| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078740
Identifier: 170078740
GI number: 170078740
Start: 2224913
End: 2225458
Strand: Direct
Name: 170078740
Synonym: SYNPCC7002_A2142
Alternate gene names: NA
Gene position: 2224913-2225458 (Clockwise)
Preceding gene: 170078738
Following gene: 170078744
Centisome position: 73.97
GC content: 48.72
Gene sequence:
>546_bases ATGACAGCATCACGAACCCAAGATTATGGTTTTCCTTGGATTTCCTTGGGACTTTTTTGTTTGGCCTATGGGGTGTTTGG TTGGCTGGTGGGGGAAATGATTCCCGCGTGGCAGGCATGGCTCTTAGGGCATCAGACATGGTTTTTCTGGCCTATTGACC AGGCGATCGCCTTTAAGATGGCCTGGGGATTTGGCGGGGGACTTGTGCTGCTTTTGATGGTGGTCTTAGTGGCTCCTCTA CGAATCATGCAATTGTTATTTGGGACTTGGTTGCGCTCCGATGCTAAGGCCTTTACATCGGTCTTAGCCTGGGCCTTTGC GGCGGTCTTGATTATTTGTTGGCTAGAGCAATTTGTCCGCTTTTTTGTGTTGCTTTCAGCGGGGATTTTGTGTCACTTAG ATTTACAGATTCGCGGTTATCGGGTGTGGCAGGTGTTCCTCATTCTCAGTGGGATGGGCCTGGGGAGTTTTGCCTTGGGG GGATATTTATTTTCTCAGTTTCAAATTGAGATTGCCCAATTCTGGTCTATTTTCCAAGCCGCTTAG
Upstream 100 bases:
>100_bases AGGGAGAATTCCTTCCGGCGTTCAGCCACCTTCCCCAGGGAAGGATGGTTGTTGGGTATCCTAGCAAGTAACAGGATTTG TCCGTGGGTAAAGAATAGAG
Downstream 100 bases:
>100_bases ATATTTTCCCTGGGAAGTCAGTTTTGTATTTGCGACCTTTCTCCAGGGAAGAGCTCTCTCTATCCTATGGCATCTCCCCA AGGGGAAATTGGTTTAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTASRTQDYGFPWISLGLFCLAYGVFGWLVGEMIPAWQAWLLGHQTWFFWPIDQAIAFKMAWGFGGGLVLLLMVVLVAPL RIMQLLFGTWLRSDAKAFTSVLAWAFAAVLIICWLEQFVRFFVLLSAGILCHLDLQIRGYRVWQVFLILSGMGLGSFALG GYLFSQFQIEIAQFWSIFQAA
Sequences:
>Translated_181_residues MTASRTQDYGFPWISLGLFCLAYGVFGWLVGEMIPAWQAWLLGHQTWFFWPIDQAIAFKMAWGFGGGLVLLLMVVLVAPL RIMQLLFGTWLRSDAKAFTSVLAWAFAAVLIICWLEQFVRFFVLLSAGILCHLDLQIRGYRVWQVFLILSGMGLGSFALG GYLFSQFQIEIAQFWSIFQAA >Mature_180_residues TASRTQDYGFPWISLGLFCLAYGVFGWLVGEMIPAWQAWLLGHQTWFFWPIDQAIAFKMAWGFGGGLVLLLMVVLVAPLR IMQLLFGTWLRSDAKAFTSVLAWAFAAVLIICWLEQFVRFFVLLSAGILCHLDLQIRGYRVWQVFLILSGMGLGSFALGG YLFSQFQIEIAQFWSIFQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20536; Mature: 20405
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASRTQDYGFPWISLGLFCLAYGVFGWLVGEMIPAWQAWLLGHQTWFFWPIDQAIAFKM CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHH AWGFGGGLVLLLMVVLVAPLRIMQLLFGTWLRSDAKAFTSVLAWAFAAVLIICWLEQFVR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFVLLSAGILCHLDLQIRGYRVWQVFLILSGMGLGSFALGGYLFSQFQIEIAQFWSIFQA HHHHHHCCHHEEEEHEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC A C >Mature Secondary Structure TASRTQDYGFPWISLGLFCLAYGVFGWLVGEMIPAWQAWLLGHQTWFFWPIDQAIAFKM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHH AWGFGGGLVLLLMVVLVAPLRIMQLLFGTWLRSDAKAFTSVLAWAFAAVLIICWLEQFVR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFVLLSAGILCHLDLQIRGYRVWQVFLILSGMGLGSFALGGYLFSQFQIEIAQFWSIFQA HHHHHHCCHHEEEEHEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA