| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079344
Identifier: 170079344
GI number: 170079344
Start: 2877132
End: 2877722
Strand: Reverse
Name: 170079344
Synonym: SYNPCC7002_A2753
Alternate gene names: NA
Gene position: 2877722-2877132 (Counterclockwise)
Preceding gene: 170079347
Following gene: 170079343
Centisome position: 95.67
GC content: 51.27
Gene sequence:
>591_bases GTGATTCTCCATCAAGCGGAGTTGCAGGGGAACATCTGGGAAAAAATCCTCCATTCCCAAGGGCTACAGTCTGTGATCTT GCCCTTCAGCGTTGATCTGCAGGGAGAGCTCCTGGATTTGGCGGCGGCCCAACAATCTTTACCCAACTTGATTTTATTAG AGCAACAACTACCCAGCTTTGATACGGCGAAATTTTGCCAGTGGATGCAAAGCTTTGAGCAACCGATTCCAGTGATTTTA ATTGCGGCCCAAACCCGTAAGGTGGCCCCGGCAGATCGAGAAACGGCGATCGCCAATGGAGCAGCGGATCTTTTACCTCA ATTTGATCTCAATAGCATTGCGATCGAAGCCGTCAGTGGCCTCAAAACCGTCGCCAAGGTACTGGGAAATATCAACATCG TCAACAATACCCTCGTCACCTGCATCATGGAACTGAAACGGGAGCTAGAAGCGGGTCAAGAATTTCCCGTTGCTCCCCCT GCCGTGTCTTCAAATACACCTGAACTAAAACCGCCCACGCCGACTGTTGCCTCACCACCACCGGAAGCCCCTGCCCCCAA AACCCGTAAATATCGAGGCCGCGATTATTAA
Upstream 100 bases:
>100_bases CGTTGCATCACTTGGGTTTCTACCCTGTGGCGATCGCCCCTCCGCACACCCCTATGGATATTCATAAAAACCAATGCTGA TGAACATTGCCGATAAAATC
Downstream 100 bases:
>100_bases GCTCCAGAGCGATCAATAAAAACCATGGCATAATAGCTTCGCCTCAGGTTAAGGCTTTGCACCATGGATCAAGTTTGGCG AGATAAATTTTGGGTACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MILHQAELQGNIWEKILHSQGLQSVILPFSVDLQGELLDLAAAQQSLPNLILLEQQLPSFDTAKFCQWMQSFEQPIPVIL IAAQTRKVAPADRETAIANGAADLLPQFDLNSIAIEAVSGLKTVAKVLGNINIVNNTLVTCIMELKRELEAGQEFPVAPP AVSSNTPELKPPTPTVASPPPEAPAPKTRKYRGRDY
Sequences:
>Translated_196_residues MILHQAELQGNIWEKILHSQGLQSVILPFSVDLQGELLDLAAAQQSLPNLILLEQQLPSFDTAKFCQWMQSFEQPIPVIL IAAQTRKVAPADRETAIANGAADLLPQFDLNSIAIEAVSGLKTVAKVLGNINIVNNTLVTCIMELKRELEAGQEFPVAPP AVSSNTPELKPPTPTVASPPPEAPAPKTRKYRGRDY >Mature_196_residues MILHQAELQGNIWEKILHSQGLQSVILPFSVDLQGELLDLAAAQQSLPNLILLEQQLPSFDTAKFCQWMQSFEQPIPVIL IAAQTRKVAPADRETAIANGAADLLPQFDLNSIAIEAVSGLKTVAKVLGNINIVNNTLVTCIMELKRELEAGQEFPVAPP AVSSNTPELKPPTPTVASPPPEAPAPKTRKYRGRDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21322; Mature: 21322
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILHQAELQGNIWEKILHSQGLQSVILPFSVDLQGELLDLAAAQQSLPNLILLEQQLPSF CCCCCHHHCCHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHCCCC DTAKFCQWMQSFEQPIPVILIAAQTRKVAPADRETAIANGAADLLPQFDLNSIAIEAVSG CHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCHHHHCCCCCCHHHHHHHHHH LKTVAKVLGNINIVNNTLVTCIMELKRELEAGQEFPVAPPAVSSNTPELKPPTPTVASPP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEAPAPKTRKYRGRDY CCCCCCCCCCCCCCCC >Mature Secondary Structure MILHQAELQGNIWEKILHSQGLQSVILPFSVDLQGELLDLAAAQQSLPNLILLEQQLPSF CCCCCHHHCCHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHCCCC DTAKFCQWMQSFEQPIPVILIAAQTRKVAPADRETAIANGAADLLPQFDLNSIAIEAVSG CHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCHHHHCCCCCCHHHHHHHHHH LKTVAKVLGNINIVNNTLVTCIMELKRELEAGQEFPVAPPAVSSNTPELKPPTPTVASPP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEAPAPKTRKYRGRDY CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA