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The map label for this gene is ccmk1 [C]

Identifier: 170078984

GI number: 170078984

Start: 2469069

End: 2469899

Strand: Direct

Name: ccmk1 [C]

Synonym: SYNPCC7002_A2389

Alternate gene names: 170078984

Gene position: 2469069-2469899 (Clockwise)

Preceding gene: 170078980

Following gene: 170078985

Centisome position: 82.08

GC content: 53.19

Gene sequence:

>831_bases
ATGAATTTTCCTGCCCGTCGGCAACCCCTCCGCCAAGCACCCCACCGTGCGCATCCGTTTCAAGATTGTGCCTTGGGACT
CGTTTCCACCAAGAGCTTTCCGGCAATTGTGGGCACTGCGGACATGATGCTCAAGTCAGCGGCAGTGACCCTTGTCGGCT
ATGAAAAAACTGGGGGCGGCTATTGTACAGCCGTAGTTCGGGGAAAAACAGCGGATGTTCGCCTGGCCGTCGAAGAAGGG
GCGCGCACTGCAGCTCAGTTTGATCAATACGTTTCTAAATTAGTTATTCCCCGACCGTTGCCAAATCTTGAAGCCATTTT
TCCCATTGGCAGTCACTTGGCAGAAATTGCCCAGCAGCAACGGGGTTATAGTCGTCTGAGTAATCGTTCTATCGGTCTCC
TAGAAACCCGTGGTTTTCCGGCGATGGTGGGGGCTGCCGACGCGATGTTAAAGTCCGCTGATGTACAACTGGCCTCCTAT
GAAACCATCGGTGATGGGCTATGTACGGCGATTATTCGCGGGACTGTTTCCAACGTAGCGATGGCCATTGATGCGGGGAT
GCACGAAGCAGAACGGATCGGTGAGCTCCACGCGGTGATGATTATTCCGCGACTGCTAGAGGATCTAGAGCACACGTTAC
CGGTGGCGGAATACTGGCTAGATAAGGCAGAACCAATGCCAGACCTTGTGAAAGAAAAAGCACCCCAGCGCATCGCCTTA
CCGGAACTAGAACCCGTGTCGGCTCCTTTGGTCATTGAGGCGGAACCAGAAATTGAAAAGGCCGTTGAAGTCGAAATTGT
AGAACCTTTTGATCCGGGCCAGGGCTATTAA

Upstream 100 bases:

>100_bases
CAAAAGTGGAATAACGTAAAATGATAGGTAAATCAGTATTTGCCCGATAAACTTAATCATAAAGCGAGACTGTTCTAAAC
CGATCCTTCCCCCAGTTCCT

Downstream 100 bases:

>100_bases
TTCTGAGACAGGGCTGCTATGGTGACCCTGATGTTTTTTTGACGAACCAATGAGGCTGGTATCCTTCGGCTATGGCTGTT
TCCTCCTGGGAACAGTGGTG

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNFPARRQPLRQAPHRAHPFQDCALGLVSTKSFPAIVGTADMMLKSAAVTLVGYEKTGGGYCTAVVRGKTADVRLAVEEG
ARTAAQFDQYVSKLVIPRPLPNLEAIFPIGSHLAEIAQQQRGYSRLSNRSIGLLETRGFPAMVGAADAMLKSADVQLASY
ETIGDGLCTAIIRGTVSNVAMAIDAGMHEAERIGELHAVMIIPRLLEDLEHTLPVAEYWLDKAEPMPDLVKEKAPQRIAL
PELEPVSAPLVIEAEPEIEKAVEVEIVEPFDPGQGY

Sequences:

>Translated_276_residues
MNFPARRQPLRQAPHRAHPFQDCALGLVSTKSFPAIVGTADMMLKSAAVTLVGYEKTGGGYCTAVVRGKTADVRLAVEEG
ARTAAQFDQYVSKLVIPRPLPNLEAIFPIGSHLAEIAQQQRGYSRLSNRSIGLLETRGFPAMVGAADAMLKSADVQLASY
ETIGDGLCTAIIRGTVSNVAMAIDAGMHEAERIGELHAVMIIPRLLEDLEHTLPVAEYWLDKAEPMPDLVKEKAPQRIAL
PELEPVSAPLVIEAEPEIEKAVEVEIVEPFDPGQGY
>Mature_276_residues
MNFPARRQPLRQAPHRAHPFQDCALGLVSTKSFPAIVGTADMMLKSAAVTLVGYEKTGGGYCTAVVRGKTADVRLAVEEG
ARTAAQFDQYVSKLVIPRPLPNLEAIFPIGSHLAEIAQQQRGYSRLSNRSIGLLETRGFPAMVGAADAMLKSADVQLASY
ETIGDGLCTAIIRGTVSNVAMAIDAGMHEAERIGELHAVMIIPRLLEDLEHTLPVAEYWLDKAEPMPDLVKEKAPQRIAL
PELEPVSAPLVIEAEPEIEKAVEVEIVEPFDPGQGY

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=87, Percent_Identity=48.2758620689655, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 29861; Mature: 29861

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFPARRQPLRQAPHRAHPFQDCALGLVSTKSFPAIVGTADMMLKSAAVTLVGYEKTGGG
CCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCC
YCTAVVRGKTADVRLAVEEGARTAAQFDQYVSKLVIPRPLPNLEAIFPIGSHLAEIAQQQ
EEEEEEECCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHH
RGYSRLSNRSIGLLETRGFPAMVGAADAMLKSADVQLASYETIGDGLCTAIIRGTVSNVA
HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHH
MAIDAGMHEAERIGELHAVMIIPRLLEDLEHTLPVAEYWLDKAEPMPDLVKEKAPQRIAL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCCCC
PELEPVSAPLVIEAEPEIEKAVEVEIVEPFDPGQGY
CCCCCCCCCEEEECCCCHHHCEEEEEECCCCCCCCC
>Mature Secondary Structure
MNFPARRQPLRQAPHRAHPFQDCALGLVSTKSFPAIVGTADMMLKSAAVTLVGYEKTGGG
CCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCC
YCTAVVRGKTADVRLAVEEGARTAAQFDQYVSKLVIPRPLPNLEAIFPIGSHLAEIAQQQ
EEEEEEECCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHH
RGYSRLSNRSIGLLETRGFPAMVGAADAMLKSADVQLASYETIGDGLCTAIIRGTVSNVA
HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHH
MAIDAGMHEAERIGELHAVMIIPRLLEDLEHTLPVAEYWLDKAEPMPDLVKEKAPQRIAL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCCCC
PELEPVSAPLVIEAEPEIEKAVEVEIVEPFDPGQGY
CCCCCCCCCEEEECCCCHHHCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]