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The map label for this gene is aglF [H]

Identifier: 170078641

GI number: 170078641

Start: 2117646

End: 2118623

Strand: Reverse

Name: aglF [H]

Synonym: SYNPCC7002_A2037

Alternate gene names: 170078641

Gene position: 2118623-2117646 (Counterclockwise)

Preceding gene: 170078642

Following gene: 170078640

Centisome position: 70.43

GC content: 41.82

Gene sequence:

>978_bases
ATGGAATTCTGGACGCGTCTACTGAACGTGGTCTTGGCGATCGCCATTGGTTGTGGCGGTGTGATTGGGCTGTTTTATTT
AGCGAATATTGCGATTAATGCCCTGCCGAAACCCTGGAATCAGCGACTATTGCCGTGGGTTTATATTTCTCCGGCATTAT
TATTGCTTTCTGCCTATTTGATTTTGCCGACGATGCAAACGTTTTATTTGAGTTTTCTAGATGGGCGATCGCAAAATTTT
GTCGGACTCAAAAACTATATTTTTGCCTTCACTGACCGGGCAATGTTAATTGCGTTTAAAAATAATTTGCTTTGGCTTGT
TTTGGTTACAGGTGTCAGCGTCAGTTTGGGATTAATTATTGCCGTACTAGTTGACAAAGTGCGCTATGAACCAATTATTA
AATCCTTAATTTTCTTGCCGATGGCAATCTCCTTTGTGGGGGCGAGTGTCATCTGGAAATTTATGTACGCCTACAAACCG
GCTGGGGATGATCAAATTGGTGTTTTAAATGCGCTGTTGGTGAATTTTGGCTTTGAACCCGTGGGCTGGATTGTCGAACA
ATCGGTGAATAATTTTGCTTTGATTGCAATTATGATCTGGCTTTACACCGGTTTTGCGATGGTAATTTTATCGTCAGCGG
TCAAAGGTATTCCAGAAGAAGTGATCGAAGCGGCGCGGATTGATGGGGCGAATAGTTGGCAAATTTTTTGGCGAATTACG
ATCCCAATGATCCGTTCCACGATTCTCGTTGTCAGTACCACGATTATTATTTTGGTCTTGAAAGTATTTGATATCGTCTT
TGTGATGACAGGGGGCAATTATGGTACGGAAGTGATCGCCAGTCGCATGATTAAAGAGATGTTTAATTATCGAAATTTTG
GGCGTGGTAGTGCGATCGCCATCGTGCTTTTAATCTTAATTATTCCGGTAATGATCAGTAATATTCGACGGTTTAGAACA
CAGGAGAAATTACGCTAA

Upstream 100 bases:

>100_bases
TGGCCTGAGTAACATCCCCCTAAATCCCCCTTCAAAGGGGGACTTCGATTCCCCTGAATCCTTCTTTAACCGAGACTGTA
AGTATTTCATGGAGGTCATG

Downstream 100 bases:

>100_bases
TGGCACAGCAAAAGCAAACTCAATTTTGGCAAAAAACACCGATTCATATTTCGTTATTGGTGATCGCTTTTATCTGGACA
TTGCCGTCGGTGGGGTTACT

Product: ABC transporter, permease subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MEFWTRLLNVVLAIAIGCGGVIGLFYLANIAINALPKPWNQRLLPWVYISPALLLLSAYLILPTMQTFYLSFLDGRSQNF
VGLKNYIFAFTDRAMLIAFKNNLLWLVLVTGVSVSLGLIIAVLVDKVRYEPIIKSLIFLPMAISFVGASVIWKFMYAYKP
AGDDQIGVLNALLVNFGFEPVGWIVEQSVNNFALIAIMIWLYTGFAMVILSSAVKGIPEEVIEAARIDGANSWQIFWRIT
IPMIRSTILVVSTTIIILVLKVFDIVFVMTGGNYGTEVIASRMIKEMFNYRNFGRGSAIAIVLLILIIPVMISNIRRFRT
QEKLR

Sequences:

>Translated_325_residues
MEFWTRLLNVVLAIAIGCGGVIGLFYLANIAINALPKPWNQRLLPWVYISPALLLLSAYLILPTMQTFYLSFLDGRSQNF
VGLKNYIFAFTDRAMLIAFKNNLLWLVLVTGVSVSLGLIIAVLVDKVRYEPIIKSLIFLPMAISFVGASVIWKFMYAYKP
AGDDQIGVLNALLVNFGFEPVGWIVEQSVNNFALIAIMIWLYTGFAMVILSSAVKGIPEEVIEAARIDGANSWQIFWRIT
IPMIRSTILVVSTTIIILVLKVFDIVFVMTGGNYGTEVIASRMIKEMFNYRNFGRGSAIAIVLLILIIPVMISNIRRFRT
QEKLR
>Mature_325_residues
MEFWTRLLNVVLAIAIGCGGVIGLFYLANIAINALPKPWNQRLLPWVYISPALLLLSAYLILPTMQTFYLSFLDGRSQNF
VGLKNYIFAFTDRAMLIAFKNNLLWLVLVTGVSVSLGLIIAVLVDKVRYEPIIKSLIFLPMAISFVGASVIWKFMYAYKP
AGDDQIGVLNALLVNFGFEPVGWIVEQSVNNFALIAIMIWLYTGFAMVILSSAVKGIPEEVIEAARIDGANSWQIFWRIT
IPMIRSTILVVSTTIIILVLKVFDIVFVMTGGNYGTEVIASRMIKEMFNYRNFGRGSAIAIVLLILIIPVMISNIRRFRT
QEKLR

Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=299, Percent_Identity=24.7491638795987, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787570, Length=245, Percent_Identity=25.3061224489796, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790465, Length=261, Percent_Identity=24.1379310344828, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36502; Mature: 36502

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFWTRLLNVVLAIAIGCGGVIGLFYLANIAINALPKPWNQRLLPWVYISPALLLLSAYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
ILPTMQTFYLSFLDGRSQNFVGLKNYIFAFTDRAMLIAFKNNLLWLVLVTGVSVSLGLII
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEEEEHHHHHHHHHHHH
AVLVDKVRYEPIIKSLIFLPMAISFVGASVIWKFMYAYKPAGDDQIGVLNALLVNFGFEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH
VGWIVEQSVNNFALIAIMIWLYTGFAMVILSSAVKGIPEEVIEAARIDGANSWQIFWRIT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEE
IPMIRSTILVVSTTIIILVLKVFDIVFVMTGGNYGTEVIASRMIKEMFNYRNFGRGSAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
IVLLILIIPVMISNIRRFRTQEKLR
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFWTRLLNVVLAIAIGCGGVIGLFYLANIAINALPKPWNQRLLPWVYISPALLLLSAYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
ILPTMQTFYLSFLDGRSQNFVGLKNYIFAFTDRAMLIAFKNNLLWLVLVTGVSVSLGLII
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEEEEHHHHHHHHHHHH
AVLVDKVRYEPIIKSLIFLPMAISFVGASVIWKFMYAYKPAGDDQIGVLNALLVNFGFEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH
VGWIVEQSVNNFALIAIMIWLYTGFAMVILSSAVKGIPEEVIEAARIDGANSWQIFWRIT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEE
IPMIRSTILVVSTTIIILVLKVFDIVFVMTGGNYGTEVIASRMIKEMFNYRNFGRGSAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
IVLLILIIPVMISNIRRFRTQEKLR
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]