Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078685

Identifier: 170078685

GI number: 170078685

Start: 2162302

End: 2163444

Strand: Reverse

Name: 170078685

Synonym: SYNPCC7002_A2082

Alternate gene names: NA

Gene position: 2163444-2162302 (Counterclockwise)

Preceding gene: 170078686

Following gene: 170078681

Centisome position: 71.92

GC content: 49.08

Gene sequence:

>1143_bases
ATGGCCCAGTCTGTTCCGATCCTCAAACAAATCCAGGTTGCCCTTGCCGCAAAGGACTACAGCCAGATGCGTCAACTGCT
GTTGCAATGGCAAAAAGTAGAGCCAAAAAATCCTTGGTTTCGCTTATATGTAGCGCGGTGGTATGAAGCGACAGAACAAT
GGCAAAAGGCCGAAAAAGGTTATCGGCGGTTACTCAAAGGCGTTACTGTGCCCAAAGTGGTTACCCAAGCACGGCAGGGT
TTGGCACGACTTGAAGCAAGAGCATTAGCTCTGACCCAGACGGCGATCGCCGAAGAAAAGGCTGCCCCCGGCGGAGAAGT
TTATGGTCTGATGGTGTTAGAGCCCATTAGCCCCAAACAAAAGAAAACAGCCGCCCAATATTTCGCGACGGTATTACGCA
CCGATGCCTACTCGGCGGGATTACAGCTGCCCCTGAAATCTTGGCGCTTATTCCGCACAGGTGCCTTGGGAGAACTCCGT
TTTTTAAAGAAAGCCCTCACCCAGGGTAATATTCCCAGTTTTTGTCTCTCTTTGGCCCAGTTACAAAATATTCCGGTGAT
CCAAGTCCAGACCATTGAACAACTCGATCCCCATTTGCTGCTCCGGGGCCTTGATGAAACCCAACAGGCCGTTGAATATA
CAGTGCCTTGGTCAGAAATTTCCCAATGGGTAACGGGCATGTTGCCAATTTTTGAAGAGTCCCTAGAAAAAGACGGTCGC
GGCAAACCCTATTACAAAACAAAAGTCCTTGATTATGCCCAATTCTGCGATTTACATTGGGGCGATCGCCAAGTGATTTT
CCGGCTGAATGACCAGCACTACCAATTCCAGCAGGGATTATCTTTTCTCGAAGTAACCCAAAATCCCATTGAACAGCTCA
GTAACCGCCGCAACTGGAATCAGATGCAACACCGTCTTACTGAGCACCTGAGCCATAGTCGAAAATGGTCAGACTTTAAG
AGTTTCGCAAATAATGCCCGTGACTTTCCGGAACTGCTGCGTAAAATCCAACCTCAGGTGAATCTATTCCGCCAGGAAAC
TCACCAAGATACCTATTGGGATCCGGCCTGGCACCTCTACAGCACAATTATTTTCGCCCATGGTGCCGAAACCCATTCTG
AGGCGATCGCCCAAAAGAACTAA

Upstream 100 bases:

>100_bases
CATTATTTGGGAGAGGGGCAATTATGCCCCTTTTTTTGTGGGGGAGAGTGGCTAGAATGAGGGAAATGTCAGAGGCGATC
GCCTTTTTCTTTGTATTGCT

Downstream 100 bases:

>100_bases
CGATTGATTTTGCTAACTTAAATAACCCTAAAAAGTCGGCACCGTATCAGTGCGCATATTGGGGTTACTGCCAGAACTGG
AGTTGGGGTTGGTTGCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MAQSVPILKQIQVALAAKDYSQMRQLLLQWQKVEPKNPWFRLYVARWYEATEQWQKAEKGYRRLLKGVTVPKVVTQARQG
LARLEARALALTQTAIAEEKAAPGGEVYGLMVLEPISPKQKKTAAQYFATVLRTDAYSAGLQLPLKSWRLFRTGALGELR
FLKKALTQGNIPSFCLSLAQLQNIPVIQVQTIEQLDPHLLLRGLDETQQAVEYTVPWSEISQWVTGMLPIFEESLEKDGR
GKPYYKTKVLDYAQFCDLHWGDRQVIFRLNDQHYQFQQGLSFLEVTQNPIEQLSNRRNWNQMQHRLTEHLSHSRKWSDFK
SFANNARDFPELLRKIQPQVNLFRQETHQDTYWDPAWHLYSTIIFAHGAETHSEAIAQKN

Sequences:

>Translated_380_residues
MAQSVPILKQIQVALAAKDYSQMRQLLLQWQKVEPKNPWFRLYVARWYEATEQWQKAEKGYRRLLKGVTVPKVVTQARQG
LARLEARALALTQTAIAEEKAAPGGEVYGLMVLEPISPKQKKTAAQYFATVLRTDAYSAGLQLPLKSWRLFRTGALGELR
FLKKALTQGNIPSFCLSLAQLQNIPVIQVQTIEQLDPHLLLRGLDETQQAVEYTVPWSEISQWVTGMLPIFEESLEKDGR
GKPYYKTKVLDYAQFCDLHWGDRQVIFRLNDQHYQFQQGLSFLEVTQNPIEQLSNRRNWNQMQHRLTEHLSHSRKWSDFK
SFANNARDFPELLRKIQPQVNLFRQETHQDTYWDPAWHLYSTIIFAHGAETHSEAIAQKN
>Mature_379_residues
AQSVPILKQIQVALAAKDYSQMRQLLLQWQKVEPKNPWFRLYVARWYEATEQWQKAEKGYRRLLKGVTVPKVVTQARQGL
ARLEARALALTQTAIAEEKAAPGGEVYGLMVLEPISPKQKKTAAQYFATVLRTDAYSAGLQLPLKSWRLFRTGALGELRF
LKKALTQGNIPSFCLSLAQLQNIPVIQVQTIEQLDPHLLLRGLDETQQAVEYTVPWSEISQWVTGMLPIFEESLEKDGRG
KPYYKTKVLDYAQFCDLHWGDRQVIFRLNDQHYQFQQGLSFLEVTQNPIEQLSNRRNWNQMQHRLTEHLSHSRKWSDFKS
FANNARDFPELLRKIQPQVNLFRQETHQDTYWDPAWHLYSTIIFAHGAETHSEAIAQKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44120; Mature: 43989

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSVPILKQIQVALAAKDYSQMRQLLLQWQKVEPKNPWFRLYVARWYEATEQWQKAEKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YRRLLKGVTVPKVVTQARQGLARLEARALALTQTAIAEEKAAPGGEVYGLMVLEPISPKQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH
KKTAAQYFATVLRTDAYSAGLQLPLKSWRLFRTGALGELRFLKKALTQGNIPSFCLSLAQ
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH
LQNIPVIQVQTIEQLDPHLLLRGLDETQQAVEYTVPWSEISQWVTGMLPIFEESLEKDGR
HCCCCEEEEHHHHHCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
GKPYYKTKVLDYAQFCDLHWGDRQVIFRLNDQHYQFQQGLSFLEVTQNPIEQLSNRRNWN
CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHCCCCHH
QMQHRLTEHLSHSRKWSDFKSFANNARDFPELLRKIQPQVNLFRQETHQDTYWDPAWHLY
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHH
STIIFAHGAETHSEAIAQKN
HHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
AQSVPILKQIQVALAAKDYSQMRQLLLQWQKVEPKNPWFRLYVARWYEATEQWQKAEKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YRRLLKGVTVPKVVTQARQGLARLEARALALTQTAIAEEKAAPGGEVYGLMVLEPISPKQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH
KKTAAQYFATVLRTDAYSAGLQLPLKSWRLFRTGALGELRFLKKALTQGNIPSFCLSLAQ
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH
LQNIPVIQVQTIEQLDPHLLLRGLDETQQAVEYTVPWSEISQWVTGMLPIFEESLEKDGR
HCCCCEEEEHHHHHCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
GKPYYKTKVLDYAQFCDLHWGDRQVIFRLNDQHYQFQQGLSFLEVTQNPIEQLSNRRNWN
CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHCCCCHH
QMQHRLTEHLSHSRKWSDFKSFANNARDFPELLRKIQPQVNLFRQETHQDTYWDPAWHLY
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHH
STIIFAHGAETHSEAIAQKN
HHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA