Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078953

Identifier: 170078953

GI number: 170078953

Start: 2440061

End: 2440894

Strand: Direct

Name: 170078953

Synonym: SYNPCC7002_A2358

Alternate gene names: NA

Gene position: 2440061-2440894 (Clockwise)

Preceding gene: 170078952

Following gene: 170078957

Centisome position: 81.12

GC content: 54.56

Gene sequence:

>834_bases
ATGAAGGAGACAGCGATCCATTCCCCCATCCCCCAGCAAGAATACCTCGCCCAAATTGGTGTCCAGTTGCAGCAACAACG
CCTCGCCAAAGACTGGTCCCTCGCCTTTGTGTCCCGTAAAACGAACATTCGTCGGGCACTCCTTGAAAATATTGAAGCGG
GTCGCCTAGAGCAACTCCCAGAACCGGTTTATCTCCAAGGTCTCCTGCGTTGCTATGCGGAATGTCTTGGCCTCGATGGA
ACGGCGATCGCCCAGGAATTTCCCCAAGCCGAAACCCAAAATCGTTGGCATATTCCCCGTTGGAGCCAATTTATTTACCA
TTTCCAGTTGCGGCCGAGTCATCTGTACCTTGCCTATTTGTTGATCATTGTTGCCACGGTGCAATCCCTGGGCAACATCG
TCCGCAACCAAAACCCCAGTCTGACGCCCCAACTTGATCCAGCTCTCCTGGAGAGCACAACCCCAGCCCGCCAGGAACGT
AACACAGCCCAGACCACAGCACTATCCCCGTCAGTCACCGCCCCGATCGACCCCAACAACAATGGGGCAGATGTACCAGA
GTCCGTGGTGGTGGATATTCGCGCCCAGGAAATGGCCTGGATGCGCGTCGAAATCGATGGTCAAACGGCCTTTGAAGGCA
CCCTCGCCAAGGGCACCCAAAAACAATGGATTGCCGATGAAAGTGTGCGCGTCCGTTCCGGCAATGCAGGGGCTGTTTAC
ATTACCATCAACAACCAGCAACCCCACCGTTTAGGGGAACCCGGTGCCGTCGAAGAATTTACTTACCAGGCTAAAGCAGA
CAACAACAAGCCCAAAACCCAAGCGTCTTCCTAG

Upstream 100 bases:

>100_bases
AAGCCCGTCCCCTAACGAAAGCGGAGATCAAACAGCTCCGATCCCAATATAATTCTAATTTCCCATTCCATTCATCCGCC
CCAGTCCGGGAGTACCAAGC

Downstream 100 bases:

>100_bases
AGTTAACCCTCTAGCTCTGTGCTGAGTTGGTAGATATGGCGGCGGGATAAATTCAGCTGTTGGGCGAGGGTGCGGCTAGC
CCCAGAACGACTCATGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKETAIHSPIPQQEYLAQIGVQLQQQRLAKDWSLAFVSRKTNIRRALLENIEAGRLEQLPEPVYLQGLLRCYAECLGLDG
TAIAQEFPQAETQNRWHIPRWSQFIYHFQLRPSHLYLAYLLIIVATVQSLGNIVRNQNPSLTPQLDPALLESTTPARQER
NTAQTTALSPSVTAPIDPNNNGADVPESVVVDIRAQEMAWMRVEIDGQTAFEGTLAKGTQKQWIADESVRVRSGNAGAVY
ITINNQQPHRLGEPGAVEEFTYQAKADNNKPKTQASS

Sequences:

>Translated_277_residues
MKETAIHSPIPQQEYLAQIGVQLQQQRLAKDWSLAFVSRKTNIRRALLENIEAGRLEQLPEPVYLQGLLRCYAECLGLDG
TAIAQEFPQAETQNRWHIPRWSQFIYHFQLRPSHLYLAYLLIIVATVQSLGNIVRNQNPSLTPQLDPALLESTTPARQER
NTAQTTALSPSVTAPIDPNNNGADVPESVVVDIRAQEMAWMRVEIDGQTAFEGTLAKGTQKQWIADESVRVRSGNAGAVY
ITINNQQPHRLGEPGAVEEFTYQAKADNNKPKTQASS
>Mature_277_residues
MKETAIHSPIPQQEYLAQIGVQLQQQRLAKDWSLAFVSRKTNIRRALLENIEAGRLEQLPEPVYLQGLLRCYAECLGLDG
TAIAQEFPQAETQNRWHIPRWSQFIYHFQLRPSHLYLAYLLIIVATVQSLGNIVRNQNPSLTPQLDPALLESTTPARQER
NTAQTTALSPSVTAPIDPNNNGADVPESVVVDIRAQEMAWMRVEIDGQTAFEGTLAKGTQKQWIADESVRVRSGNAGAVY
ITINNQQPHRLGEPGAVEEFTYQAKADNNKPKTQASS

Specific function: Unknown

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30950; Mature: 30950

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETAIHSPIPQQEYLAQIGVQLQQQRLAKDWSLAFVSRKTNIRRALLENIEAGRLEQLP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
EPVYLQGLLRCYAECLGLDGTAIAQEFPQAETQNRWHIPRWSQFIYHFQLRPSHLYLAYL
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHEEEEEECCCCHHHHHHH
LIIVATVQSLGNIVRNQNPSLTPQLDPALLESTTPARQERNTAQTTALSPSVTAPIDPNN
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHCCHHHHHCCCCCCCCCCCCCC
NGADVPESVVVDIRAQEMAWMRVEIDGQTAFEGTLAKGTQKQWIADESVRVRSGNAGAVY
CCCCCCCHHEEEEECCCEEEEEEEECCCCCCCCHHCCCCCHHHCCCCCEEEECCCCCEEE
ITINNQQPHRLGEPGAVEEFTYQAKADNNKPKTQASS
EEECCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKETAIHSPIPQQEYLAQIGVQLQQQRLAKDWSLAFVSRKTNIRRALLENIEAGRLEQLP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
EPVYLQGLLRCYAECLGLDGTAIAQEFPQAETQNRWHIPRWSQFIYHFQLRPSHLYLAYL
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHEEEEEECCCCHHHHHHH
LIIVATVQSLGNIVRNQNPSLTPQLDPALLESTTPARQERNTAQTTALSPSVTAPIDPNN
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHCCHHHHHCCCCCCCCCCCCCC
NGADVPESVVVDIRAQEMAWMRVEIDGQTAFEGTLAKGTQKQWIADESVRVRSGNAGAVY
CCCCCCCHHEEEEECCCEEEEEEEECCCCCCCCHHCCCCCHHHCCCCCEEEECCCCCEEE
ITINNQQPHRLGEPGAVEEFTYQAKADNNKPKTQASS
EEECCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA