLKLNPKKGVVEPTDDGYTQIKVTGTCETPWFGAAVGMNVAWRFLLNPEGKIFFVAVDLLASAKELLNLVRK
>Mature_319_residues
PYTLDAARNIFPSTLTADVVPATSARFSQLSAEDQLALIWFAYLEMGKSITIAAPGAANMQFAESTLLQIKQLSFKDQAQ
VMCDLANRIDTPINRTYATWSVNIKLGFWYRLGEWMEEGSVAPIPAGYKLSANASAVLDTIRSLEPGQQITVLRNAVVDM
GFDPAKMEGYQRVSEPVVVPTEIAQREKIEIEGVDNPTINQYMTNLNANDFPALISLFAEDGALQPPFQRPIVGKDAVLR
FFQEECQNLKLNPKKGVVEPTDDGYTQIKVTGTCETPWFGAAVGMNVAWRFLLNPEGKIFFVAVDLLASAKELLNLVRK

Specific function: Acts as a photo-protectant. Essential for inhibiting white and blue-green light non-photochemical quenching (NPQ). Binding carotenoids improves OCP's intrinsic photoprotectant activity by broadening its absorption spectrum and facilitating the dissipation

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane. Note=Associated with the phycobilisome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002075
- InterPro:   IPR015233 [H]

Pfam domain/function: PF09150 Carot_N; PF02136 NTF2 [H]

EC number: NA

Molecular weight: Translated: 35389; Mature: 35258

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYTLDAARNIFPSTLTADVVPATSARFSQLSAEDQLALIWFAYLEMGKSITIAAPGAAN
CCEEHHHHHHCCCCCHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCC
MQFAESTLLQIKQLSFKDQAQVMCDLANRIDTPINRTYATWSVNIKLGFWYRLGEWMEEG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEHHHHHHHHHCC
SVAPIPAGYKLSANASAVLDTIRSLEPGQQITVLRNAVVDMGFDPAKMEGYQRVSEPVVV
CCCCCCCCCEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEE
PTEIAQREKIEIEGVDNPTINQYMTNLNANDFPALISLFAEDGALQPPFQRPIVGKDAVL
CHHHCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RFFQEECQNLKLNPKKGVVEPTDDGYTQIKVTGTCETPWFGAAVGMNVAWRFLLNPEGKI
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHCCCEEEEEEECCCCCE
FFVAVDLLASAKELLNLVRK
EEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PYTLDAARNIFPSTLTADVVPATSARFSQLSAEDQLALIWFAYLEMGKSITIAAPGAAN
CEEHHHHHHCCCCCHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCC
MQFAESTLLQIKQLSFKDQAQVMCDLANRIDTPINRTYATWSVNIKLGFWYRLGEWMEEG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEHHHHHHHHHCC
SVAPIPAGYKLSANASAVLDTIRSLEPGQQITVLRNAVVDMGFDPAKMEGYQRVSEPVVV
CCCCCCCCCEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEE
PTEIAQREKIEIEGVDNPTINQYMTNLNANDFPALISLFAEDGALQPPFQRPIVGKDAVL
CHHHCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RFFQEECQNLKLNPKKGVVEPTDDGYTQIKVTGTCETPWFGAAVGMNVAWRFLLNPEGKI
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHCCCEEEEEEECCCCCE
FFVAVDLLASAKELLNLVRK
EEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA