| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is gpmB [H]
Identifier: 170079154
GI number: 170079154
Start: 2668883
End: 2670217
Strand: Reverse
Name: gpmB [H]
Synonym: SYNPCC7002_A2560
Alternate gene names: 170079154
Gene position: 2670217-2668883 (Counterclockwise)
Preceding gene: 170079157
Following gene: 170079153
Centisome position: 88.77
GC content: 52.88
Gene sequence:
>1335_bases GTGGCAACCCGCGTCATAATCGTGCGTCACGGACAAAGTAGCTATAACGCCCTCAAAATGATCCAGGGCCGTTGTGATGA ATCAGTACTCACCGACAAAGGCTGTGCCGACGCCGCCACCGTAGGCCAAACCCTCCAGGGCATCGACTTTGCTGCAATCT ATTGCAGCCCCCTCCAACGGGCCAAACAAACCGCTGAAATTATCCACCAGCACCTCGACAAAGCCCCCGCCCCCATCACC AGTGAGGGTCTGCTAGAAATTAATTTGCCCCAGTGGGAAAAACTCCTCAAAAGTGACGTCAAAGAACAATATCCAGAAGC CTATCGCCTCTGGCACGAAAATCCCGCTGAATTTGTGATGACCCATGCTGATGGGAGCGAACACTCTCCGGTTAAAGACC TCTATGACCAAGCCCGGCAATTTTGGCAGGAAATCCTCGCAAAACACCAAGAGGAGACTGTCTTAATCGTTGCCCACAAT GGCATCAACCGCTGTTTATTGATGAGTGCGGCGGGCATCCCCCCCAGCAAATACCAGAGCATTCAACAATCCAACTGCTG CATCAATGTGCTGAATTTTGTCGGCCAGTTGGGAGACATTGTCCAATTCGAATCAATTAACCAAACGGCCCACCTCGGCT TGCCCCTCCCCACCTATCGTCCTGGCCACAAAGGCCTCCGTTTACTACTGGTGCGCCACGGGGAAACCAACTGGAATAAA GAAGGGCGTTTCCAAGGCACCATGGATATTCCGTTAAATGAGAATGGCCAAGCCCAAGCCGCTAAAGCCCGTGAATTTCT TAAGGATGTGACCCTGCATTTCGGTATGACTAGCCCCATGAGTCGGCCCAAAGAAACCGCTGAAATCATTCTGCAAGCCC ACCCTGGGGTGGTGTTGGGTACCCACCCTAAATTAGAAGAAATTGGCCATGGCCTCTGGGAAGGCAAACTAGAAGCTGAC ATTGAAGCGGGCTTCCCCGGCATGCTGGCCCAGTGGAAAACCAAGCCAGAAACCGTCCAGATGCCAGAGGGGGAAAATCT CCAACAGGTGTGGGACCGGGCCAACGAAGCCTGGGATGAGATTGTGGCGCAGTATAGCCAAACCCCGAACCAAGTGGGTT TAGTTGTTGCCCATGATGCCATTAACAAGGTGATTCTCTGTCGCTTGATGGGACTACAGCCCCAGGATATTTGGGCGGTG AAACAGGGGAACTGTGCAGTGACGGTCATTGACTATCTCCAGGGGGCAGACAGTGAACCGGTACTCCAGGCGCTAAATAT TACGTCGCACCTTGGCTTTGGGGTGATTGATCAGACGGCAGCCGGAGCTTTGTAA
Upstream 100 bases:
>100_bases GCCCGAACTTCACCTTTTCCCCTGACCCCGAACCAGATACTATGGTGTAGGCAAAAATCCCCCCTCGCAACACCACACCC AAATAATGGAGGAAACCAAG
Downstream 100 bases:
>100_bases GCCTGGGAAAAAATGAGGGGCGATCGCCATCCCCTATAATCAAGTCTGGAAAATTTTTGTAGCAAAAACAACGAGCGTGT GTAATGGGTAAAATTGCGTG
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MATRVIIVRHGQSSYNALKMIQGRCDESVLTDKGCADAATVGQTLQGIDFAAIYCSPLQRAKQTAEIIHQHLDKAPAPIT SEGLLEINLPQWEKLLKSDVKEQYPEAYRLWHENPAEFVMTHADGSEHSPVKDLYDQARQFWQEILAKHQEETVLIVAHN GINRCLLMSAAGIPPSKYQSIQQSNCCINVLNFVGQLGDIVQFESINQTAHLGLPLPTYRPGHKGLRLLLVRHGETNWNK EGRFQGTMDIPLNENGQAQAAKAREFLKDVTLHFGMTSPMSRPKETAEIILQAHPGVVLGTHPKLEEIGHGLWEGKLEAD IEAGFPGMLAQWKTKPETVQMPEGENLQQVWDRANEAWDEIVAQYSQTPNQVGLVVAHDAINKVILCRLMGLQPQDIWAV KQGNCAVTVIDYLQGADSEPVLQALNITSHLGFGVIDQTAAGAL
Sequences:
