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The map label for this gene is crtW [H]

Identifier: 170079395

GI number: 170079395

Start: 2932105

End: 2932827

Strand: Reverse

Name: crtW [H]

Synonym: SYNPCC7002_A2809

Alternate gene names: 170079395

Gene position: 2932827-2932105 (Counterclockwise)

Preceding gene: 170079396

Following gene: 170079394

Centisome position: 97.5

GC content: 50.62

Gene sequence:

>723_bases
TTGAAATTGATGCGGCAAGAAGAGGGTCTGGGACTACTGTGGGCGATCGCCATTTTCTCAGCTTGGCTGGGAAGTGCTGT
GTATTGGTTGAGTCATCCGCTAATGGGGCTGTCCTGGCCTGGGATTGTTGCGGGAATTTTTGTGAGAACTTTTTTCCACA
CAGGTTTATTTATCCTGGCCCACGACGCCATGCACGGTAATTTGTTGCCGAGTTCTCCCCGTTGGAACCATCGCCTGGGC
CGTTGGGGGGTCAGCTTGTACGCTTGCTTGTCCTACAAAGACTGCATTCGCAACCATGCTAAGCACCATCGCCACCCCGC
CCAATCCGGAGACCCGGACTTTCACAATGGGCGGCACCGCCATCCGCTGCTGTGGTACTGGCATTTTATGGGGAAATATT
TAGCGTGGCGGCAGTTTTGGGGATTTGTGCTAATTTTCGGGGTGATCGCCTTACCGTTAAATGTGCTGGGCCATGTGCCC
TACGAAAATTTTTTTGTGTTTTGCCTGCTACCGATTTTTCTCAGTTCTTGGCAACTGTTTTTCTTTGGGACTTATCTGCC
CCACCGTGATCGCCCTTCTCCCCCTAAACGCATCAGTAAACAGTCAATTCGGTGGCGAATTTGGTCATTTTTGAGCTGCT
ACCACTTCGGCACATTTCACGAAGAACACCATCATCATCCCCATGAACCTTGGTTTCAGTTACCGGATCACGGTGTTTCT
TAA

Upstream 100 bases:

>100_bases
ATGCTTGGATGAATTGCCCTAATTCTCAATAAATTCATCCCTAGGTAACGTCCCAATTGGGGCGTTTTTTTGTCAGTATG
GCGTGGTTGGAGGCAATATT

Downstream 100 bases:

>100_bases
CAAAATTGTAATAAAAACCTTAAATTCCTGTGAGCACTTCGCTTGAGCGGTATTCGTGTCTCGGCGATCGCCGCCAAATG
GCGGAATTATGAGAATTTAG

Product: beta-carotene oxygenase (ketolase)

Products: NA

Alternate protein names: Beta-carotene oxygenase [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKLMRQEEGLGLLWAIAIFSAWLGSAVYWLSHPLMGLSWPGIVAGIFVRTFFHTGLFILAHDAMHGNLLPSSPRWNHRLG
RWGVSLYACLSYKDCIRNHAKHHRHPAQSGDPDFHNGRHRHPLLWYWHFMGKYLAWRQFWGFVLIFGVIALPLNVLGHVP
YENFFVFCLLPIFLSSWQLFFFGTYLPHRDRPSPPKRISKQSIRWRIWSFLSCYHFGTFHEEHHHHPHEPWFQLPDHGVS

Sequences:

>Translated_240_residues
MKLMRQEEGLGLLWAIAIFSAWLGSAVYWLSHPLMGLSWPGIVAGIFVRTFFHTGLFILAHDAMHGNLLPSSPRWNHRLG
RWGVSLYACLSYKDCIRNHAKHHRHPAQSGDPDFHNGRHRHPLLWYWHFMGKYLAWRQFWGFVLIFGVIALPLNVLGHVP
YENFFVFCLLPIFLSSWQLFFFGTYLPHRDRPSPPKRISKQSIRWRIWSFLSCYHFGTFHEEHHHHPHEPWFQLPDHGVS
>Mature_240_residues
MKLMRQEEGLGLLWAIAIFSAWLGSAVYWLSHPLMGLSWPGIVAGIFVRTFFHTGLFILAHDAMHGNLLPSSPRWNHRLG
RWGVSLYACLSYKDCIRNHAKHHRHPAQSGDPDFHNGRHRHPLLWYWHFMGKYLAWRQFWGFVLIFGVIALPLNVLGHVP
YENFFVFCLLPIFLSSWQLFFFGTYLPHRDRPSPPKRISKQSIRWRIWSFLSCYHFGTFHEEHHHHPHEPWFQLPDHGVS

Specific function: Converts beta-carotene to canthaxanthin via echinenone [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 28378; Mature: 28378

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure
MKLMRQEEGLGLLWAIAIFSAWLGSAVYWLSHPLMGLSWPGIVAGIFVRTFFHTGLFILA
CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEE
HDAMHGNLLPSSPRWNHRLGRWGVSLYACLSYKDCIRNHAKHHRHPAQSGDPDFHNGRHR
EHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
HPLLWYWHFMGKYLAWRQFWGFVLIFGVIALPLNVLGHVPYENFFVFCLLPIFLSSWQLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHH
FFGTYLPHRDRPSPPKRISKQSIRWRIWSFLSCYHFGTFHEEHHHHPHEPWFQLPDHGVS
HHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]