Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079007

Identifier: 170079007

GI number: 170079007

Start: 2497801

End: 2499489

Strand: Reverse

Name: 170079007

Synonym: SYNPCC7002_A2412

Alternate gene names: NA

Gene position: 2499489-2497801 (Counterclockwise)

Preceding gene: 170079008

Following gene: 170079001

Centisome position: 83.09

GC content: 42.45

Gene sequence:

>1689_bases
ATGGTCAATCTTGAGGACATCAGACCCGTCAAAACCCCCTTTAAACAGGAAGAATGGCGGCCTATCCTGATTGTTAGCGG
CATCTTTTTTATCATCTGTATGGCTTTGGTGCTGCACCGTCATTTCACATTCTATTCCTCCTATGACCAAGGCATCTTCA
ATCAGGTCATGTGGAATGGAGCCCATGGCCGTTTTTTTCAAAGTAGCCTCTCTTCACAGTTATCTACCAATGTTGTTCAT
GCAGGGGAAGTCCCAGATGTCAGCTACCATCGCCTTGGGCAACACTTCACTCCTGCTCTACTTCTGTGGTTGCCAATTTA
TTTCTTTTTTCCCCATGCTGCAACCCTAGCCGTACTTCTAGTTACCATGCTATCGGCAGCGGGTCTTGTTCTGTACCTAT
TAGCACGACATTATCTAGATCCAGTTCCTGCCCGTTGGATTACCTATAGCTATTACGGTGCAAATGCTGTAATTGGCCCA
ACTTTATGTAATTTTCACGATAATTTCCAGTTGCCTCTTTTTATCTTTACGTTGCTTTTAGCCATGGAAAAACGTTGGTG
GTGGCTCTTTGGAATTATGTGTCCTTTGATCGTCATGATCCGTGAAGATAGCGGTATTGTTCTCTTCGGGGTGGGCGCTT
ATATGATCCTTAGTCGTCGTTTTCCAAAAATCGGAGCGGCGGTCTGTTTGTTTAGCTTTGGGTATATTCTGCTGCTAACT
AATTTAATTATGCCGATCTTTTCCGAGGATATTTCTAAGCGATTTATGCTCGAACGATTTGGGCAATATACAGACGCGGC
AGAGGCTTCCACCCTTGATATTTTATTGGCAATGCTCTCCAATCCATTGTTACTTCTTAGGGAACTGGTTACTCCTTTTG
ATCGGACAATTAAATATCTCGCAGGACAATTTTTGCCATTTGCTTTTGTCCCGGCAGTGGCTCCGAGTGCTTGGGCGCTC
GCCGGATTTCCCTTGCTCAAACTTCTGTTAGGAAAAGGGATGTCTGTTCTCTCGATTAATATCCGCTATGCCCTTGCCGT
TGTACCAGGTATTTGTTACGGGGTAATTTTATGGTGGTCTGGGGAAGGCTTTAATAATTTTTTCCGGAAAAACCAGCCCC
GTCATCCCCGACAAATCAGCCCATTTTTTAAAAAATTCTGGATTACTTGTTTAACCTTATCTATCGCTTTTACCATCACA
GCTAATCCTAACCGGACACTTTACTTTATGATTCCGGATTCTTTGCAACCTTGGGTTTATGTGTCCCCGATTGAGCAATG
GTCTCGCAGTGTTGATATTCAGGGCATGATTGGCCGTATTCCTCAGGATGCAAGCGTCTCCGCAACAACCTACATCATTC
CTCATTTATCTAGTCGTCGAGAAATTATTCGTTTACCCGGCATCGAAATTGAAAACGATCAACAAAACATCGAAAAAGTT
GATTTTATTGTGGCAGATCTATGGCGTCTAGTGCGTTATCAAGTCGCTTTTGATGAGGATTGGCAACGATTGAAAGATTA
TGTTGGGGTAATTGATCAAATTGTTGATCAAAATGAATATGGCATTGTTGATTTTAAAGAAGGCGTTATTTTGTTAGAAA
AAGGAAAAAGTTCAACACCTGATTCAAAACAGCAGTGGAGAGCATATCGACAAACTTTGATCCCGATCTTAAGTAAAAAC
GATAATTGA

Upstream 100 bases:

>100_bases
ATCGCTTTCAATCCCCCCATGACCGCCACACTTTAGCCATCAATTCCGACGATTCCTAACTCTGATAAGATTTTGGAGAT
TCATTGTTAGGCAGTGTTCT

Downstream 100 bases:

>100_bases
ATATAAAAAAATTACCCCCTAATATCTTTACGGTATTGGGGGTCAACGAGATAATTTAGAGATTCATTTTTGGGTATTCT
GTTTAATCGAGATCAGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MVNLEDIRPVKTPFKQEEWRPILIVSGIFFIICMALVLHRHFTFYSSYDQGIFNQVMWNGAHGRFFQSSLSSQLSTNVVH
AGEVPDVSYHRLGQHFTPALLLWLPIYFFFPHAATLAVLLVTMLSAAGLVLYLLARHYLDPVPARWITYSYYGANAVIGP
TLCNFHDNFQLPLFIFTLLLAMEKRWWWLFGIMCPLIVMIREDSGIVLFGVGAYMILSRRFPKIGAAVCLFSFGYILLLT
NLIMPIFSEDISKRFMLERFGQYTDAAEASTLDILLAMLSNPLLLLRELVTPFDRTIKYLAGQFLPFAFVPAVAPSAWAL
AGFPLLKLLLGKGMSVLSINIRYALAVVPGICYGVILWWSGEGFNNFFRKNQPRHPRQISPFFKKFWITCLTLSIAFTIT
ANPNRTLYFMIPDSLQPWVYVSPIEQWSRSVDIQGMIGRIPQDASVSATTYIIPHLSSRREIIRLPGIEIENDQQNIEKV
DFIVADLWRLVRYQVAFDEDWQRLKDYVGVIDQIVDQNEYGIVDFKEGVILLEKGKSSTPDSKQQWRAYRQTLIPILSKN
DN

Sequences:

>Translated_562_residues
MVNLEDIRPVKTPFKQEEWRPILIVSGIFFIICMALVLHRHFTFYSSYDQGIFNQVMWNGAHGRFFQSSLSSQLSTNVVH
AGEVPDVSYHRLGQHFTPALLLWLPIYFFFPHAATLAVLLVTMLSAAGLVLYLLARHYLDPVPARWITYSYYGANAVIGP
TLCNFHDNFQLPLFIFTLLLAMEKRWWWLFGIMCPLIVMIREDSGIVLFGVGAYMILSRRFPKIGAAVCLFSFGYILLLT
NLIMPIFSEDISKRFMLERFGQYTDAAEASTLDILLAMLSNPLLLLRELVTPFDRTIKYLAGQFLPFAFVPAVAPSAWAL
AGFPLLKLLLGKGMSVLSINIRYALAVVPGICYGVILWWSGEGFNNFFRKNQPRHPRQISPFFKKFWITCLTLSIAFTIT
ANPNRTLYFMIPDSLQPWVYVSPIEQWSRSVDIQGMIGRIPQDASVSATTYIIPHLSSRREIIRLPGIEIENDQQNIEKV
DFIVADLWRLVRYQVAFDEDWQRLKDYVGVIDQIVDQNEYGIVDFKEGVILLEKGKSSTPDSKQQWRAYRQTLIPILSKN
DN
>Mature_562_residues
MVNLEDIRPVKTPFKQEEWRPILIVSGIFFIICMALVLHRHFTFYSSYDQGIFNQVMWNGAHGRFFQSSLSSQLSTNVVH
AGEVPDVSYHRLGQHFTPALLLWLPIYFFFPHAATLAVLLVTMLSAAGLVLYLLARHYLDPVPARWITYSYYGANAVIGP
TLCNFHDNFQLPLFIFTLLLAMEKRWWWLFGIMCPLIVMIREDSGIVLFGVGAYMILSRRFPKIGAAVCLFSFGYILLLT
NLIMPIFSEDISKRFMLERFGQYTDAAEASTLDILLAMLSNPLLLLRELVTPFDRTIKYLAGQFLPFAFVPAVAPSAWAL
AGFPLLKLLLGKGMSVLSINIRYALAVVPGICYGVILWWSGEGFNNFFRKNQPRHPRQISPFFKKFWITCLTLSIAFTIT
ANPNRTLYFMIPDSLQPWVYVSPIEQWSRSVDIQGMIGRIPQDASVSATTYIIPHLSSRREIIRLPGIEIENDQQNIEKV
DFIVADLWRLVRYQVAFDEDWQRLKDYVGVIDQIVDQNEYGIVDFKEGVILLEKGKSSTPDSKQQWRAYRQTLIPILSKN
DN

Specific function: Unknown

COG id: COG3463

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64430; Mature: 64430

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLEDIRPVKTPFKQEEWRPILIVSGIFFIICMALVLHRHFTFYSSYDQGIFNQVMWNG
CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
AHGRFFQSSLSSQLSTNVVHAGEVPDVSYHRLGQHFTPALLLWLPIYFFFPHAATLAVLL
CCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTMLSAAGLVLYLLARHYLDPVPARWITYSYYGANAVIGPTLCNFHDNFQLPLFIFTLLL
HHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCEECCHHCCCCCCCCCHHHHHHHHH
AMEKRWWWLFGIMCPLIVMIREDSGIVLFGVGAYMILSRRFPKIGAAVCLFSFGYILLLT
HHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
NLIMPIFSEDISKRFMLERFGQYTDAAEASTLDILLAMLSNPLLLLRELVTPFDRTIKYL
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHH
AGQFLPFAFVPAVAPSAWALAGFPLLKLLLGKGMSVLSINIRYALAVVPGICYGVILWWS
HHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHEEEEEC
GEGFNNFFRKNQPRHPRQISPFFKKFWITCLTLSIAFTITANPNRTLYFMIPDSLQPWVY
CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCCCEE
VSPIEQWSRSVDIQGMIGRIPQDASVSATTYIIPHLSSRREIIRLPGIEIENDQQNIEKV
ECCHHHHCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEECCCHHHHHHH
DFIVADLWRLVRYQVAFDEDWQRLKDYVGVIDQIVDQNEYGIVDFKEGVILLEKGKSSTP
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCC
DSKQQWRAYRQTLIPILSKNDN
CHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVNLEDIRPVKTPFKQEEWRPILIVSGIFFIICMALVLHRHFTFYSSYDQGIFNQVMWNG
CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
AHGRFFQSSLSSQLSTNVVHAGEVPDVSYHRLGQHFTPALLLWLPIYFFFPHAATLAVLL
CCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTMLSAAGLVLYLLARHYLDPVPARWITYSYYGANAVIGPTLCNFHDNFQLPLFIFTLLL
HHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCEECCHHCCCCCCCCCHHHHHHHHH
AMEKRWWWLFGIMCPLIVMIREDSGIVLFGVGAYMILSRRFPKIGAAVCLFSFGYILLLT
HHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
NLIMPIFSEDISKRFMLERFGQYTDAAEASTLDILLAMLSNPLLLLRELVTPFDRTIKYL
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHH
AGQFLPFAFVPAVAPSAWALAGFPLLKLLLGKGMSVLSINIRYALAVVPGICYGVILWWS
HHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHEEEEEC
GEGFNNFFRKNQPRHPRQISPFFKKFWITCLTLSIAFTITANPNRTLYFMIPDSLQPWVY
CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCCCEE
VSPIEQWSRSVDIQGMIGRIPQDASVSATTYIIPHLSSRREIIRLPGIEIENDQQNIEKV
ECCHHHHCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEECCCHHHHHHH
DFIVADLWRLVRYQVAFDEDWQRLKDYVGVIDQIVDQNEYGIVDFKEGVILLEKGKSSTP
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCC
DSKQQWRAYRQTLIPILSKNDN
CHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA