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The map label for this gene is rsuA [C]

Identifier: 170078952

GI number: 170078952

Start: 2439285

End: 2440064

Strand: Direct

Name: rsuA [C]

Synonym: SYNPCC7002_A2357

Alternate gene names: 170078952

Gene position: 2439285-2440064 (Clockwise)

Preceding gene: 170078951

Following gene: 170078953

Centisome position: 81.09

GC content: 54.36

Gene sequence:

>780_bases
ATGGCTGAAAGGGTGCAAAAAATTCTCGCCCGTTGGGGCATTGCGTCACGGCGGGGAGCAGAAAAACTCATTCTCGCTGG
ACGGGTGACCCTCAATGGCAAACCCGTTCAATTGGGGGATCAAGCGGATCCAGAAGGCGATCGCCTCTGTGTTGACGGGA
AACCCCTCAAGGCGACCGAACGCCCGCGACATTACTATTACCTAATCCACAAACCCAAGGGTGTGGTTTCCACCTGCGCT
GATCCCAAGGGACGATCGACGGTTTTAGATTTGCTGCCCCCTCCGCTACGGCAAGGAAAGGGAATCCATCCCATCGGCCG
CCTCGATGCCCAATCCACAGGGGCGTTGCTGCTGACCAATGACGGTAATTTCACCCTGGCCTTGACTCATCCTCGATACC
ACATTCCCAAAACCTATCGCGTTTGGCTCAAGGGGAAAGTACCAGAACATGTCCTCGATCAGTGGCGTCAGGGGGTAATG
TTGGGCGATCGCCGTACCTTGCCCACCCAAATTCACCTCAAAACCATTACCCAAGATAAAACCTGTATTGATATCATGCT
TACCGAAGGGCGCAACCGCCAGATCCGTCGGGTCGCTGAACAGCTCGGTTTTCCTGTGGTAAAACTCCATCGTCTCGCCA
TTGGTAACCTACACCTGGGCGATCTGCAACGGGGCCAAGCCCGTCCCCTAACGAAAGCGGAGATCAAACAGCTCCGATCC
CAATATAATTCTAATTTCCCATTCCATTCATCCGCCCCAGTCCGGGAGTACCAAGCATGA

Upstream 100 bases:

>100_bases
TTGATTTTAGGTATTTATGCGGGGAAACAACACCTGCTAAGATTTGTAAAATATGACTTGCAATTTTCCTGGCTTTTTAG
AAACCAGCACTCCATAATCT

Downstream 100 bases:

>100_bases
AGGAGACAGCGATCCATTCCCCCATCCCCCAGCAAGAATACCTCGCCCAAATTGGTGTCCAGTTGCAGCAACAACGCCTC
GCCAAAGACTGGTCCCTCGC

Product: RNA pseudouridylate synthase

Products: NA

Alternate protein names: RNA pseudouridylate synthase; RNA-uridine isomerase [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MAERVQKILARWGIASRRGAEKLILAGRVTLNGKPVQLGDQADPEGDRLCVDGKPLKATERPRHYYYLIHKPKGVVSTCA
DPKGRSTVLDLLPPPLRQGKGIHPIGRLDAQSTGALLLTNDGNFTLALTHPRYHIPKTYRVWLKGKVPEHVLDQWRQGVM
LGDRRTLPTQIHLKTITQDKTCIDIMLTEGRNRQIRRVAEQLGFPVVKLHRLAIGNLHLGDLQRGQARPLTKAEIKQLRS
QYNSNFPFHSSAPVREYQA

Sequences:

>Translated_259_residues
MAERVQKILARWGIASRRGAEKLILAGRVTLNGKPVQLGDQADPEGDRLCVDGKPLKATERPRHYYYLIHKPKGVVSTCA
DPKGRSTVLDLLPPPLRQGKGIHPIGRLDAQSTGALLLTNDGNFTLALTHPRYHIPKTYRVWLKGKVPEHVLDQWRQGVM
LGDRRTLPTQIHLKTITQDKTCIDIMLTEGRNRQIRRVAEQLGFPVVKLHRLAIGNLHLGDLQRGQARPLTKAEIKQLRS
QYNSNFPFHSSAPVREYQA
>Mature_258_residues
AERVQKILARWGIASRRGAEKLILAGRVTLNGKPVQLGDQADPEGDRLCVDGKPLKATERPRHYYYLIHKPKGVVSTCAD
PKGRSTVLDLLPPPLRQGKGIHPIGRLDAQSTGALLLTNDGNFTLALTHPRYHIPKTYRVWLKGKVPEHVLDQWRQGVML
GDRRTLPTQIHLKTITQDKTCIDIMLTEGRNRQIRRVAEQLGFPVVKLHRLAIGNLHLGDLQRGQARPLTKAEIKQLRSQ
YNSNFPFHSSAPVREYQA

Specific function: Unknown

COG id: COG1187

COG function: function code J; 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787524, Length=244, Percent_Identity=36.0655737704918, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1788510, Length=237, Percent_Identity=36.2869198312236, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1790453, Length=236, Percent_Identity=33.4745762711864, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI87081838, Length=179, Percent_Identity=34.6368715083799, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020103
- InterPro:   IPR006145
- InterPro:   IPR000748
- InterPro:   IPR018496
- InterPro:   IPR002942 [H]

Pfam domain/function: PF00849 PseudoU_synth_2; PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 29191; Mature: 29060

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: PS50889 S4 ; PS01149 PSI_RSU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERVQKILARWGIASRRGAEKLILAGRVTLNGKPVQLGDQADPEGDRLCVDGKPLKATE
CHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCEEEECCCCCCCCC
RPRHYYYLIHKPKGVVSTCADPKGRSTVLDLLPPPLRQGKGIHPIGRLDAQSTGALLLTN
CCCEEEEEEECCCCCCCCCCCCCCCCEEHCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEC
DGNFTLALTHPRYHIPKTYRVWLKGKVPEHVLDQWRQGVMLGDRRTLPTQIHLKTITQDK
CCCEEEEEECCCEECCCEEEEEEECCCCHHHHHHHHCCCEECCCCCCCEEEEEEEECCCC
TCIDIMLTEGRNRQIRRVAEQLGFPVVKLHRLAIGNLHLGDLQRGQARPLTKAEIKQLRS
EEEEEEEECCCCHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
QYNSNFPFHSSAPVREYQA
HHCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
AERVQKILARWGIASRRGAEKLILAGRVTLNGKPVQLGDQADPEGDRLCVDGKPLKATE
HHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCEEEECCCCCCCCC
RPRHYYYLIHKPKGVVSTCADPKGRSTVLDLLPPPLRQGKGIHPIGRLDAQSTGALLLTN
CCCEEEEEEECCCCCCCCCCCCCCCCEEHCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEC
DGNFTLALTHPRYHIPKTYRVWLKGKVPEHVLDQWRQGVMLGDRRTLPTQIHLKTITQDK
CCCEEEEEECCCEECCCEEEEEEECCCCHHHHHHHHCCCEECCCCCCCEEEEEEEECCCC
TCIDIMLTEGRNRQIRRVAEQLGFPVVKLHRLAIGNLHLGDLQRGQARPLTKAEIKQLRS
EEEEEEEECCCCHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
QYNSNFPFHSSAPVREYQA
HHCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]