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The map label for this gene is 170079066

Identifier: 170079066

GI number: 170079066

Start: 2575518

End: 2576396

Strand: Direct

Name: 170079066

Synonym: SYNPCC7002_A2471

Alternate gene names: NA

Gene position: 2575518-2576396 (Clockwise)

Preceding gene: 170079063

Following gene: 170079067

Centisome position: 85.62

GC content: 55.06

Gene sequence:

>879_bases
ATGGAAGACTTACTCACCGTAGCCCGCACAACCTATCGCCCCCTAGAATGCCGTCCCGACAGTTATAGAGGTTGGTATCA
GCAGGGACAACTCTGCTGGCTCGAAGGCAATGTCGATGAAGCGTTGCTCTGCTACCATCGCGCCCTGGAATATTATCCCA
ATGACTATTGGGCCTGGTATCATCTGGCGATCGCCCATGAAAAATTAGGCCATGTGGATGAGGCGATCACCGCCTACCAA
CGGGCCTGTGCCATTGGCCCAGAAAACTATTGGTCTTGGTATGACCAGGGTTGCCTCTACATGGAAGTCCTCCAGGTTTA
CACCCAGGCGATCGCCTGTTTTGAAAAAGCCCTCGCCGCCCAACCCAACGACTATTGGGCGATTTATCGTCAAGGGGAAT
GTTGGCGACTCCTGGGCCGTCAGGATCGTGCTGTGACTGCCTATGACCGTGCCCTCGAATTTCGCCCTGGAGATTATTGG
TGTTGGTATCGTCGAGGCGATGCCCTCCAAGCTTGGGGAAAACCAGAAGCGGCCCTGGCCAGCTACGACCAAGCCCTCAA
CGCAAAACCCAATGATTTTTGGGCCTGGTACCAACGGGGAAACACCCTCGCAAGTTTGGGGAATTACCCAGCGGCGATCG
CCGCCTTTACCCAAGCCCTAATTGATGCCCCCGACGATGCAGAAACTTGGTATGCCCAAGCCCGTTGTTTGGCCCAGATC
GGTGATGGCCAAGGGGCTTTTCGGAGTTTAGAAAAGGCGATCGCCCTCGACCCGCTGACCTATTTCCCCCAAGCAGAAAC
GGCTCCCTGTTTTACACCGCTACGCTCCTTAGCTTCTTGGGAAAATCTCCAACAGTTAGCTCAGCCCACCCAAGCCTAG

Upstream 100 bases:

>100_bases
AAGCAGGTCAAATCCAGACTTCAGATTACCTTAACAAATCCGTTATCTTAGATATAGAAAAATTATTAATCTGCCAAAAA
ACGCAAGATTACCGCCTGGG

Downstream 100 bases:

>100_bases
ACCATGGTTTTACTGGCGGGCGTTGATGAAGTGGGCCGGGGCTGTTTGTTTGGGCCGGTGGTGGCCGCGGTGGTGGTGGT
TAATACAATCCAAGAACAAG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MEDLLTVARTTYRPLECRPDSYRGWYQQGQLCWLEGNVDEALLCYHRALEYYPNDYWAWYHLAIAHEKLGHVDEAITAYQ
RACAIGPENYWSWYDQGCLYMEVLQVYTQAIACFEKALAAQPNDYWAIYRQGECWRLLGRQDRAVTAYDRALEFRPGDYW
CWYRRGDALQAWGKPEAALASYDQALNAKPNDFWAWYQRGNTLASLGNYPAAIAAFTQALIDAPDDAETWYAQARCLAQI
GDGQGAFRSLEKAIALDPLTYFPQAETAPCFTPLRSLASWENLQQLAQPTQA

Sequences:

>Translated_292_residues
MEDLLTVARTTYRPLECRPDSYRGWYQQGQLCWLEGNVDEALLCYHRALEYYPNDYWAWYHLAIAHEKLGHVDEAITAYQ
RACAIGPENYWSWYDQGCLYMEVLQVYTQAIACFEKALAAQPNDYWAIYRQGECWRLLGRQDRAVTAYDRALEFRPGDYW
CWYRRGDALQAWGKPEAALASYDQALNAKPNDFWAWYQRGNTLASLGNYPAAIAAFTQALIDAPDDAETWYAQARCLAQI
GDGQGAFRSLEKAIALDPLTYFPQAETAPCFTPLRSLASWENLQQLAQPTQA
>Mature_292_residues
MEDLLTVARTTYRPLECRPDSYRGWYQQGQLCWLEGNVDEALLCYHRALEYYPNDYWAWYHLAIAHEKLGHVDEAITAYQ
RACAIGPENYWSWYDQGCLYMEVLQVYTQAIACFEKALAAQPNDYWAIYRQGECWRLLGRQDRAVTAYDRALEFRPGDYW
CWYRRGDALQAWGKPEAALASYDQALNAKPNDFWAWYQRGNTLASLGNYPAAIAAFTQALIDAPDDAETWYAQARCLAQI
GDGQGAFRSLEKAIALDPLTYFPQAETAPCFTPLRSLASWENLQQLAQPTQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=250, Percent_Identity=26.8, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI32307148, Length=250, Percent_Identity=26.8, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI167466177, Length=217, Percent_Identity=23.0414746543779, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI167466175, Length=217, Percent_Identity=23.0414746543779, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=229, Percent_Identity=26.2008733624454, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=229, Percent_Identity=26.2008733624454, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6319387, Length=186, Percent_Identity=27.9569892473118, Blast_Score=76, Evalue=6e-15,
Organism=Drosophila melanogaster, GI17647755, Length=258, Percent_Identity=25.1937984496124, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24585827, Length=258, Percent_Identity=25.1937984496124, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24585829, Length=258, Percent_Identity=25.1937984496124, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 33573; Mature: 33573

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDLLTVARTTYRPLECRPDSYRGWYQQGQLCWLEGNVDEALLCYHRALEYYPNDYWAWY
CCHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEHHH
HLAIAHEKLGHVDEAITAYQRACAIGPENYWSWYDQGCLYMEVLQVYTQAIACFEKALAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
QPNDYWAIYRQGECWRLLGRQDRAVTAYDRALEFRPGDYWCWYRRGDALQAWGKPEAALA
CCCCEEEEEECCCHHHHCCCCCCEEHHHHHHHCCCCCCEEEEEECCCCHHCCCCCHHHHH
SYDQALNAKPNDFWAWYQRGNTLASLGNYPAAIAAFTQALIDAPDDAETWYAQARCLAQI
HHHHHHCCCCCHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GDGQGAFRSLEKAIALDPLTYFPQAETAPCFTPLRSLASWENLQQLAQPTQA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEDLLTVARTTYRPLECRPDSYRGWYQQGQLCWLEGNVDEALLCYHRALEYYPNDYWAWY
CCHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEHHH
HLAIAHEKLGHVDEAITAYQRACAIGPENYWSWYDQGCLYMEVLQVYTQAIACFEKALAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
QPNDYWAIYRQGECWRLLGRQDRAVTAYDRALEFRPGDYWCWYRRGDALQAWGKPEAALA
CCCCEEEEEECCCHHHHCCCCCCEEHHHHHHHCCCCCCEEEEEECCCCHHCCCCCHHHHH
SYDQALNAKPNDFWAWYQRGNTLASLGNYPAAIAAFTQALIDAPDDAETWYAQARCLAQI
HHHHHHCCCCCHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GDGQGAFRSLEKAIALDPLTYFPQAETAPCFTPLRSLASWENLQQLAQPTQA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]