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The map label for this gene is nudF [H]

Identifier: 170078978

GI number: 170078978

Start: 2464025

End: 2464717

Strand: Reverse

Name: nudF [H]

Synonym: SYNPCC7002_A2383

Alternate gene names: 170078978

Gene position: 2464717-2464025 (Counterclockwise)

Preceding gene: 170078979

Following gene: 170078977

Centisome position: 81.94

GC content: 49.78

Gene sequence:

>693_bases
ATGTCTTACACTTACGAATATCCAAAACCGAGCGTTACCGTTGACTGTGTTGTTTTCGGCCTTGACGCCACCCATACTCT
GAAAATGATGCTGATTCAGCGGGGCGTTGAACCCTTTAAAGGGGAATGGGCCTTACCGGGGGGGTTTGTACGCCTTGATG
AATCCCTCGAAGAAGCGGCCATGCGCGAACTCCGGGAAGAAACGGGCGTCGAAAAAATATTTCTAGAGCAGCTTTACACC
TTTGGGGCTCCGGATCGTGACCCCCGCGATCGGGTGATTACCGTGGCCTACTATGCTTTGATTAACCTAGAGGATCACCC
AATTCATGCCCAAACGGATGCCGATGCTGTGGCTTGGTTCTCGCTGGATGAACTGCCCAATGTTGCTTTTGATCACCAGC
AAATCATTGATGTGGCGACCCAACGGCTCCAGGGTAAACTCCGCTATGAACCCATTGGCTTTGAGCTGCTGCCCCGCAAA
TTTACCTTGACCCAACTCCAAAAACTCTACGAGCAGATTTTAGGAACCCAGTTAGATAAGCGGAACTTCCGGCGCAAAAT
CCTTAAAATGGATCTCCTAATTAAATTAGATGAGTTGCAAACTGGGGTCGCCCACCGTGCGGCACGGCTTTACTCCTTTG
ATGAGGCTAAATATCAACGGCTCAAGGAGGCTGGCTTTAATTTCGAGCTTTAA

Upstream 100 bases:

>100_bases
GGGGCTTCCATGTCTACCGCGAAAACCTGATTCCCCAGGCCCAAGCGAGCTAACCATTACTTCTACTTTTTAAAAGAAAC
CCATAAAACCCATAAATCCT

Downstream 100 bases:

>100_bases
GGCAGGTTTGGAGATCGTTCAGTTTGTCAGAGTCGCATCATTTTGAAGGCGATCGCCAAAAGTAGATGGAACCCATCGAG
GAAAAACGCGATCCGAGTCT

Product: Nudix hydrolase family protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSYTYEYPKPSVTVDCVVFGLDATHTLKMMLIQRGVEPFKGEWALPGGFVRLDESLEEAAMRELREETGVEKIFLEQLYT
FGAPDRDPRDRVITVAYYALINLEDHPIHAQTDADAVAWFSLDELPNVAFDHQQIIDVATQRLQGKLRYEPIGFELLPRK
FTLTQLQKLYEQILGTQLDKRNFRRKILKMDLLIKLDELQTGVAHRAARLYSFDEAKYQRLKEAGFNFEL

Sequences:

>Translated_230_residues
MSYTYEYPKPSVTVDCVVFGLDATHTLKMMLIQRGVEPFKGEWALPGGFVRLDESLEEAAMRELREETGVEKIFLEQLYT
FGAPDRDPRDRVITVAYYALINLEDHPIHAQTDADAVAWFSLDELPNVAFDHQQIIDVATQRLQGKLRYEPIGFELLPRK
FTLTQLQKLYEQILGTQLDKRNFRRKILKMDLLIKLDELQTGVAHRAARLYSFDEAKYQRLKEAGFNFEL
>Mature_229_residues
SYTYEYPKPSVTVDCVVFGLDATHTLKMMLIQRGVEPFKGEWALPGGFVRLDESLEEAAMRELREETGVEKIFLEQLYTF
GAPDRDPRDRVITVAYYALINLEDHPIHAQTDADAVAWFSLDELPNVAFDHQQIIDVATQRLQGKLRYEPIGFELLPRKF
TLTQLQKLYEQILGTQLDKRNFRRKILKMDLLIKLDELQTGVAHRAARLYSFDEAKYQRLKEAGFNFEL

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 26705; Mature: 26574

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTYEYPKPSVTVDCVVFGLDATHTLKMMLIQRGVEPFKGEWALPGGFVRLDESLEEAA
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHH
MRELREETGVEKIFLEQLYTFGAPDRDPRDRVITVAYYALINLEDHPIHAQTDADAVAWF
HHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHEEEEEHEEEEECCCCCCCCCCCCCCEEEE
SLDELPNVAFDHQQIIDVATQRLQGKLRYEPIGFELLPRKFTLTQLQKLYEQILGTQLDK
EHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCHHHH
RNFRRKILKMDLLIKLDELQTGVAHRAARLYSFDEAKYQRLKEAGFNFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SYTYEYPKPSVTVDCVVFGLDATHTLKMMLIQRGVEPFKGEWALPGGFVRLDESLEEAA
CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHH
MRELREETGVEKIFLEQLYTFGAPDRDPRDRVITVAYYALINLEDHPIHAQTDADAVAWF
HHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHEEEEEHEEEEECCCCCCCCCCCCCCEEEE
SLDELPNVAFDHQQIIDVATQRLQGKLRYEPIGFELLPRKFTLTQLQKLYEQILGTQLDK
EHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCHHHH
RNFRRKILKMDLLIKLDELQTGVAHRAARLYSFDEAKYQRLKEAGFNFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]