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The map label for this gene is fabD [H]

Identifier: 170079153

GI number: 170079153

Start: 2667921

End: 2668799

Strand: Reverse

Name: fabD [H]

Synonym: SYNPCC7002_A2559

Alternate gene names: 170079153

Gene position: 2668799-2667921 (Counterclockwise)

Preceding gene: 170079154

Following gene: 170079152

Centisome position: 88.72

GC content: 54.15

Gene sequence:

>879_bases
ATGGGTAAAATTGCGTGGGTCTTTCCGGGCCAAGGATCTCAAACGGTGGGCATGGGTGTCGATCTCGCCGAACATCCCGT
CGCCAAAGCAAGATTTGCTGAAGCAGAGGCAATCCTCGGTTGGTCAATTCTCGAAAAATGCCAGGGGGATGAAGCGACCC
TCTCCCGCACCCTTTACACCCAACCCTGTCTCTATGTGCTAGAGGCAATTCTCTGCGATCGCTACCGGGAGAAAGCGCCC
CAGGTAGACTTTATGGCGGGCCACAGCCTCGGTGAATATTCCGCCCTCTATGCGGCTGGGGTCTATGATTTTGCCGCTGG
TTTGCAATTAGTGCAAAAGCGCGCCCAACTGATGGATCAAGCGTCTGGGGGGAAAATGGCGGCCCTGATGAAGTTTGACC
GTACTGAATTAATGGAAAAAATTGCGGCGACCGAGGGAGTGACCCTCGCCAACGACAACAGCGAACAACAAGTTGTCATT
TCCGGTACCCCAGAAGCCGTTGATGCGATTATGAATGGCGTTAAAACCAAGCGGGCGATCGCCCTGAATGTTTCTGGTGC
GTTCCATTCCCCGTTTATGGCCGAAGCCGCCGCCCAATTTGAAGCGATTCTCGATGCCGTTACCTTTGCCGATGCCCAGG
TACCCGTACTGTCTAATGTCGATCCCCAACCGGAAACCCAAGCAGCCGCCCTCAAGGAGCGCCTCAAGGCCCAAATGACC
GGTTCTGTCCGTTGGCTCGAAATCATGCAGCAACTGAGCGCCCTAGAAGTTGCTGAGGCCGTAGAAATTGGCCCCGGTAA
AGTATTAACGGGTTTAATTAAGCGCACCTGCAAAGACATGGCCACGGCAAACATTGATACCCTCGCCAGTATTGGCTAG

Upstream 100 bases:

>100_bases
CAGCCGGAGCTTTGTAAGCCTGGGAAAAAATGAGGGGCGATCGCCATCCCCTATAATCAAGTCTGGAAAATTTTTGTAGC
AAAAACAACGAGCGTGTGTA

Downstream 100 bases:

>100_bases
GCTCAAGGCATACCAAACCACCGCGCCAAAAGGGAACCATGATTTATTTAGATTCGGCGATCGCCACCGAAGCCACCGAA
GCCATGGCCTGGGGTTGGGT

Product: malonyl CoA-acyl carrier protein transacylase

Products: NA

Alternate protein names: MCT [H]

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MGKIAWVFPGQGSQTVGMGVDLAEHPVAKARFAEAEAILGWSILEKCQGDEATLSRTLYTQPCLYVLEAILCDRYREKAP
QVDFMAGHSLGEYSALYAAGVYDFAAGLQLVQKRAQLMDQASGGKMAALMKFDRTELMEKIAATEGVTLANDNSEQQVVI
SGTPEAVDAIMNGVKTKRAIALNVSGAFHSPFMAEAAAQFEAILDAVTFADAQVPVLSNVDPQPETQAAALKERLKAQMT
GSVRWLEIMQQLSALEVAEAVEIGPGKVLTGLIKRTCKDMATANIDTLASIG

Sequences:

>Translated_292_residues
MGKIAWVFPGQGSQTVGMGVDLAEHPVAKARFAEAEAILGWSILEKCQGDEATLSRTLYTQPCLYVLEAILCDRYREKAP
QVDFMAGHSLGEYSALYAAGVYDFAAGLQLVQKRAQLMDQASGGKMAALMKFDRTELMEKIAATEGVTLANDNSEQQVVI
SGTPEAVDAIMNGVKTKRAIALNVSGAFHSPFMAEAAAQFEAILDAVTFADAQVPVLSNVDPQPETQAAALKERLKAQMT
GSVRWLEIMQQLSALEVAEAVEIGPGKVLTGLIKRTCKDMATANIDTLASIG
>Mature_291_residues
GKIAWVFPGQGSQTVGMGVDLAEHPVAKARFAEAEAILGWSILEKCQGDEATLSRTLYTQPCLYVLEAILCDRYREKAPQ
VDFMAGHSLGEYSALYAAGVYDFAAGLQLVQKRAQLMDQASGGKMAALMKFDRTELMEKIAATEGVTLANDNSEQQVVIS
GTPEAVDAIMNGVKTKRAIALNVSGAFHSPFMAEAAAQFEAILDAVTFADAQVPVLSNVDPQPETQAAALKERLKAQMTG
SVRWLEIMQQLSALEVAEAVEIGPGKVLTGLIKRTCKDMATANIDTLASIG

Specific function: Fatty acid biosynthesis. [C]

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabD family [H]

Homologues:

Organism=Homo sapiens, GI51243059, Length=314, Percent_Identity=30.2547770700637, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI27477045, Length=106, Percent_Identity=38.6792452830189, Blast_Score=72, Evalue=6e-13,
Organism=Escherichia coli, GI1787334, Length=302, Percent_Identity=39.0728476821192, Blast_Score=168, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI71984332, Length=297, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17550940, Length=295, Percent_Identity=27.1186440677966, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24665753, Length=310, Percent_Identity=31.2903225806452, Blast_Score=119, Evalue=2e-27,

Paralogues:

None

Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR014043
- InterPro:   IPR016035
- InterPro:   IPR004410
- InterPro:   IPR016036 [H]

Pfam domain/function: PF00698 Acyl_transf_1 [H]

EC number: =2.3.1.39 [H]

Molecular weight: Translated: 31230; Mature: 31099

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIAWVFPGQGSQTVGMGVDLAEHPVAKARFAEAEAILGWSILEKCQGDEATLSRTLYT
CCCEEEEECCCCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QPCLYVLEAILCDRYREKAPQVDFMAGHSLGEYSALYAAGVYDFAAGLQLVQKRAQLMDQ
HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGGKMAALMKFDRTELMEKIAATEGVTLANDNSEQQVVISGTPEAVDAIMNGVKTKRAI
CCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCHHHHHHHHHCHHHCEEE
ALNVSGAFHSPFMAEAAAQFEAILDAVTFADAQVPVLSNVDPQPETQAAALKERLKAQMT
EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHC
GSVRWLEIMQQLSALEVAEAVEIGPGKVLTGLIKRTCKDMATANIDTLASIG
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure 
GKIAWVFPGQGSQTVGMGVDLAEHPVAKARFAEAEAILGWSILEKCQGDEATLSRTLYT
CCEEEEECCCCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QPCLYVLEAILCDRYREKAPQVDFMAGHSLGEYSALYAAGVYDFAAGLQLVQKRAQLMDQ
HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGGKMAALMKFDRTELMEKIAATEGVTLANDNSEQQVVISGTPEAVDAIMNGVKTKRAI
CCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCHHHHHHHHHCHHHCEEE
ALNVSGAFHSPFMAEAAAQFEAILDAVTFADAQVPVLSNVDPQPETQAAALKERLKAQMT
EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHC
GSVRWLEIMQQLSALEVAEAVEIGPGKVLTGLIKRTCKDMATANIDTLASIG
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]