>Translated_444_residues MATRVIIVRHGQSSYNALKMIQGRCDESVLTDKGCADAATVGQTLQGIDFAAIYCSPLQRAKQTAEIIHQHLDKAPAPIT SEGLLEINLPQWEKLLKSDVKEQYPEAYRLWHENPAEFVMTHADGSEHSPVKDLYDQARQFWQEILAKHQEETVLIVAHN GINRCLLMSAAGIPPSKYQSIQQSNCCINVLNFVGQLGDIVQFESINQTAHLGLPLPTYRPGHKGLRLLLVRHGETNWNK EGRFQGTMDIPLNENGQAQAAKAREFLKDVTLHFGMTSPMSRPKETAEIILQAHPGVVLGTHPKLEEIGHGLWEGKLEAD IEAGFPGMLAQWKTKPETVQMPEGENLQQVWDRANEAWDEIVAQYSQTPNQVGLVVAHDAINKVILCRLMGLQPQDIWAV KQGNCAVTVIDYLQGADSEPVLQALNITSHLGFGVIDQTAAGAL >Mature_443_residues ATRVIIVRHGQSSYNALKMIQGRCDESVLTDKGCADAATVGQTLQGIDFAAIYCSPLQRAKQTAEIIHQHLDKAPAPITS EGLLEINLPQWEKLLKSDVKEQYPEAYRLWHENPAEFVMTHADGSEHSPVKDLYDQARQFWQEILAKHQEETVLIVAHNG INRCLLMSAAGIPPSKYQSIQQSNCCINVLNFVGQLGDIVQFESINQTAHLGLPLPTYRPGHKGLRLLLVRHGETNWNKE GRFQGTMDIPLNENGQAQAAKAREFLKDVTLHFGMTSPMSRPKETAEIILQAHPGVVLGTHPKLEEIGHGLWEGKLEADI EAGFPGMLAQWKTKPETVQMPEGENLQQVWDRANEAWDEIVAQYSQTPNQVGLVVAHDAINKVILCRLMGLQPQDIWAVK QGNCAVTVIDYLQGADSEPVLQALNITSHLGFGVIDQTAAGAL
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=217, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786857, Length=205, Percent_Identity=25.8536585365854, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 49139; Mature: 49007
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRVIIVRHGQSSYNALKMIQGRCDESVLTDKGCADAATVGQTLQGIDFAAIYCSPLQR CCCEEEEEECCCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCCEEHHHHHHHHH AKQTAEIIHQHLDKAPAPITSEGLLEINLPQWEKLLKSDVKEQYPEAYRLWHENPAEFVM HHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHCCCCHHEEE THADGSEHSPVKDLYDQARQFWQEILAKHQEETVLIVAHNGINRCLLMSAAGIPPSKYQS EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHH IQQSNCCINVLNFVGQLGDIVQFESINQTAHLGLPLPTYRPGHKGLRLLLVRHGETNWNK HHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCC EGRFQGTMDIPLNENGQAQAAKAREFLKDVTLHFGMTSPMSRPKETAEIILQAHPGVVLG CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEC THPKLEEIGHGLWEGKLEADIEAGFPGMLAQWKTKPETVQMPEGENLQQVWDRANEAWDE CCCCHHHHCCCCCCCCEEECCCCCCCCHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHH IVAQYSQTPNQVGLVVAHDAINKVILCRLMGLQPQDIWAVKQGNCAVTVIDYLQGADSEP HHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHCCCCCCH VLQALNITSHLGFGVIDQTAAGAL HHHHHHHHHHCCCCCHHHHHCCCC >Mature Secondary Structure ATRVIIVRHGQSSYNALKMIQGRCDESVLTDKGCADAATVGQTLQGIDFAAIYCSPLQR CCEEEEEECCCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCCEEHHHHHHHHH AKQTAEIIHQHLDKAPAPITSEGLLEINLPQWEKLLKSDVKEQYPEAYRLWHENPAEFVM HHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHCCCCHHEEE THADGSEHSPVKDLYDQARQFWQEILAKHQEETVLIVAHNGINRCLLMSAAGIPPSKYQS EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHH IQQSNCCINVLNFVGQLGDIVQFESINQTAHLGLPLPTYRPGHKGLRLLLVRHGETNWNK HHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCC EGRFQGTMDIPLNENGQAQAAKAREFLKDVTLHFGMTSPMSRPKETAEIILQAHPGVVLG CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEC THPKLEEIGHGLWEGKLEADIEAGFPGMLAQWKTKPETVQMPEGENLQQVWDRANEAWDE CCCCHHHHCCCCCCCCEEECCCCCCCCHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHH IVAQYSQTPNQVGLVVAHDAINKVILCRLMGLQPQDIWAVKQGNCAVTVIDYLQGADSEP HHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHCCCCCCH VLQALNITSHLGFGVIDQTAAGAL HHHHHHHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA