Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is cdsA [H]

Identifier: 170079074

GI number: 170079074

Start: 2583681

End: 2584559

Strand: Direct

Name: cdsA [H]

Synonym: SYNPCC7002_A2479

Alternate gene names: 170079074

Gene position: 2583681-2584559 (Clockwise)

Preceding gene: 170079073

Following gene: 170079076

Centisome position: 85.89

GC content: 52.45

Gene sequence:

>879_bases
ATGTCTTTGTCGCGAATCATTAGTGGTGTAGTGGCGATCGCCCTGGCCTTGACCCTCATTGTCTTGGGGGGATGGTACTT
TACCTTGGGAATGGGCATCCTCGTCTTTCTCGGCCAACAAGAATACTTCCGGATGGTTCGGGCAAAGGGATTAGCACCAG
CGGTAAAAACCACCCTAGTCGTGTCTCAATTGTTGCTTGTGATTGCGACCTTGAGTCCGAGCCTTGCTGACGCCCTCTTT
CCCCTCGCCGGGACGTTTATCTGCTTTTATCTTCTATTCCAGCCCAAAATGGCAACTATTGCCGATCTCTCCACCTCAAT
TTTGGGACTCTTTTACGGCGGTTATATGCCCAGCTACTGGGTACGACTGAGGATGGGCAGCCTCGCAGAAACGGAAGCCG
TGAGTAACTTACCCTTCTATGGCTATCTTCCGGCTTCCTGGGGAGAGTGGTTTAATTTGCCCCAGGCCCTCAAGTTGACC
TTTGTCGTGATGGTTTGTATTTGGGCCGCCGACATTGGGGCTTACTTCATGGGCAAATGGCTAGGGAAAACGAAGCTCTC
GGCCATTAGCCCCAAAAAGACCGTCGAAGGGGCTGTATTTGGAGCCTTAGGGACTATCTTCGTGGCGATCGCCGGGGCTT
GGTATCTCGATTGGTCATGGTGGCCCATCACGGGAACACTTTTGGGGCTGCTCATCAGCGTCACCACCCTACTCGGAGAC
CTAACCGAATCAATCATGAAACGGGATGCGGGCTTTAAGGATTCTGGACAGTTGATTCCGGGCCACGGCGGAATCCTCGA
CCGCACTGATAGCTATGTTTTTACTGCGCCAGTCGTTTATCTATTTGTGACCATTGTCCTGCCGATCTTCGGCTCCTAA

Upstream 100 bases:

>100_bases
CCGTGAATCTTGTTAACGTTTGATAAAATTTTCTTTAACAACCCTGGGGAACCCGCTTTAATTCTTTTATTGAAGCCCCC
AGCCGTGAGCTTGCAGTTTT

Downstream 100 bases:

>100_bases
ACAGCACCTCTTAAAAAGTATGGGTCATCAAGCAAAAGAGATCTCCACCCATTCGGGAGATCCGTGGCAGTCAGTCCGAA
AATTGAAGAGAAATTCAAAA

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSLSRIISGVVAIALALTLIVLGGWYFTLGMGILVFLGQQEYFRMVRAKGLAPAVKTTLVVSQLLLVIATLSPSLADALF
PLAGTFICFYLLFQPKMATIADLSTSILGLFYGGYMPSYWVRLRMGSLAETEAVSNLPFYGYLPASWGEWFNLPQALKLT
FVVMVCIWAADIGAYFMGKWLGKTKLSAISPKKTVEGAVFGALGTIFVAIAGAWYLDWSWWPITGTLLGLLISVTTLLGD
LTESIMKRDAGFKDSGQLIPGHGGILDRTDSYVFTAPVVYLFVTIVLPIFGS

Sequences:

>Translated_292_residues
MSLSRIISGVVAIALALTLIVLGGWYFTLGMGILVFLGQQEYFRMVRAKGLAPAVKTTLVVSQLLLVIATLSPSLADALF
PLAGTFICFYLLFQPKMATIADLSTSILGLFYGGYMPSYWVRLRMGSLAETEAVSNLPFYGYLPASWGEWFNLPQALKLT
FVVMVCIWAADIGAYFMGKWLGKTKLSAISPKKTVEGAVFGALGTIFVAIAGAWYLDWSWWPITGTLLGLLISVTTLLGD
LTESIMKRDAGFKDSGQLIPGHGGILDRTDSYVFTAPVVYLFVTIVLPIFGS
>Mature_291_residues
SLSRIISGVVAIALALTLIVLGGWYFTLGMGILVFLGQQEYFRMVRAKGLAPAVKTTLVVSQLLLVIATLSPSLADALFP
LAGTFICFYLLFQPKMATIADLSTSILGLFYGGYMPSYWVRLRMGSLAETEAVSNLPFYGYLPASWGEWFNLPQALKLTF
VVMVCIWAADIGAYFMGKWLGKTKLSAISPKKTVEGAVFGALGTIFVAIAGAWYLDWSWWPITGTLLGLLISVTTLLGDL
TESIMKRDAGFKDSGQLIPGHGGILDRTDSYVFTAPVVYLFVTIVLPIFGS

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=131, Percent_Identity=45.8015267175573, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787677, Length=118, Percent_Identity=44.0677966101695, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 31716; Mature: 31585

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLSRIISGVVAIALALTLIVLGGWYFTLGMGILVFLGQQEYFRMVRAKGLAPAVKTTLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH
VSQLLLVIATLSPSLADALFPLAGTFICFYLLFQPKMATIADLSTSILGLFYGGYMPSYW
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH
VRLRMGSLAETEAVSNLPFYGYLPASWGEWFNLPQALKLTFVVMVCIWAADIGAYFMGKW
HHHHHCCHHHHHHHHCCCCEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGKTKLSAISPKKTVEGAVFGALGTIFVAIAGAWYLDWSWWPITGTLLGLLISVTTLLGD
HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LTESIMKRDAGFKDSGQLIPGHGGILDRTDSYVFTAPVVYLFVTIVLPIFGS
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]