| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is glk [H]
Identifier: 170079033
GI number: 170079033
Start: 2531717
End: 2532616
Strand: Direct
Name: glk [H]
Synonym: SYNPCC7002_A2438
Alternate gene names: 170079033
Gene position: 2531717-2532616 (Clockwise)
Preceding gene: 170079032
Following gene: 170079034
Centisome position: 84.16
GC content: 53.44
Gene sequence:
>900_bases ATGAGCACAGTGATTGGGATTGATCTGGGGGGTACGGCCATCAAAGGGGGAAAATTTAGCCCTGATGGTCTTTGTTTAGC GGAAAAAGCAGTACCTACGCCCCAACCCAGTACCCCAACCGCTGTCGCCGAGGCGATCGCCAATTTAGTCAAGGAACTTA ACTCAGATCACAGTTGTAAAGCAGTGGGGATCGGCATTCCTGGCCCGGTAGATGGTACAGCGCGCATTGCCAAGGTTGCG ATCAATCTCAGTGGTTGGCAGGATGTGCCCCTCGCGGACTGGGTTGAGGCCAAAACCGGTTTACCCACAACGTTAAATAA CGATGCCAACTGTGCCGGCCTGGGGGAAGCTTGGTTAGGAGCGGGGCGCGATCGCCAAAATCTCCTGCTCATTACCCTAG GAACGGGAGTCGGTGGGGCGGTAATCCTCAACGGAAAACTTTTTACGGGCCATTACGGTGCCGCTGGCGAGTTGGGCCTG ATTACCCTCAATCCCGATGGCCCCCCCTGCAATAGTGGTAATAATGGTTCCTTCGAGCAATATTGTTCGATCAATGGCGT TAAGCGGATTTCTGGTAAAGACCCTGGGGAATTAGGAGAACTGGCCCAGGCGGGAGATGCTGAGGCGATCGCCCATTGGC AAACCTATGGCAAACTGTTGGGAGCTGGGCTGACAAGCTTAATCTATATTTTCACCCCGGAGATGATTATTCTGGGGGGC GGCATTAGTGCCAGCAGTGACTTTTTCATCCCAGCGGCGATCGCCGAAATTGAACGGCGGGTGCTTCCTTCCTCACGGGT GGATTTAAAACTGACCAAGGCCCAGTTAGGCAACAATGCCGGTATGGTGGGCGCAGCAAAACTCGCCCTCGAAAAAATCT TAAATACCCTGGACAATTAG
Upstream 100 bases:
>100_bases CTTTGAACCCGGTGACGAAAAGGACGTAGAATTAGTGGCCTTGGCGGGTCGTCGCCATGTGTATGGTCTGAATAATTTGG TAGATGGAGCATTGGACTAG
Downstream 100 bases:
>100_bases GGAGAATTATTGATGCCATCTCTGCTAGCTTGATCTTTTTAAAAAGCCTCCGCCAAAATACGGAAACCTCGTAAACGTCA TAGAAATTTACTGCAATGAG
Product: glucokinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSTVIGIDLGGTAIKGGKFSPDGLCLAEKAVPTPQPSTPTAVAEAIANLVKELNSDHSCKAVGIGIPGPVDGTARIAKVA INLSGWQDVPLADWVEAKTGLPTTLNNDANCAGLGEAWLGAGRDRQNLLLITLGTGVGGAVILNGKLFTGHYGAAGELGL ITLNPDGPPCNSGNNGSFEQYCSINGVKRISGKDPGELGELAQAGDAEAIAHWQTYGKLLGAGLTSLIYIFTPEMIILGG GISASSDFFIPAAIAEIERRVLPSSRVDLKLTKAQLGNNAGMVGAAKLALEKILNTLDN
Sequences:
>Translated_299_residues MSTVIGIDLGGTAIKGGKFSPDGLCLAEKAVPTPQPSTPTAVAEAIANLVKELNSDHSCKAVGIGIPGPVDGTARIAKVA INLSGWQDVPLADWVEAKTGLPTTLNNDANCAGLGEAWLGAGRDRQNLLLITLGTGVGGAVILNGKLFTGHYGAAGELGL ITLNPDGPPCNSGNNGSFEQYCSINGVKRISGKDPGELGELAQAGDAEAIAHWQTYGKLLGAGLTSLIYIFTPEMIILGG GISASSDFFIPAAIAEIERRVLPSSRVDLKLTKAQLGNNAGMVGAAKLALEKILNTLDN >Mature_298_residues STVIGIDLGGTAIKGGKFSPDGLCLAEKAVPTPQPSTPTAVAEAIANLVKELNSDHSCKAVGIGIPGPVDGTARIAKVAI NLSGWQDVPLADWVEAKTGLPTTLNNDANCAGLGEAWLGAGRDRQNLLLITLGTGVGGAVILNGKLFTGHYGAAGELGLI TLNPDGPPCNSGNNGSFEQYCSINGVKRISGKDPGELGELAQAGDAEAIAHWQTYGKLLGAGLTSLIYIFTPEMIILGGG ISASSDFFIPAAIAEIERRVLPSSRVDLKLTKAQLGNNAGMVGAAKLALEKILNTLDN
