| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079117
Identifier: 170079117
GI number: 170079117
Start: 2631148
End: 2631564
Strand: Direct
Name: 170079117
Synonym: SYNPCC7002_A2522
Alternate gene names: NA
Gene position: 2631148-2631564 (Clockwise)
Preceding gene: 170079115
Following gene: 170079118
Centisome position: 87.47
GC content: 49.4
Gene sequence:
>417_bases ATGGCAGAACAATGTGATGCAAGTTTGAAAGTCTGTGCGCAGAATCTTGGCCTCGACCGAATTGATCGCCATGTGTTTAT CTGTGCCGATCAAACGAAGCCCAAATGCTGTGATAAGCAGGCCAGCATTGACGCTTGGAATTATCTCAAAAAACGCCTCA AAGAATTGGGATTAGATGCTCCCAGTGACGCTTCACCCCACATTTTCCGCACGAAAGCGAACTGTCTCCGGGTCTGTAGT CAGGGGCCGATTTTGGTGGTCTATCCCGATGGCATTTGGTATCACAGTGCCACACCAGCGGTCATTGAACGGATTATTCA AGAGCATTTAATCGGCGATCGCCCCGTCCAGGATTATGTATTTATGGCCCACCCCCTACCCAAACCATCACCAGTAAACC CCGTCCCAAATCCCTAA
Upstream 100 bases:
>100_bases ATTTTTGCTTCCCTCTAGTGTATCCTTCAATGTTCCTTCCTTCGCCGCTGGATCGCCTGACTCGGTAAAATTGTTCGCGT CCCCCTAGAGAATCTTGGTA
Downstream 100 bases:
>100_bases TCCCAGCCAAAATTCCTTTGCTAAGATTTGGCTAACCCTGATCTTTGCGACCCTATTCCTGCCATGAGCGATTTTCCTAA TCCCCAAGGTACGACTCTAC
Product: ferredoxin
Products: NA
Alternate protein names: Ferredoxin-Like Protein; Ferredoxin 2Fe-2S; Ferredoxin 2fe-2s Protein; Fe2-S2-Type Ferredoxin; Ferredoxin Like Protein; Sucraseferredoxin Family Protein; Ferredoxin 2Fe-2S Protein; Ferredoxin Protein; Ferredoxin-Like; 2Fe-2S Ferredoxin; Ferredoxin 2fe-2s
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAEQCDASLKVCAQNLGLDRIDRHVFICADQTKPKCCDKQASIDAWNYLKKRLKELGLDAPSDASPHIFRTKANCLRVCS QGPILVVYPDGIWYHSATPAVIERIIQEHLIGDRPVQDYVFMAHPLPKPSPVNPVPNP
Sequences:
>Translated_138_residues MAEQCDASLKVCAQNLGLDRIDRHVFICADQTKPKCCDKQASIDAWNYLKKRLKELGLDAPSDASPHIFRTKANCLRVCS QGPILVVYPDGIWYHSATPAVIERIIQEHLIGDRPVQDYVFMAHPLPKPSPVNPVPNP >Mature_137_residues AEQCDASLKVCAQNLGLDRIDRHVFICADQTKPKCCDKQASIDAWNYLKKRLKELGLDAPSDASPHIFRTKANCLRVCSQ GPILVVYPDGIWYHSATPAVIERIIQEHLIGDRPVQDYVFMAHPLPKPSPVNPVPNP
Specific function: Unknown
COG id: COG3411
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15430; Mature: 15299
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQCDASLKVCAQNLGLDRIDRHVFICADQTKPKCCDKQASIDAWNYLKKRLKELGLDA CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC PSDASPHIFRTKANCLRVCSQGPILVVYPDGIWYHSATPAVIERIIQEHLIGDRPVQDYV CCCCCCCEEEHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHCCCCCCHHEE FMAHPLPKPSPVNPVPNP EEECCCCCCCCCCCCCCC >Mature Secondary Structure AEQCDASLKVCAQNLGLDRIDRHVFICADQTKPKCCDKQASIDAWNYLKKRLKELGLDA CCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC PSDASPHIFRTKANCLRVCSQGPILVVYPDGIWYHSATPAVIERIIQEHLIGDRPVQDYV CCCCCCCEEEHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHCCCCCCHHEE FMAHPLPKPSPVNPVPNP EEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA