| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yyaL [H]
Identifier: 170079059
GI number: 170079059
Start: 2564210
End: 2566252
Strand: Reverse
Name: yyaL [H]
Synonym: SYNPCC7002_A2464
Alternate gene names: 170079059
Gene position: 2566252-2564210 (Counterclockwise)
Preceding gene: 170079064
Following gene: 170079058
Centisome position: 85.31
GC content: 49.88
Gene sequence:
>2043_bases ATGGCGAATCGCTTGGCCGACACCAAAAGTCTCTATCTTCGCAAACACGCGGATAATCCCATCGACTGGTGGTATTGGTG TGATGAGGCTTTGGCCCAGGCAAAGGCAGAAAATAAGCCCATTTTTCTCTCCATTGGTTATTCTTCCTGCCATTGGTGCA CTGTGATGGAAGGGGAAGCGTTTTCTGATCCAGAAATTGCCACCTATTTAAACGAAAATTTTTTACCCATCAAAGTGGAT CGCGAGGAACGGCCAGACATCGACAGCATCTATATGCAAGCGTTGCAACTGATGACAGGGCAAGGGGGCTGGCCACTGAA TATTTTTCTGACGCCGGCTGATTTGATGCCATTTTATGGGGGTACCTATTTTCCTGTTTCTCCCCGGTATAATCGCCCTG GATTTTTGGATGTGCTGATGTCTCTGCGACGGTTCTTTGATGAGGAGCCGGAGAAACTCCAGGAGATTAAAACTGAAATT TTCACAATTTTAGACCGTTCTGCTCAACTGCCCCAGGGCCAAGCGCCCCTCGATCAAAATCTGTTTCTCAAAGGCCTAGA GCCTTGTACTGCCATTGTGGGCCGGGGTGATGCGGGGCCAAGTTTTCCGATGATCCCCTACGGGGCGATCGCCTTACAGG GAAGTCGTTTTACCTCGAATGCGCGCCACAACGGTTTGTTAGTGAGTACCAAACGGGGTTTAGACCTTGCCCTGGGGGGA ATTTATGACCATGTGGGGGGCGGCTTCCATCGCTATACCGTCGATCCCCATTGGACAGTGCCCCATTTTGAAAAAATGCT CTATGACAACGGGCAAATCACCGAGTTTCTCGCCAATCTGTGGGCTGAGGGGGTGACGGAGCCGGCCTTTAAAACGGCCC TAGAGGGAACCGTCGCTTGGCTCGCCCGGGAAATGACAGCCCCCCAAGGCTATTTTTATGCAGCCCAGGATGCCGATAGT TTTCTCGATGCCGGGCACCCAGAACCAGAAGAAGGCGCTTTCTATGTCTGGGATTACGACGAACTCCAGACGCAACTCAC GGCGGCACAATTTGCTGAATTGGAACAGGCATTTTTTATTGCGCCGGACGGTAATTTTGAGGGAAAAATTGTTTTAAAAC GACGGCAATCCACAGAAATTTCGGAGAGCTTGCAAGGCATTCTTGATCAATTATTTACAGAGCGCTACGGTACGCCCCGG CAGGCCCTCGATCAGTTTCCCCCTGCCCGCGATAACACCGAAGCAAAGGCAACAGCTTGGCCCAGCAGAATTCCGGCGGT TACAGATACGAAATTAATTGTGGCCTGGAATAGTTTGATGATTTCGGGATTGGCGCGGATCTATGGGGTTTTGGGTCTCG AAAAAGCTTGGGAATTAGCCGTCAACTGTGTCAATTTTATCCTCGAACACCAATGGCAAGGAGGTCGTTTATATCGGCTA AATTTTGACGGGGAAGCAGACGGGATGGCCCAGTCGGAAGATTATGCTTTCCTCATCAAAGCTTTGTTGGATTTGCAGAC CAATCACCCTGAGCAGACGCATTGGCTCGAAAAGGCGATCGCCCTCCAGACAGAATTCGATCAGCAGTTTTGGTCAACGG ATTTGAAGGGGTATTTTAACAACCGCCAAAGTCCCGAACTCTTGATCCAAGAACGCAGTTACCAAGACAATGCCACCCCT GCGGCTAATGGTGTTGCCATCTGTAATTTGATGCGTCTTTTCTTGCTTACAGAAAATACCCAGTACCTCGACCGCGCCAC GGATGCATTGCTGTCCTTTGGGTCTGTGCTCGAAAAATCCCCACAACAGTGCCCCACATTACTTTTAGCCTTGGATTGGT ACTTACATGGCACCGTTGTAAAAGCGAAGCCGCAGCAATTATTGAAACTCAGAAAAACCCTGTTAAATTCGGTGGTGCTT AAACCCACCCAGGAATTGCCTGCGGGGAGTATTGCCCTGGTGTGCCAAGGGTTGAATTGTTTAGAACCTTGTCGCAGCGA AAGTCAATTGGCGACTCAGCTTCAAACAAGTTTACAGCGGTGA
Upstream 100 bases:
>100_bases AAGATTGCTGTTCGATTCTAACTGATCACCCTGACAAATTTGGCACAGAATCCATTCGCTAGAATGCCTTTAGAAATTCT TTCCAGGAGCAGCACTTTCC
Downstream 100 bases:
>100_bases GGGGTGTGAATTAGGCAACTTCGGTTACGCTGGATTTGCGATTCAATCCGTCTTCTCCCCATAAGCGCCATGCCAGAGCA TAGTCATTCCTCGCACCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 680; Mature: 679
Protein sequence:
>680_residues MANRLADTKSLYLRKHADNPIDWWYWCDEALAQAKAENKPIFLSIGYSSCHWCTVMEGEAFSDPEIATYLNENFLPIKVD REERPDIDSIYMQALQLMTGQGGWPLNIFLTPADLMPFYGGTYFPVSPRYNRPGFLDVLMSLRRFFDEEPEKLQEIKTEI FTILDRSAQLPQGQAPLDQNLFLKGLEPCTAIVGRGDAGPSFPMIPYGAIALQGSRFTSNARHNGLLVSTKRGLDLALGG IYDHVGGGFHRYTVDPHWTVPHFEKMLYDNGQITEFLANLWAEGVTEPAFKTALEGTVAWLAREMTAPQGYFYAAQDADS FLDAGHPEPEEGAFYVWDYDELQTQLTAAQFAELEQAFFIAPDGNFEGKIVLKRRQSTEISESLQGILDQLFTERYGTPR QALDQFPPARDNTEAKATAWPSRIPAVTDTKLIVAWNSLMISGLARIYGVLGLEKAWELAVNCVNFILEHQWQGGRLYRL NFDGEADGMAQSEDYAFLIKALLDLQTNHPEQTHWLEKAIALQTEFDQQFWSTDLKGYFNNRQSPELLIQERSYQDNATP AANGVAICNLMRLFLLTENTQYLDRATDALLSFGSVLEKSPQQCPTLLLALDWYLHGTVVKAKPQQLLKLRKTLLNSVVL KPTQELPAGSIALVCQGLNCLEPCRSESQLATQLQTSLQR
Sequences:
>Translated_680_residues MANRLADTKSLYLRKHADNPIDWWYWCDEALAQAKAENKPIFLSIGYSSCHWCTVMEGEAFSDPEIATYLNENFLPIKVD REERPDIDSIYMQALQLMTGQGGWPLNIFLTPADLMPFYGGTYFPVSPRYNRPGFLDVLMSLRRFFDEEPEKLQEIKTEI FTILDRSAQLPQGQAPLDQNLFLKGLEPCTAIVGRGDAGPSFPMIPYGAIALQGSRFTSNARHNGLLVSTKRGLDLALGG IYDHVGGGFHRYTVDPHWTVPHFEKMLYDNGQITEFLANLWAEGVTEPAFKTALEGTVAWLAREMTAPQGYFYAAQDADS FLDAGHPEPEEGAFYVWDYDELQTQLTAAQFAELEQAFFIAPDGNFEGKIVLKRRQSTEISESLQGILDQLFTERYGTPR QALDQFPPARDNTEAKATAWPSRIPAVTDTKLIVAWNSLMISGLARIYGVLGLEKAWELAVNCVNFILEHQWQGGRLYRL NFDGEADGMAQSEDYAFLIKALLDLQTNHPEQTHWLEKAIALQTEFDQQFWSTDLKGYFNNRQSPELLIQERSYQDNATP AANGVAICNLMRLFLLTENTQYLDRATDALLSFGSVLEKSPQQCPTLLLALDWYLHGTVVKAKPQQLLKLRKTLLNSVVL KPTQELPAGSIALVCQGLNCLEPCRSESQLATQLQTSLQR >Mature_679_residues ANRLADTKSLYLRKHADNPIDWWYWCDEALAQAKAENKPIFLSIGYSSCHWCTVMEGEAFSDPEIATYLNENFLPIKVDR EERPDIDSIYMQALQLMTGQGGWPLNIFLTPADLMPFYGGTYFPVSPRYNRPGFLDVLMSLRRFFDEEPEKLQEIKTEIF TILDRSAQLPQGQAPLDQNLFLKGLEPCTAIVGRGDAGPSFPMIPYGAIALQGSRFTSNARHNGLLVSTKRGLDLALGGI YDHVGGGFHRYTVDPHWTVPHFEKMLYDNGQITEFLANLWAEGVTEPAFKTALEGTVAWLAREMTAPQGYFYAAQDADSF LDAGHPEPEEGAFYVWDYDELQTQLTAAQFAELEQAFFIAPDGNFEGKIVLKRRQSTEISESLQGILDQLFTERYGTPRQ ALDQFPPARDNTEAKATAWPSRIPAVTDTKLIVAWNSLMISGLARIYGVLGLEKAWELAVNCVNFILEHQWQGGRLYRLN FDGEADGMAQSEDYAFLIKALLDLQTNHPEQTHWLEKAIALQTEFDQQFWSTDLKGYFNNRQSPELLIQERSYQDNATPA ANGVAICNLMRLFLLTENTQYLDRATDALLSFGSVLEKSPQQCPTLLLALDWYLHGTVVKAKPQQLLKLRKTLLNSVVLK PTQELPAGSIALVCQGLNCLEPCRSESQLATQLQTSLQR
Specific function: Unknown
COG id: COG1331
COG function: function code O; Highly conserved protein containing a thioredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.elegans B0495.5 [H]
Homologues:
Organism=Homo sapiens, GI31542723, Length=671, Percent_Identity=34.575260804769, Blast_Score=347, Evalue=2e-95, Organism=Caenorhabditis elegans, GI25147430, Length=719, Percent_Identity=31.5716272600835, Blast_Score=330, Evalue=2e-90, Organism=Drosophila melanogaster, GI20129985, Length=669, Percent_Identity=33.034379671151, Blast_Score=307, Evalue=1e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 - InterPro: IPR004879 - InterPro: IPR005198 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]
EC number: NA
Molecular weight: Translated: 76617; Mature: 76485
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRLADTKSLYLRKHADNPIDWWYWCDEALAQAKAENKPIFLSIGYSSCHWCTVMEGEA CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCC FSDPEIATYLNENFLPIKVDREERPDIDSIYMQALQLMTGQGGWPLNIFLTPADLMPFYG CCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCC GTYFPVSPRYNRPGFLDVLMSLRRFFDEEPEKLQEIKTEIFTILDRSAQLPQGQAPLDQN CEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LFLKGLEPCTAIVGRGDAGPSFPMIPYGAIALQGSRFTSNARHNGLLVSTKRGLDLALGG HHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCEEEHHH IYDHVGGGFHRYTVDPHWTVPHFEKMLYDNGQITEFLANLWAEGVTEPAFKTALEGTVAW HHHHHCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LAREMTAPQGYFYAAQDADSFLDAGHPEPEEGAFYVWDYDELQTQLTAAQFAELEQAFFI HHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHEEEE APDGNFEGKIVLKRRQSTEISESLQGILDQLFTERYGTPRQALDQFPPARDNTEAKATAW CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC PSRIPAVTDTKLIVAWNSLMISGLARIYGVLGLEKAWELAVNCVNFILEHQWQGGRLYRL CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE NFDGEADGMAQSEDYAFLIKALLDLQTNHPEQTHWLEKAIALQTEFDQQFWSTDLKGYFN ECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NRQSPELLIQERSYQDNATPAANGVAICNLMRLFLLTENTQYLDRATDALLSFGSVLEKS CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC PQQCPTLLLALDWYLHGTVVKAKPQQLLKLRKTLLNSVVLKPTQELPAGSIALVCQGLNC HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCH LEPCRSESQLATQLQTSLQR HHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure ANRLADTKSLYLRKHADNPIDWWYWCDEALAQAKAENKPIFLSIGYSSCHWCTVMEGEA CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCC FSDPEIATYLNENFLPIKVDREERPDIDSIYMQALQLMTGQGGWPLNIFLTPADLMPFYG CCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCC GTYFPVSPRYNRPGFLDVLMSLRRFFDEEPEKLQEIKTEIFTILDRSAQLPQGQAPLDQN CEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LFLKGLEPCTAIVGRGDAGPSFPMIPYGAIALQGSRFTSNARHNGLLVSTKRGLDLALGG HHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCEEEHHH IYDHVGGGFHRYTVDPHWTVPHFEKMLYDNGQITEFLANLWAEGVTEPAFKTALEGTVAW HHHHHCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LAREMTAPQGYFYAAQDADSFLDAGHPEPEEGAFYVWDYDELQTQLTAAQFAELEQAFFI HHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHEEEE APDGNFEGKIVLKRRQSTEISESLQGILDQLFTERYGTPRQALDQFPPARDNTEAKATAW CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC PSRIPAVTDTKLIVAWNSLMISGLARIYGVLGLEKAWELAVNCVNFILEHQWQGGRLYRL CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE NFDGEADGMAQSEDYAFLIKALLDLQTNHPEQTHWLEKAIALQTEFDQQFWSTDLKGYFN ECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NRQSPELLIQERSYQDNATPAANGVAICNLMRLFLLTENTQYLDRATDALLSFGSVLEKS CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC PQQCPTLLLALDWYLHGTVVKAKPQQLLKLRKTLLNSVVLKPTQELPAGSIALVCQGLNC HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCH LEPCRSESQLATQLQTSLQR HHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]