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=283, Percent_Identity=27.208480565371, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI4885285, Length=283, Percent_Identity=27.208480565371, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI298566325, Length=283, Percent_Identity=27.208480565371, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI190014632, Length=283, Percent_Identity=27.208480565371, Blast_Score=79, Evalue=6e-15, Organism=Escherichia coli, GI1787363, Length=309, Percent_Identity=33.9805825242718, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI87081733, Length=300, Percent_Identity=29.3333333333333, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1786891, Length=312, Percent_Identity=25.3205128205128, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787878, Length=241, Percent_Identity=24.4813278008299, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1790522, Length=303, Percent_Identity=28.3828382838284, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI87082230, Length=252, Percent_Identity=28.968253968254, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI87082127, Length=211, Percent_Identity=24.1706161137441, Blast_Score=64, Evalue=9e-12,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 30592; Mature: 30461
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVIGIDLGGTAIKGGKFSPDGLCLAEKAVPTPQPSTPTAVAEAIANLVKELNSDHSCK CCEEEEEECCCCEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCE AVGIGIPGPVDGTARIAKVAINLSGWQDVPLADWVEAKTGLPTTLNNDANCAGLGEAWLG EEEECCCCCCCCHHEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHC AGRDRQNLLLITLGTGVGGAVILNGKLFTGHYGAAGELGLITLNPDGPPCNSGNNGSFEQ CCCCCCCEEEEEECCCCCCEEEECCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHH YCSINGVKRISGKDPGELGELAQAGDAEAIAHWQTYGKLLGAGLTSLIYIFTPEMIILGG HHCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC GISASSDFFIPAAIAEIERRVLPSSRVDLKLTKAQLGNNAGMVGAAKLALEKILNTLDN CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure STVIGIDLGGTAIKGGKFSPDGLCLAEKAVPTPQPSTPTAVAEAIANLVKELNSDHSCK CEEEEEECCCCEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCE AVGIGIPGPVDGTARIAKVAINLSGWQDVPLADWVEAKTGLPTTLNNDANCAGLGEAWLG EEEECCCCCCCCHHEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHC AGRDRQNLLLITLGTGVGGAVILNGKLFTGHYGAAGELGLITLNPDGPPCNSGNNGSFEQ CCCCCCCEEEEEECCCCCCEEEECCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHH YCSINGVKRISGKDPGELGELAQAGDAEAIAHWQTYGKLLGAGLTSLIYIFTPEMIILGG HHCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC GISASSDFFIPAAIAEIERRVLPSSRVDLKLTKAQLGNNAGMVGAAKLALEKILNTLDN CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]