Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078907

Identifier: 170078907

GI number: 170078907

Start: 2390951

End: 2391358

Strand: Reverse

Name: 170078907

Synonym: SYNPCC7002_A2312

Alternate gene names: NA

Gene position: 2391358-2390951 (Counterclockwise)

Preceding gene: 170078908

Following gene: 170078905

Centisome position: 79.5

GC content: 43.87

Gene sequence:

>408_bases
ATGGAACGACTGGTACTCGATGCAGGCCCTCTGATTGCCCTCGTTTCTCGCCAGGATCGATATCATGAGCTAGCTCAGTC
CGGCTTTACCCAAATCCCAAAAGCTTTTGGAGAGATCATTACCCCTTTACCGATTGTTTTTGAGGTTTACAAATTTGTTT
CACGCCGTGAGTCAATTCAAGCGGCTCAATTCCTTTTGACAACTTTGCAGACAAATACAGTCATTCAGACTATTTCTCCA
ACGGATTTTCAAGAGATTTACGAACTCAGCATTCGTTCACCCCAATGGCGAGGCAGTTTAGAAGATGCTTCTGTGCTGGT
TGTAGCAAAACAAATGCAAGCAAAGGTTTGGACAATTGATTACAGAGACCTCGGCTTCTTTGAAGATATTGGTTTTTGGC
ATCCCTGA

Upstream 100 bases:

>100_bases
GAGATAAGTTACGTCCCCGGAATGGTCAGGATTTGCTAGATTTAGCAGGCCTAGTTCGTAATGCCCCTGTAGATGCTTCG
ACGAATCCCTTGGAGCGTTG

Downstream 100 bases:

>100_bases
AAAAAGATTGCATCATAAAATCCCCCACAAAATTATTACTCTACGAGAATGTCGTGGGGGAAGTGCATTAAGATGCGCTA
TTCAGCTTGGCGTCAGGCTT

Product: PilT domain-containing protein

Products: NA

Alternate protein names: PilT Protein Domain Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MERLVLDAGPLIALVSRQDRYHELAQSGFTQIPKAFGEIITPLPIVFEVYKFVSRRESIQAAQFLLTTLQTNTVIQTISP
TDFQEIYELSIRSPQWRGSLEDASVLVVAKQMQAKVWTIDYRDLGFFEDIGFWHP

Sequences:

>Translated_135_residues
MERLVLDAGPLIALVSRQDRYHELAQSGFTQIPKAFGEIITPLPIVFEVYKFVSRRESIQAAQFLLTTLQTNTVIQTISP
TDFQEIYELSIRSPQWRGSLEDASVLVVAKQMQAKVWTIDYRDLGFFEDIGFWHP
>Mature_135_residues
MERLVLDAGPLIALVSRQDRYHELAQSGFTQIPKAFGEIITPLPIVFEVYKFVSRRESIQAAQFLLTTLQTNTVIQTISP
TDFQEIYELSIRSPQWRGSLEDASVLVVAKQMQAKVWTIDYRDLGFFEDIGFWHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15520; Mature: 15520

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLVLDAGPLIALVSRQDRYHELAQSGFTQIPKAFGEIITPLPIVFEVYKFVSRRESIQ
CCCEECCCCCHHEEHHCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AAQFLLTTLQTNTVIQTISPTDFQEIYELSIRSPQWRGSLEDASVLVVAKQMQAKVWTID
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCEEEEEE
YRDLGFFEDIGFWHP
CCCCCCHHCCCCCCC
>Mature Secondary Structure
MERLVLDAGPLIALVSRQDRYHELAQSGFTQIPKAFGEIITPLPIVFEVYKFVSRRESIQ
CCCEECCCCCHHEEHHCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AAQFLLTTLQTNTVIQTISPTDFQEIYELSIRSPQWRGSLEDASVLVVAKQMQAKVWTID
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCEEEEEE
YRDLGFFEDIGFWHP
CCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA