Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079012

Identifier: 170079012

GI number: 170079012

Start: 2504797

End: 2506707

Strand: Direct

Name: 170079012

Synonym: SYNPCC7002_A2417

Alternate gene names: NA

Gene position: 2504797-2506707 (Clockwise)

Preceding gene: 170079011

Following gene: 170079013

Centisome position: 83.27

GC content: 37.68

Gene sequence:

>1911_bases
ATGGATAAGTTAACGTTTCTTTGTTTACTATTTTTAAGTAGCTTGGGGGCAACATATTTTCTTTGGTTTATTTGTCACCT
CAATGGCCAACTATTATTTTATGGCCTCCATCTATGCAACAAGAAATGGCAGCCTAATACAAGTACAATTACCTCTCCCG
GGCTGGATTGCTTTTATTTTAGGCCACTAGGCTTGACAGCGGTATACTTAGTTGGGGCAATGCCAATTGCTGTCTTAAGT
TTATCAACAGCCTATCTTAATCATTGCTTTAATGCTTTCTATGGAACAGTAATCCTTGAATTAGTCTTTGGACTGGTATT
TTTATTATTGCCAAATACTCAACGAAAGGCTTTTGATCTATTTGGATTTCGCTTAATCCAACGCTATCGTCATTTGGTTA
TTTATACGAGTATTTGGTGCCTTGTTTTTTCAATATGGGTCATGGTTACTCGTCATTCTAATTTAGATACCTTGGTATTA
AATACAAACCCTGATTTTTGGGCCTATGTTCGTCGTTATGGCGCAATGACTACAACTAATCTAAATTTTTATGGGATGAC
GGATAGTTTTGAATTTCCTGACAATTCTGCTTGTGCCTATTTTCTTGGTAGTCCCAAAAAGTTTAGTTCATTTTTAGGGG
CAATAGTTTCGTATCTATTTTCTGATCTATCCCTTGGAATTACAGTATTTCAAGGCATGCTAGGAGCAACTCTATTCATG
GCCCTTTTTAAAGACTGGTGTGCCACTCCCCTTGACCAGCATCAGTCCTTGAATTTAAGTGATCTTGCTTTAGTGATTTG
GGCAGTTTTTTCTCCCCAATTATATTGGCTTTTAGTAAGTGCTTACTTTTCAAATACCTTGTTTATTATTGTCATTTCCT
TGGTTTTTCGTCAAGCCCGAAATGCCTCTTTACATGAGAATTTATTTAATGCCCAAAATTTCCTCTGCTTGTTTTGCATT
CAAGTAGTTGTTTTTTCTTTTTATCCAGCATTTTTACCAATTACTATTGCTGTATATTTTTGCACAACTTTAATTTATTT
AAAATACAGCGAAAGAAGTCTAAATCAATTGTTTTTTGATTACAGCAAATATGCTATTTTGATTTTGATTTGTGGCTTAA
TCTTTTATACACTGTTCAATTCTCAATTTATTCTTGATGAAATTCAAAAGAGCATTAATCCACTGAAATCCCATGGAACG
AATTTTGTACCCCTTAATCCCTGGAGTCTTTTTCAAGAAAAGCCGAAACCTATGGGAGCAAACAAGGATTTTGGCGTTTG
GTTCAATGTGGTTTTAGGTTTATTATTTAGTGTCTATTGCCTTTGGCAACTCTATCGAGCCTACAGCCGCAACAAAGATT
TTGTAATTAAACGTGATCTTTTGGCTGGTTGTACTGGTATGGGTTTATATAGTTTCTATTTACTGGCTTATATTCCATTA
GAATCCACCTATCGTCTTGGGAAAATCGCCATCAGTCTCATTTATCCCCTCGGAATTTTTGCTTTGTTACCAGTTGTGGT
TTGGTTAAAGGATTATTTCCGCCAACAGGCAAATTGGCAACGCCAGGCTGTTTTGGGTTTGGCGATCGCCCATGTTGTTT
TCCACATTTACAAAATTACTGATGCGACGACGTTCCCCTCTGGTCAGGTCACCATGCCTAGCCCAGCCCAACAAAAAGAA
CTGTCGCAGTTAAACTCAATTACGATTATCGGTTGCGAACAGGTACACCAAAGTCAATTTTATGAACGCCTCGTGGGATT
GCAAGTAGCTAAGCAAAACCCTCATCTTCAGGTAAATGTAGTCAATGAACCCGCCAACCTGACCCCAGATATCATGGGCG
ATCGCTTAGTATTCGGCCAAATTATTCCTGGGCCAACCCCACGCTACAATGCTTGCAAGTTCGATTTTTAA

Upstream 100 bases:

>100_bases
CCTGATAGCTAAACTTACGACACGAGTAACGATATAATTAATATCAACTACTCGTAAATATCCTTCCTCCAGTTTGGATT
TTCCTCTTTGAGCTTGTAAT

Downstream 100 bases:

>100_bases
GTTCCAAACCGTCCCCACAGGTTCGGGAACCTACACTATCAAGATCCTTAAATCGCACAGCACTATAGGAATAGTCATAT
GAACGAACCTAGAATATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MDKLTFLCLLFLSSLGATYFLWFICHLNGQLLFYGLHLCNKKWQPNTSTITSPGLDCFYFRPLGLTAVYLVGAMPIAVLS
LSTAYLNHCFNAFYGTVILELVFGLVFLLLPNTQRKAFDLFGFRLIQRYRHLVIYTSIWCLVFSIWVMVTRHSNLDTLVL
NTNPDFWAYVRRYGAMTTTNLNFYGMTDSFEFPDNSACAYFLGSPKKFSSFLGAIVSYLFSDLSLGITVFQGMLGATLFM
ALFKDWCATPLDQHQSLNLSDLALVIWAVFSPQLYWLLVSAYFSNTLFIIVISLVFRQARNASLHENLFNAQNFLCLFCI
QVVVFSFYPAFLPITIAVYFCTTLIYLKYSERSLNQLFFDYSKYAILILICGLIFYTLFNSQFILDEIQKSINPLKSHGT
NFVPLNPWSLFQEKPKPMGANKDFGVWFNVVLGLLFSVYCLWQLYRAYSRNKDFVIKRDLLAGCTGMGLYSFYLLAYIPL
ESTYRLGKIAISLIYPLGIFALLPVVVWLKDYFRQQANWQRQAVLGLAIAHVVFHIYKITDATTFPSGQVTMPSPAQQKE
LSQLNSITIIGCEQVHQSQFYERLVGLQVAKQNPHLQVNVVNEPANLTPDIMGDRLVFGQIIPGPTPRYNACKFDF

Sequences:

>Translated_636_residues
MDKLTFLCLLFLSSLGATYFLWFICHLNGQLLFYGLHLCNKKWQPNTSTITSPGLDCFYFRPLGLTAVYLVGAMPIAVLS
LSTAYLNHCFNAFYGTVILELVFGLVFLLLPNTQRKAFDLFGFRLIQRYRHLVIYTSIWCLVFSIWVMVTRHSNLDTLVL
NTNPDFWAYVRRYGAMTTTNLNFYGMTDSFEFPDNSACAYFLGSPKKFSSFLGAIVSYLFSDLSLGITVFQGMLGATLFM
ALFKDWCATPLDQHQSLNLSDLALVIWAVFSPQLYWLLVSAYFSNTLFIIVISLVFRQARNASLHENLFNAQNFLCLFCI
QVVVFSFYPAFLPITIAVYFCTTLIYLKYSERSLNQLFFDYSKYAILILICGLIFYTLFNSQFILDEIQKSINPLKSHGT
NFVPLNPWSLFQEKPKPMGANKDFGVWFNVVLGLLFSVYCLWQLYRAYSRNKDFVIKRDLLAGCTGMGLYSFYLLAYIPL
ESTYRLGKIAISLIYPLGIFALLPVVVWLKDYFRQQANWQRQAVLGLAIAHVVFHIYKITDATTFPSGQVTMPSPAQQKE
LSQLNSITIIGCEQVHQSQFYERLVGLQVAKQNPHLQVNVVNEPANLTPDIMGDRLVFGQIIPGPTPRYNACKFDF
>Mature_636_residues
MDKLTFLCLLFLSSLGATYFLWFICHLNGQLLFYGLHLCNKKWQPNTSTITSPGLDCFYFRPLGLTAVYLVGAMPIAVLS
LSTAYLNHCFNAFYGTVILELVFGLVFLLLPNTQRKAFDLFGFRLIQRYRHLVIYTSIWCLVFSIWVMVTRHSNLDTLVL
NTNPDFWAYVRRYGAMTTTNLNFYGMTDSFEFPDNSACAYFLGSPKKFSSFLGAIVSYLFSDLSLGITVFQGMLGATLFM
ALFKDWCATPLDQHQSLNLSDLALVIWAVFSPQLYWLLVSAYFSNTLFIIVISLVFRQARNASLHENLFNAQNFLCLFCI
QVVVFSFYPAFLPITIAVYFCTTLIYLKYSERSLNQLFFDYSKYAILILICGLIFYTLFNSQFILDEIQKSINPLKSHGT
NFVPLNPWSLFQEKPKPMGANKDFGVWFNVVLGLLFSVYCLWQLYRAYSRNKDFVIKRDLLAGCTGMGLYSFYLLAYIPL
ESTYRLGKIAISLIYPLGIFALLPVVVWLKDYFRQQANWQRQAVLGLAIAHVVFHIYKITDATTFPSGQVTMPSPAQQKE
LSQLNSITIIGCEQVHQSQFYERLVGLQVAKQNPHLQVNVVNEPANLTPDIMGDRLVFGQIIPGPTPRYNACKFDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72727; Mature: 72727

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLTFLCLLFLSSLGATYFLWFICHLNGQLLFYGLHLCNKKWQPNTSTITSPGLDCFYF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCEEEE
RPLGLTAVYLVGAMPIAVLSLSTAYLNHCFNAFYGTVILELVFGLVFLLLPNTQRKAFDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FGFRLIQRYRHLVIYTSIWCLVFSIWVMVTRHSNLDTLVLNTNPDFWAYVRRYGAMTTTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEECC
LNFYGMTDSFEFPDNSACAYFLGSPKKFSSFLGAIVSYLFSDLSLGITVFQGMLGATLFM
EEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFKDWCATPLDQHQSLNLSDLALVIWAVFSPQLYWLLVSAYFSNTLFIIVISLVFRQAR
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NASLHENLFNAQNFLCLFCIQVVVFSFYPAFLPITIAVYFCTTLIYLKYSERSLNQLFFD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YSKYAILILICGLIFYTLFNSQFILDEIQKSINPLKSHGTNFVPLNPWSLFQEKPKPMGA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCC
NKDFGVWFNVVLGLLFSVYCLWQLYRAYSRNKDFVIKRDLLAGCTGMGLYSFYLLAYIPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCHHHHHHHHHHHHCCC
ESTYRLGKIAISLIYPLGIFALLPVVVWLKDYFRQQANWQRQAVLGLAIAHVVFHIYKIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
DATTFPSGQVTMPSPAQQKELSQLNSITIIGCEQVHQSQFYERLVGLQVAKQNPHLQVNV
CCCCCCCCCEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
VNEPANLTPDIMGDRLVFGQIIPGPTPRYNACKFDF
ECCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKLTFLCLLFLSSLGATYFLWFICHLNGQLLFYGLHLCNKKWQPNTSTITSPGLDCFYF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCEEEE
RPLGLTAVYLVGAMPIAVLSLSTAYLNHCFNAFYGTVILELVFGLVFLLLPNTQRKAFDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FGFRLIQRYRHLVIYTSIWCLVFSIWVMVTRHSNLDTLVLNTNPDFWAYVRRYGAMTTTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEECC
LNFYGMTDSFEFPDNSACAYFLGSPKKFSSFLGAIVSYLFSDLSLGITVFQGMLGATLFM
EEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFKDWCATPLDQHQSLNLSDLALVIWAVFSPQLYWLLVSAYFSNTLFIIVISLVFRQAR
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NASLHENLFNAQNFLCLFCIQVVVFSFYPAFLPITIAVYFCTTLIYLKYSERSLNQLFFD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YSKYAILILICGLIFYTLFNSQFILDEIQKSINPLKSHGTNFVPLNPWSLFQEKPKPMGA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCC
NKDFGVWFNVVLGLLFSVYCLWQLYRAYSRNKDFVIKRDLLAGCTGMGLYSFYLLAYIPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCHHHHHHHHHHHHCCC
ESTYRLGKIAISLIYPLGIFALLPVVVWLKDYFRQQANWQRQAVLGLAIAHVVFHIYKIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
DATTFPSGQVTMPSPAQQKELSQLNSITIIGCEQVHQSQFYERLVGLQVAKQNPHLQVNV
CCCCCCCCCEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
VNEPANLTPDIMGDRLVFGQIIPGPTPRYNACKFDF
ECCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA