| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is bicA [H]
Identifier: 170078966
GI number: 170078966
Start: 2452833
End: 2454533
Strand: Direct
Name: bicA [H]
Synonym: SYNPCC7002_A2371
Alternate gene names: 170078966
Gene position: 2452833-2454533 (Clockwise)
Preceding gene: 170078964
Following gene: 170078967
Centisome position: 81.54
GC content: 53.79
Gene sequence:
>1701_bases ATGCAGATAACCAACAAAATTCACTTTAGGAATATCCGCGGCGATATTTTTGGCGGGCTAACGGCGGCGGTCATTGCGTT GCCCATGGCCCTCGCCTTCGGGGTGGCATCCGGTGCCGGGGCAGAAGCCGGTCTCTGGGGTGCTGTGCTTGTGGGCTTCT TTGCCGCCCTCTTTGGGGGAACCCCCACCCTCATTTCCGAACCCACAGGGCCGATGACGGTGGTTATGACCGCTGTGATT GCCCATTTCACGGCCAGCGCCGCTACTCCAGAAGAAGGTTTGGCGATCGCCTTTACCGTCGTGATGATGGCCGGGGTGTT CCAAATTATTTTTGGCTCCCTCAAACTCGGCAAATACGTCACCATGATGCCCTACACCGTGATTTCTGGCTTCATGTCAG GGATCGGGATCATCCTGGTCATTTTGCAATTAGCGCCCTTCCTGGGACAGGCGAGTCCGGGGGGCGGCGTCATCGGCACG CTCCAAAATTTACCCACACTGCTGAGTAATATTCAACCGGGCGAAACAGCCTTAGCTTTAGGCACCGTGGCGATCATCTG GTTTATGCCAGAGAAGTTTAAAAAGGTAATCCCGCCCCAATTGGTCGCCCTTGTCTTGGGGACAGTAATCGCCTTTTTTG TTTTCCCGCCAGAAGTAAGCGATCTCCGTCGCATCGGTGAAATTCGAGCTGGGTTCCCAGAGCTGGTCAGACCGAGCTTT AGTCCGGTTGAATTCCAGAGAATGATCCTCGATGCGGCAGTGCTAGGGATGCTCGGTTGTATCGATGCCCTCTTGACGTC TGTCGTCGCCGATAGCTTGACCCGGACAGAGCATAATTCCAACAAAGAATTAATTGGCCAAGGTCTAGGGAACCTCTTTT CTGGCTTGTTCGGCGGGATTGCTGGGGCTGGGGCCACCATGGGGACTGTGGTAAATATCCAGTCCGGTGGTCGAACGGCG CTTTCTGGATTGGTACGGGCCTTTGTCCTGTTGGTTGTGATCCTTGGGGCGGCTAGTTTAACGGCAACCATCCCCCTGGC TGTGCTTGCTGGGATTGCCTTCAAGGTCGGGGTTGACATCATTGACTGGAGTTTCCTAAAACGGGCCCACGAAATTTCCC CCAAGGGGGCACTGATCATGTACGGCGTCATTCTGTTGACGGTCTTAGTTGACTTGATTGTCGCCGTGGGTGTGGGTGTG TTTGTCGCTAATGTGCTCACCATCGAACGGATGAGTAATCTCCAGTCTGAAAAAGTCCAAACGGTTAGTGATGCTGACGA TAATATCCGCCTGACTACCACTGAAAAACGCTGGTTGGATGAAGGCCAAGGCCGTGTTCTTTTGTTTCAACTCAGTGGGC CGATGATCTTTGGGGTCGCAAAGGCGATCGCCAGAGAACACAATGCGATGGGTGACTGTGATGCCCTCGTCTTTGATATC GGTGAAGTGCCCCACATGGGGGTTACCGCTTCCCTAGCCTTAGAAAATGCCATTGAAGAGGCCCTCGACAAAGAACGTCA GGTTTATATTGTCGGTGCTGCGGGCCAAACCCGTCGCCGTCTGGAAAAACTCAAGCTCTTTAAGCGGGTTCCCCCCGATA AATGTTTGATGTCGCGGGAAGAAGCCCTCAAGAATGCCGTGCTCGGAATCTATCCCCATTTGGCGGATGGTGTTACGGCT CCCAGTTCAGAGATGGGTTAA
Upstream 100 bases:
>100_bases TTGCACTGACAACTTAACTCACACCCAACAGGCTAAGCAACGAATCCTTTATGGTTTGTTTAAGTGCTTTGCTCATCACT GATCTGAAAAATGCGTAACC
Downstream 100 bases:
>100_bases GGCCCTGATCTGCGGTGGGTTCCTGGCTATCTTGGTCTAACCTTCCGGCTTATCTCAGGACGGTATGGTCGGCAGATAGC CCTCTCCAGGTTCGATGCAA
Product: bicarbonate transporter, BicA
Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MQITNKIHFRNIRGDIFGGLTAAVIALPMALAFGVASGAGAEAGLWGAVLVGFFAALFGGTPTLISEPTGPMTVVMTAVI AHFTASAATPEEGLAIAFTVVMMAGVFQIIFGSLKLGKYVTMMPYTVISGFMSGIGIILVILQLAPFLGQASPGGGVIGT LQNLPTLLSNIQPGETALALGTVAIIWFMPEKFKKVIPPQLVALVLGTVIAFFVFPPEVSDLRRIGEIRAGFPELVRPSF SPVEFQRMILDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLFSGLFGGIAGAGATMGTVVNIQSGGRTA LSGLVRAFVLLVVILGAASLTATIPLAVLAGIAFKVGVDIIDWSFLKRAHEISPKGALIMYGVILLTVLVDLIVAVGVGV FVANVLTIERMSNLQSEKVQTVSDADDNIRLTTTEKRWLDEGQGRVLLFQLSGPMIFGVAKAIAREHNAMGDCDALVFDI GEVPHMGVTASLALENAIEEALDKERQVYIVGAAGQTRRRLEKLKLFKRVPPDKCLMSREEALKNAVLGIYPHLADGVTA PSSEMG
Sequences:
>Translated_566_residues MQITNKIHFRNIRGDIFGGLTAAVIALPMALAFGVASGAGAEAGLWGAVLVGFFAALFGGTPTLISEPTGPMTVVMTAVI AHFTASAATPEEGLAIAFTVVMMAGVFQIIFGSLKLGKYVTMMPYTVISGFMSGIGIILVILQLAPFLGQASPGGGVIGT LQNLPTLLSNIQPGETALALGTVAIIWFMPEKFKKVIPPQLVALVLGTVIAFFVFPPEVSDLRRIGEIRAGFPELVRPSF SPVEFQRMILDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLFSGLFGGIAGAGATMGTVVNIQSGGRTA LSGLVRAFVLLVVILGAASLTATIPLAVLAGIAFKVGVDIIDWSFLKRAHEISPKGALIMYGVILLTVLVDLIVAVGVGV FVANVLTIERMSNLQSEKVQTVSDADDNIRLTTTEKRWLDEGQGRVLLFQLSGPMIFGVAKAIAREHNAMGDCDALVFDI GEVPHMGVTASLALENAIEEALDKERQVYIVGAAGQTRRRLEKLKLFKRVPPDKCLMSREEALKNAVLGIYPHLADGVTA PSSEMG >Mature_566_residues MQITNKIHFRNIRGDIFGGLTAAVIALPMALAFGVASGAGAEAGLWGAVLVGFFAALFGGTPTLISEPTGPMTVVMTAVI AHFTASAATPEEGLAIAFTVVMMAGVFQIIFGSLKLGKYVTMMPYTVISGFMSGIGIILVILQLAPFLGQASPGGGVIGT LQNLPTLLSNIQPGETALALGTVAIIWFMPEKFKKVIPPQLVALVLGTVIAFFVFPPEVSDLRRIGEIRAGFPELVRPSF SPVEFQRMILDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLFSGLFGGIAGAGATMGTVVNIQSGGRTA LSGLVRAFVLLVVILGAASLTATIPLAVLAGIAFKVGVDIIDWSFLKRAHEISPKGALIMYGVILLTVLVDLIVAVGVGV FVANVLTIERMSNLQSEKVQTVSDADDNIRLTTTEKRWLDEGQGRVLLFQLSGPMIFGVAKAIAREHNAMGDCDALVFDI GEVPHMGVTASLALENAIEEALDKERQVYIVGAAGQTRRRLEKLKLFKRVPPDKCLMSREEALKNAVLGIYPHLADGVTA PSSEMG
Specific function: Possible Sulfate Transporter. [C]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI4557535, Length=376, Percent_Identity=24.468085106383, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI20336282, Length=549, Percent_Identity=22.5865209471767, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI16306483, Length=549, Percent_Identity=22.5865209471767, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI16418413, Length=366, Percent_Identity=22.9508196721311, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI217272867, Length=366, Percent_Identity=22.9508196721311, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI4505697, Length=375, Percent_Identity=22.6666666666667, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI87081859, Length=430, Percent_Identity=30, Blast_Score=151, Evalue=1e-37, Organism=Caenorhabditis elegans, GI86564876, Length=515, Percent_Identity=23.1067961165049, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI86564196, Length=530, Percent_Identity=22.6415094339623, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI86565215, Length=368, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17551690, Length=382, Percent_Identity=21.4659685863874, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203292, Length=508, Percent_Identity=21.6535433070866, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6325260, Length=578, Percent_Identity=19.3771626297578, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI19922482, Length=512, Percent_Identity=23.6328125, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24651449, Length=439, Percent_Identity=23.9179954441913, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24666186, Length=410, Percent_Identity=22.9268292682927, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24647160, Length=440, Percent_Identity=20.2272727272727, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI21355087, Length=440, Percent_Identity=20.2272727272727, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI21358633, Length=427, Percent_Identity=22.9508196721311, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 [H]
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]
EC number: NA
Molecular weight: Translated: 59606; Mature: 59606
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQITNKIHFRNIRGDIFGGLTAAVIALPMALAFGVASGAGAEAGLWGAVLVGFFAALFGG CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC TPTLISEPTGPMTVVMTAVIAHFTASAATPEEGLAIAFTVVMMAGVFQIIFGSLKLGKYV CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH TMMPYTVISGFMSGIGIILVILQLAPFLGQASPGGGVIGTLQNLPTLLSNIQPGETALAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHH GTVAIIWFMPEKFKKVIPPQLVALVLGTVIAFFVFPPEVSDLRRIGEIRAGFPELVRPSF HHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCC SPVEFQRMILDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLFSGLFGGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AGAGATMGTVVNIQSGGRTALSGLVRAFVLLVVILGAASLTATIPLAVLAGIAFKVGVDI HCCCCHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH IDWSFLKRAHEISPKGALIMYGVILLTVLVDLIVAVGVGVFVANVLTIERMSNLQSEKVQ HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TVSDADDNIRLTTTEKRWLDEGQGRVLLFQLSGPMIFGVAKAIAREHNAMGDCDALVFDI HHCCCCCCEEEEECHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHC GEVPHMGVTASLALENAIEEALDKERQVYIVGAAGQTRRRLEKLKLFKRVPPDKCLMSRE CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHH EALKNAVLGIYPHLADGVTAPSSEMG HHHHHHHHHHCHHHHCCCCCCCCCCC >Mature Secondary Structure MQITNKIHFRNIRGDIFGGLTAAVIALPMALAFGVASGAGAEAGLWGAVLVGFFAALFGG CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC TPTLISEPTGPMTVVMTAVIAHFTASAATPEEGLAIAFTVVMMAGVFQIIFGSLKLGKYV CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH TMMPYTVISGFMSGIGIILVILQLAPFLGQASPGGGVIGTLQNLPTLLSNIQPGETALAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHH GTVAIIWFMPEKFKKVIPPQLVALVLGTVIAFFVFPPEVSDLRRIGEIRAGFPELVRPSF HHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCC SPVEFQRMILDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLFSGLFGGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AGAGATMGTVVNIQSGGRTALSGLVRAFVLLVVILGAASLTATIPLAVLAGIAFKVGVDI HCCCCHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH IDWSFLKRAHEISPKGALIMYGVILLTVLVDLIVAVGVGVFVANVLTIERMSNLQSEKVQ HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TVSDADDNIRLTTTEKRWLDEGQGRVLLFQLSGPMIFGVAKAIAREHNAMGDCDALVFDI HHCCCCCCEEEEECHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHC GEVPHMGVTASLALENAIEEALDKERQVYIVGAAGQTRRRLEKLKLFKRVPPDKCLMSRE CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHH EALKNAVLGIYPHLADGVTAPSSEMG HHHHHHHHHHCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]
Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]