| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079012
Identifier: 170079012
GI number: 170079012
Start: 2504797
End: 2506707
Strand: Direct
Name: 170079012
Synonym: SYNPCC7002_A2417
Alternate gene names: NA
Gene position: 2504797-2506707 (Clockwise)
Preceding gene: 170079011
Following gene: 170079013
Centisome position: 83.27
GC content: 37.68
Gene sequence:
>1911_bases ATGGATAAGTTAACGTTTCTTTGTTTACTATTTTTAAGTAGCTTGGGGGCAACATATTTTCTTTGGTTTATTTGTCACCT CAATGGCCAACTATTATTTTATGGCCTCCATCTATGCAACAAGAAATGGCAGCCTAATACAAGTACAATTACCTCTCCCG GGCTGGATTGCTTTTATTTTAGGCCACTAGGCTTGACAGCGGTATACTTAGTTGGGGCAATGCCAATTGCTGTCTTAAGT TTATCAACAGCCTATCTTAATCATTGCTTTAATGCTTTCTATGGAACAGTAATCCTTGAATTAGTCTTTGGACTGGTATT TTTATTATTGCCAAATACTCAACGAAAGGCTTTTGATCTATTTGGATTTCGCTTAATCCAACGCTATCGTCATTTGGTTA TTTATACGAGTATTTGGTGCCTTGTTTTTTCAATATGGGTCATGGTTACTCGTCATTCTAATTTAGATACCTTGGTATTA AATACAAACCCTGATTTTTGGGCCTATGTTCGTCGTTATGGCGCAATGACTACAACTAATCTAAATTTTTATGGGATGAC GGATAGTTTTGAATTTCCTGACAATTCTGCTTGTGCCTATTTTCTTGGTAGTCCCAAAAAGTTTAGTTCATTTTTAGGGG CAATAGTTTCGTATCTATTTTCTGATCTATCCCTTGGAATTACAGTATTTCAAGGCATGCTAGGAGCAACTCTATTCATG GCCCTTTTTAAAGACTGGTGTGCCACTCCCCTTGACCAGCATCAGTCCTTGAATTTAAGTGATCTTGCTTTAGTGATTTG GGCAGTTTTTTCTCCCCAATTATATTGGCTTTTAGTAAGTGCTTACTTTTCAAATACCTTGTTTATTATTGTCATTTCCT TGGTTTTTCGTCAAGCCCGAAATGCCTCTTTACATGAGAATTTATTTAATGCCCAAAATTTCCTCTGCTTGTTTTGCATT CAAGTAGTTGTTTTTTCTTTTTATCCAGCATTTTTACCAATTACTATTGCTGTATATTTTTGCACAACTTTAATTTATTT AAAATACAGCGAAAGAAGTCTAAATCAATTGTTTTTTGATTACAGCAAATATGCTATTTTGATTTTGATTTGTGGCTTAA TCTTTTATACACTGTTCAATTCTCAATTTATTCTTGATGAAATTCAAAAGAGCATTAATCCACTGAAATCCCATGGAACG AATTTTGTACCCCTTAATCCCTGGAGTCTTTTTCAAGAAAAGCCGAAACCTATGGGAGCAAACAAGGATTTTGGCGTTTG GTTCAATGTGGTTTTAGGTTTATTATTTAGTGTCTATTGCCTTTGGCAACTCTATCGAGCCTACAGCCGCAACAAAGATT TTGTAATTAAACGTGATCTTTTGGCTGGTTGTACTGGTATGGGTTTATATAGTTTCTATTTACTGGCTTATATTCCATTA GAATCCACCTATCGTCTTGGGAAAATCGCCATCAGTCTCATTTATCCCCTCGGAATTTTTGCTTTGTTACCAGTTGTGGT TTGGTTAAAGGATTATTTCCGCCAACAGGCAAATTGGCAACGCCAGGCTGTTTTGGGTTTGGCGATCGCCCATGTTGTTT TCCACATTTACAAAATTACTGATGCGACGACGTTCCCCTCTGGTCAGGTCACCATGCCTAGCCCAGCCCAACAAAAAGAA CTGTCGCAGTTAAACTCAATTACGATTATCGGTTGCGAACAGGTACACCAAAGTCAATTTTATGAACGCCTCGTGGGATT GCAAGTAGCTAAGCAAAACCCTCATCTTCAGGTAAATGTAGTCAATGAACCCGCCAACCTGACCCCAGATATCATGGGCG ATCGCTTAGTATTCGGCCAAATTATTCCTGGGCCAACCCCACGCTACAATGCTTGCAAGTTCGATTTTTAA
Upstream 100 bases:
>100_bases CCTGATAGCTAAACTTACGACACGAGTAACGATATAATTAATATCAACTACTCGTAAATATCCTTCCTCCAGTTTGGATT TTCCTCTTTGAGCTTGTAAT
Downstream 100 bases:
>100_bases GTTCCAAACCGTCCCCACAGGTTCGGGAACCTACACTATCAAGATCCTTAAATCGCACAGCACTATAGGAATAGTCATAT GAACGAACCTAGAATATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MDKLTFLCLLFLSSLGATYFLWFICHLNGQLLFYGLHLCNKKWQPNTSTITSPGLDCFYFRPLGLTAVYLVGAMPIAVLS LSTAYLNHCFNAFYGTVILELVFGLVFLLLPNTQRKAFDLFGFRLIQRYRHLVIYTSIWCLVFSIWVMVTRHSNLDTLVL NTNPDFWAYVRRYGAMTTTNLNFYGMTDSFEFPDNSACAYFLGSPKKFSSFLGAIVSYLFSDLSLGITVFQGMLGATLFM ALFKDWCATPLDQHQSLNLSDLALVIWAVFSPQLYWLLVSAYFSNTLFIIVISLVFRQARNASLHENLFNAQNFLCLFCI QVVVFSFYPAFLPITIAVYFCTTLIYLKYSERSLNQLFFDYSKYAILILICGLIFYTLFNSQFILDEIQKSINPLKSHGT NFVPLNPWSLFQEKPKPMGANKDFGVWFNVVLGLLFSVYCLWQLYRAYSRNKDFVIKRDLLAGCTGMGLYSFYLLAYIPL ESTYRLGKIAISLIYPLGIFALLPVVVWLKDYFRQQANWQRQAVLGLAIAHVVFHIYKITDATTFPSGQVTMPSPAQQKE LSQLNSITIIGCEQVHQSQFYERLVGLQVAKQNPHLQVNVVNEPANLTPDIMGDRLVFGQIIPGPTPRYNACKFDF
Sequences:
>Translated_636_residues MDKLTFLCLLFLSSLGATYFLWFICHLNGQLLFYGLHLCNKKWQPNTSTITSPGLDCFYFRPLGLTAVYLVGAMPIAVLS LSTAYLNHCFNAFYGTVILELVFGLVFLLLPNTQRKAFDLFGFRLIQRYRHLVIYTSIWCLVFSIWVMVTRHSNLDTLVL NTNPDFWAYVRRYGAMTTTNLNFYGMTDSFEFPDNSACAYFLGSPKKFSSFLGAIVSYLFSDLSLGITVFQGMLGATLFM ALFKDWCATPLDQHQSLNLSDLALVIWAVFSPQLYWLLVSAYFSNTLFIIVISLVFRQARNASLHENLFNAQNFLCLFCI QVVVFSFYPAFLPITIAVYFCTTLIYLKYSERSLNQLFFDYSKYAILILICGLIFYTLFNSQFILDEIQKSINPLKSHGT NFVPLNPWSLFQEKPKPMGANKDFGVWFNVVLGLLFSVYCLWQLYRAYSRNKDFVIKRDLLAGCTGMGLYSFYLLAYIPL ESTYRLGKIAISLIYPLGIFALLPVVVWLKDYFRQQANWQRQAVLGLAIAHVVFHIYKITDATTFPSGQVTMPSPAQQKE LSQLNSITIIGCEQVHQSQFYERLVGLQVAKQNPHLQVNVVNEPANLTPDIMGDRLVFGQIIPGPTPRYNACKFDF >Mature_636_residues MDKLTFLCLLFLSSLGATYFLWFICHLNGQLLFYGLHLCNKKWQPNTSTITSPGLDCFYFRPLGLTAVYLVGAMPIAVLS LSTAYLNHCFNAFYGTVILELVFGLVFLLLPNTQRKAFDLFGFRLIQRYRHLVIYTSIWCLVFSIWVMVTRHSNLDTLVL NTNPDFWAYVRRYGAMTTTNLNFYGMTDSFEFPDNSACAYFLGSPKKFSSFLGAIVSYLFSDLSLGITVFQGMLGATLFM ALFKDWCATPLDQHQSLNLSDLALVIWAVFSPQLYWLLVSAYFSNTLFIIVISLVFRQARNASLHENLFNAQNFLCLFCI QVVVFSFYPAFLPITIAVYFCTTLIYLKYSERSLNQLFFDYSKYAILILICGLIFYTLFNSQFILDEIQKSINPLKSHGT NFVPLNPWSLFQEKPKPMGANKDFGVWFNVVLGLLFSVYCLWQLYRAYSRNKDFVIKRDLLAGCTGMGLYSFYLLAYIPL ESTYRLGKIAISLIYPLGIFALLPVVVWLKDYFRQQANWQRQAVLGLAIAHVVFHIYKITDATTFPSGQVTMPSPAQQKE LSQLNSITIIGCEQVHQSQFYERLVGLQVAKQNPHLQVNVVNEPANLTPDIMGDRLVFGQIIPGPTPRYNACKFDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72727; Mature: 72727
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLTFLCLLFLSSLGATYFLWFICHLNGQLLFYGLHLCNKKWQPNTSTITSPGLDCFYF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCEEEE RPLGLTAVYLVGAMPIAVLSLSTAYLNHCFNAFYGTVILELVFGLVFLLLPNTQRKAFDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FGFRLIQRYRHLVIYTSIWCLVFSIWVMVTRHSNLDTLVLNTNPDFWAYVRRYGAMTTTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEECC LNFYGMTDSFEFPDNSACAYFLGSPKKFSSFLGAIVSYLFSDLSLGITVFQGMLGATLFM EEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFKDWCATPLDQHQSLNLSDLALVIWAVFSPQLYWLLVSAYFSNTLFIIVISLVFRQAR HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NASLHENLFNAQNFLCLFCIQVVVFSFYPAFLPITIAVYFCTTLIYLKYSERSLNQLFFD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YSKYAILILICGLIFYTLFNSQFILDEIQKSINPLKSHGTNFVPLNPWSLFQEKPKPMGA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCC NKDFGVWFNVVLGLLFSVYCLWQLYRAYSRNKDFVIKRDLLAGCTGMGLYSFYLLAYIPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCHHHHHHHHHHHHCCC ESTYRLGKIAISLIYPLGIFALLPVVVWLKDYFRQQANWQRQAVLGLAIAHVVFHIYKIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC DATTFPSGQVTMPSPAQQKELSQLNSITIIGCEQVHQSQFYERLVGLQVAKQNPHLQVNV CCCCCCCCCEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VNEPANLTPDIMGDRLVFGQIIPGPTPRYNACKFDF ECCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDKLTFLCLLFLSSLGATYFLWFICHLNGQLLFYGLHLCNKKWQPNTSTITSPGLDCFYF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCEEEE RPLGLTAVYLVGAMPIAVLSLSTAYLNHCFNAFYGTVILELVFGLVFLLLPNTQRKAFDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FGFRLIQRYRHLVIYTSIWCLVFSIWVMVTRHSNLDTLVLNTNPDFWAYVRRYGAMTTTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEECC LNFYGMTDSFEFPDNSACAYFLGSPKKFSSFLGAIVSYLFSDLSLGITVFQGMLGATLFM EEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFKDWCATPLDQHQSLNLSDLALVIWAVFSPQLYWLLVSAYFSNTLFIIVISLVFRQAR HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NASLHENLFNAQNFLCLFCIQVVVFSFYPAFLPITIAVYFCTTLIYLKYSERSLNQLFFD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YSKYAILILICGLIFYTLFNSQFILDEIQKSINPLKSHGTNFVPLNPWSLFQEKPKPMGA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCC NKDFGVWFNVVLGLLFSVYCLWQLYRAYSRNKDFVIKRDLLAGCTGMGLYSFYLLAYIPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCHHHHHHHHHHHHCCC ESTYRLGKIAISLIYPLGIFALLPVVVWLKDYFRQQANWQRQAVLGLAIAHVVFHIYKIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC DATTFPSGQVTMPSPAQQKELSQLNSITIIGCEQVHQSQFYERLVGLQVAKQNPHLQVNV CCCCCCCCCEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VNEPANLTPDIMGDRLVFGQIIPGPTPRYNACKFDF ECCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA