| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079087
Identifier: 170079087
GI number: 170079087
Start: 2597602
End: 2598126
Strand: Reverse
Name: 170079087
Synonym: SYNPCC7002_A2492
Alternate gene names: NA
Gene position: 2598126-2597602 (Counterclockwise)
Preceding gene: 170079088
Following gene: 170079085
Centisome position: 86.37
GC content: 47.24
Gene sequence:
>525_bases ATGCCAATGAAAACGCCTCAAACTTTCTCTCTCCCTTGGTACCGCTGGCTCAATAGCCAATATGTTGTGCGGTTGTTAGA AACGGTTCAAGATCTGATTGTGATTGGCCTGTGTGTTGGGCTGTTTAGCTTTATGGTGTTGCAACTGCGGGAGATGGTGC TTTCGTTGTTGCCGCCTCTGCAATTTCAGACGGTTACTTCTGATATTCTCTTTTTACTGATTTTGGTAGAGCTGTTTCGT TTGCTGATTATCTACCTCCAAGAACACCGGGTTTCTATCGGTGTGGCGGTGGAAGTGTCGATTGTTTCTGTGCTCCGGGA AATTATTGTACGCGGTGTTTTAGAAACGCCTTGGACACAGGTTTTGGTTGCTTGTATTTTTCTGTTGGTTTTAGGGGCGC TGTTGGTGATTCGCGTTTGGTTGCCACCGACCTTTGACGGGATTGATCCGGAGCAAGTCGTCTCACAGCGGCACCGTTCT CGGCGTCATCCCCAAGAAAAAGAGAATCATACGTTGATTTCCTAG
Upstream 100 bases:
>100_bases ATGGTCAAGCTGAAACCAATCAGAGCGTATTCCACCTTATTTCGCTGCACGGCCCAAGCGACGCGGGTTCATCCAGCAAC GTAGTTTTTAAATTAATTTA
Downstream 100 bases:
>100_bases GGAAGTATTTTATCGGCAGCACCGGGTTTAAGTAATAGATGACTCGGTGCGATCGCCTTTAATTTGTAGAGCCCAATTGC GGGTCAAGATCATCCGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MPMKTPQTFSLPWYRWLNSQYVVRLLETVQDLIVIGLCVGLFSFMVLQLREMVLSLLPPLQFQTVTSDILFLLILVELFR LLIIYLQEHRVSIGVAVEVSIVSVLREIIVRGVLETPWTQVLVACIFLLVLGALLVIRVWLPPTFDGIDPEQVVSQRHRS RRHPQEKENHTLIS
Sequences:
>Translated_174_residues MPMKTPQTFSLPWYRWLNSQYVVRLLETVQDLIVIGLCVGLFSFMVLQLREMVLSLLPPLQFQTVTSDILFLLILVELFR LLIIYLQEHRVSIGVAVEVSIVSVLREIIVRGVLETPWTQVLVACIFLLVLGALLVIRVWLPPTFDGIDPEQVVSQRHRS RRHPQEKENHTLIS >Mature_173_residues PMKTPQTFSLPWYRWLNSQYVVRLLETVQDLIVIGLCVGLFSFMVLQLREMVLSLLPPLQFQTVTSDILFLLILVELFRL LIIYLQEHRVSIGVAVEVSIVSVLREIIVRGVLETPWTQVLVACIFLLVLGALLVIRVWLPPTFDGIDPEQVVSQRHRSR RHPQEKENHTLIS
Specific function: Unknown
COG id: COG3431
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20095; Mature: 19964
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKTPQTFSLPWYRWLNSQYVVRLLETVQDLIVIGLCVGLFSFMVLQLREMVLSLLPPL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QFQTVTSDILFLLILVELFRLLIIYLQEHRVSIGVAVEVSIVSVLREIIVRGVLETPWTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLVACIFLLVLGALLVIRVWLPPTFDGIDPEQVVSQRHRSRRHPQEKENHTLIS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PMKTPQTFSLPWYRWLNSQYVVRLLETVQDLIVIGLCVGLFSFMVLQLREMVLSLLPPL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QFQTVTSDILFLLILVELFRLLIIYLQEHRVSIGVAVEVSIVSVLREIIVRGVLETPWTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLVACIFLLVLGALLVIRVWLPPTFDGIDPEQVVSQRHRSRRHPQEKENHTLIS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA