| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079006
Identifier: 170079006
GI number: 170079006
Start: 2497482
End: 2497718
Strand: Direct
Name: 170079006
Synonym: SYNPCC7002_A2411
Alternate gene names: NA
Gene position: 2497482-2497718 (Clockwise)
Preceding gene: 170079005
Following gene: 170079011
Centisome position: 83.03
GC content: 43.88
Gene sequence:
>237_bases TTGACTATGAAAAATCCTTCCCTGCGCCAAGAACCTCGATACGCGCCTGCTTCCGTGATTGCCCTCGAGCAAAAGACATC ATTACTAGAATGGCTAGAAGAAAACGGTCGCATTATTTACCGCGAGAAAAAAGACGACTTGATCGATGAGATGGCAGACG ATCAAGATTTATCTGAGCTGATGGATGAAGACGGCTTTGAAGATGATGATGACGATGATGATACTGATCTCGATTAA
Upstream 100 bases:
>100_bases ACGGTTTTGGCTTAAAAAATAACCCCATCCAAAGTCCTGCCCGAATCCTGAATGAGCTATACTAAAAAGCTGCTCACATA TCCGTAGCGATCGCCTAGTT
Downstream 100 bases:
>100_bases ACAGAATACCCAAAAATGAATCTCTAAATTATCTCGTTGACCCCCAATACCGTAAAGATATTAGGGGGTAATTTTTTTAT ATTCAATTATCGTTTTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTMKNPSLRQEPRYAPASVIALEQKTSLLEWLEENGRIIYREKKDDLIDEMADDQDLSELMDEDGFEDDDDDDDTDLD
Sequences:
>Translated_78_residues MTMKNPSLRQEPRYAPASVIALEQKTSLLEWLEENGRIIYREKKDDLIDEMADDQDLSELMDEDGFEDDDDDDDTDLD >Mature_77_residues TMKNPSLRQEPRYAPASVIALEQKTSLLEWLEENGRIIYREKKDDLIDEMADDQDLSELMDEDGFEDDDDDDDTDLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9112; Mature: 8981
Theoretical pI: Translated: 3.63; Mature: 3.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMKNPSLRQEPRYAPASVIALEQKTSLLEWLEENGRIIYREKKDDLIDEMADDQDLSEL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHH MDEDGFEDDDDDDDTDLD HHCCCCCCCCCCCCCCCC >Mature Secondary Structure TMKNPSLRQEPRYAPASVIALEQKTSLLEWLEENGRIIYREKKDDLIDEMADDQDLSEL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHH MDEDGFEDDDDDDDTDLD HHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA