Click here to switch to the map view.

The map label for this gene is ureF

Identifier: 170078924

GI number: 170078924

Start: 2407157

End: 2407834

Strand: Direct

Name: ureF

Synonym: SYNPCC7002_A2329

Alternate gene names: 170078924

Gene position: 2407157-2407834 (Clockwise)

Preceding gene: 170078923

Following gene: 170078925

Centisome position: 80.02

GC content: 49.12

Gene sequence:

>678_bases
GTGCAACAACTCATTCTCTGGCAACTGATTAATTCAAACTTTCCCCTTGGAGCCTATAACTATTCGGAGGGTTTGGAATA
TTTGGTAGAGTCGGCTGGATGTTCTGAGGTAGAAAGCTTTCAGGATTGGTTGGGGTTGCACCTGCGCTATGGTTCGATCC
GCGCTGAAGTGAGCATTGTGCTGAGGATTGTACAGGCGATCGCCTCCGGGGATTTTAATCAGCTCCAATATTGGAATACC
TGGCTCAACGGCACCCGGGAGACGCGGGAACTCCGGCAACAAAGTATCCAGATGGGCAATAGTTTATTGAAACTGTTGGG
AGATTTAGACGAAAACAAACGACCGCAGCTAGGGGCTTGCCGGGAGCAGATCGGCAAAAGCTGCCATTATGCGATCGCCT
TTGGGATAGCGATCGCCCTCTGGGACATTGAGTCGCACCAGGCCGTTTTAGGTTATCTTCATAGCTGGCTGAGTAACTTG
GTGAGTGCGGGGGTGAAGTTGATTCCCCTCGGACAAACCCAAGGCCAACGGATCATCTACCAGTTACAACCCCTAATTAT
TGAGACAGTAGAGACTGTAGTAACGCAAAAAGAGATGGATCTTTATGCCTGTACCTGGGGTTTAAGTTTGGCGAGTATGA
ATCACGAAACCCAATACACTCGCCTTTTTCGGAGTTGA

Upstream 100 bases:

>100_bases
TCCTCGAAAATTATCAACAGCCGAACGGAACGGTAGCTGTGCCAGAGGTGCTGCGGCCCTACCTTAAGCGTGATTTTCTC
TAGTCCATCCGAGGTCACTG

Downstream 100 bases:

>100_bases
CCCCCAGGGGTTAAGATAAGGGGCATTCTTTTTTTCGGTGAATGGCTCAATGACGATGCACCTCAAGCTCGGCTGGCTCT
ACCCCACCCTCATGGGCACC

Product: urease accessory protein, UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MQQLILWQLINSNFPLGAYNYSEGLEYLVESAGCSEVESFQDWLGLHLRYGSIRAEVSIVLRIVQAIASGDFNQLQYWNT
WLNGTRETRELRQQSIQMGNSLLKLLGDLDENKRPQLGACREQIGKSCHYAIAFGIAIALWDIESHQAVLGYLHSWLSNL
VSAGVKLIPLGQTQGQRIIYQLQPLIIETVETVVTQKEMDLYACTWGLSLASMNHETQYTRLFRS

Sequences:

>Translated_225_residues
MQQLILWQLINSNFPLGAYNYSEGLEYLVESAGCSEVESFQDWLGLHLRYGSIRAEVSIVLRIVQAIASGDFNQLQYWNT
WLNGTRETRELRQQSIQMGNSLLKLLGDLDENKRPQLGACREQIGKSCHYAIAFGIAIALWDIESHQAVLGYLHSWLSNL
VSAGVKLIPLGQTQGQRIIYQLQPLIIETVETVVTQKEMDLYACTWGLSLASMNHETQYTRLFRS
>Mature_225_residues
MQQLILWQLINSNFPLGAYNYSEGLEYLVESAGCSEVESFQDWLGLHLRYGSIRAEVSIVLRIVQAIASGDFNQLQYWNT
WLNGTRETRELRQQSIQMGNSLLKLLGDLDENKRPQLGACREQIGKSCHYAIAFGIAIALWDIESHQAVLGYLHSWLSNL
VSAGVKLIPLGQTQGQRIIYQLQPLIIETVETVVTQKEMDLYACTWGLSLASMNHETQYTRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_SYNP2 (B1XJM1)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001735562.1
- GeneID:   6057774
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A2329
- HOGENOM:   HBG709295
- OMA:   SPQLPIG
- ProtClustDB:   CLSK892793
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 25570; Mature: 25570

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLILWQLINSNFPLGAYNYSEGLEYLVESAGCSEVESFQDWLGLHLRYGSIRAEVSIV
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
LRIVQAIASGDFNQLQYWNTWLNGTRETRELRQQSIQMGNSLLKLLGDLDENKRPQLGAC
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
REQIGKSCHYAIAFGIAIALWDIESHQAVLGYLHSWLSNLVSAGVKLIPLGQTQGQRIIY
HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHH
QLQPLIIETVETVVTQKEMDLYACTWGLSLASMNHETQYTRLFRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MQQLILWQLINSNFPLGAYNYSEGLEYLVESAGCSEVESFQDWLGLHLRYGSIRAEVSIV
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
LRIVQAIASGDFNQLQYWNTWLNGTRETRELRQQSIQMGNSLLKLLGDLDENKRPQLGAC
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
REQIGKSCHYAIAFGIAIALWDIESHQAVLGYLHSWLSNLVSAGVKLIPLGQTQGQRIIY
HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHH
QLQPLIIETVETVVTQKEMDLYACTWGLSLASMNHETQYTRLFRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA