| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is aglG [H]
Identifier: 170078640
GI number: 170078640
Start: 2116783
End: 2117646
Strand: Reverse
Name: aglG [H]
Synonym: SYNPCC7002_A2036
Alternate gene names: 170078640
Gene position: 2117646-2116783 (Counterclockwise)
Preceding gene: 170078641
Following gene: 170078636
Centisome position: 70.4
GC content: 49.77
Gene sequence:
>864_bases ATGGCACAGCAAAAGCAAACTCAATTTTGGCAAAAAACACCGATTCATATTTCGTTATTGGTGATCGCTTTTATCTGGAC ATTGCCGTCGGTGGGGTTACTCATTAGCTCTTTTCGGCGACGGGATGCAATGCTGGAAACGGGCTGGTGGACTATTTTTC AACATCCCTTTGAACTAACCCAATATCACATTGGAAATTATGTGGATGTGCTCCAAGCGGAGGGCATGGGACAGGCCTTT TTTAATAGCTTGACAATCGCCATTCCCGCGACGGTGATCCCGATTGCGATCGCCTGTTTTGCTGCCTATGCCTTTGCCTG GATGAAATTTCCGGGGCGACAATTTTTATTTATCGTGGTGGTTTGTTTGCTGGTTGTCCCGCTACAAACGACCCTGATTC CGATTCTGCGGGCCTATCGAGATTTTGGTCTGTCCAATAGTTTCCTGGGGGTATGGCTTGCCCATGCGGGGTATGGTCTG CCCCTGGGGATTTACCTCCTGCGGAACTACATTGGCGAATTACCCAAGGATTTAATCGAAGCGGCGGCGGTGGATGGCGC ATCCCACTTGAAGATTTTTACAAAATTAATCGTCCCCCTCTCGATGCCGGCGATCGCCTCCTTTGCGGTCTTCCAGTTTC TGTGGGTGTGGAATGATTTGCTCATCGCCCTAGTTTATTTAGGCACCACAAATGACGTTGCCCCCGTCACGATCCAACTG AGTAATTTAGTCGGGTCACGGGGCCAAGACTGGCACCTGCTTACTGCCGGAGCCTTTATCTCGATGATCGTTCCCCTCGG CGTTTTCTTCAGCCTACAACGCTATTTCGTACGGGGAATTTTAGCGGGTTCAGTGAAATCCTAG
Upstream 100 bases:
>100_bases TTGGGCGTGGTAGTGCGATCGCCATCGTGCTTTTAATCTTAATTATTCCGGTAATGATCAGTAATATTCGACGGTTTAGA ACACAGGAGAAATTACGCTA
Downstream 100 bases:
>100_bases TCCTTTGTCCACACGGGATGTTGGAACAGCGCGAGGATCGTTTTTGCGCCCCGTAACTGGTTAGAGGTGGGCAGATGTCC CCTGGGTGCATCCAGATTCC
Product: ABC transporter, ATPase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAQQKQTQFWQKTPIHISLLVIAFIWTLPSVGLLISSFRRRDAMLETGWWTIFQHPFELTQYHIGNYVDVLQAEGMGQAF FNSLTIAIPATVIPIAIACFAAYAFAWMKFPGRQFLFIVVVCLLVVPLQTTLIPILRAYRDFGLSNSFLGVWLAHAGYGL PLGIYLLRNYIGELPKDLIEAAAVDGASHLKIFTKLIVPLSMPAIASFAVFQFLWVWNDLLIALVYLGTTNDVAPVTIQL SNLVGSRGQDWHLLTAGAFISMIVPLGVFFSLQRYFVRGILAGSVKS
Sequences:
>Translated_287_residues MAQQKQTQFWQKTPIHISLLVIAFIWTLPSVGLLISSFRRRDAMLETGWWTIFQHPFELTQYHIGNYVDVLQAEGMGQAF FNSLTIAIPATVIPIAIACFAAYAFAWMKFPGRQFLFIVVVCLLVVPLQTTLIPILRAYRDFGLSNSFLGVWLAHAGYGL PLGIYLLRNYIGELPKDLIEAAAVDGASHLKIFTKLIVPLSMPAIASFAVFQFLWVWNDLLIALVYLGTTNDVAPVTIQL SNLVGSRGQDWHLLTAGAFISMIVPLGVFFSLQRYFVRGILAGSVKS >Mature_286_residues AQQKQTQFWQKTPIHISLLVIAFIWTLPSVGLLISSFRRRDAMLETGWWTIFQHPFELTQYHIGNYVDVLQAEGMGQAFF NSLTIAIPATVIPIAIACFAAYAFAWMKFPGRQFLFIVVVCLLVVPLQTTLIPILRAYRDFGLSNSFLGVWLAHAGYGLP LGIYLLRNYIGELPKDLIEAAAVDGASHLKIFTKLIVPLSMPAIASFAVFQFLWVWNDLLIALVYLGTTNDVAPVTIQLS NLVGSRGQDWHLLTAGAFISMIVPLGVFFSLQRYFVRGILAGSVKS
Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789860, Length=214, Percent_Identity=28.5046728971963, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787571, Length=290, Percent_Identity=23.448275862069, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1790464, Length=211, Percent_Identity=27.9620853080569, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31999; Mature: 31868
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQKQTQFWQKTPIHISLLVIAFIWTLPSVGLLISSFRRRDAMLETGWWTIFQHPFELT CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHH QYHIGNYVDVLQAEGMGQAFFNSLTIAIPATVIPIAIACFAAYAFAWMKFPGRQFLFIVV HHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VCLLVVPLQTTLIPILRAYRDFGLSNSFLGVWLAHAGYGLPLGIYLLRNYIGELPKDLIE HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AAAVDGASHLKIFTKLIVPLSMPAIASFAVFQFLWVWNDLLIALVYLGTTNDVAPVTIQL HHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE SNLVGSRGQDWHLLTAGAFISMIVPLGVFFSLQRYFVRGILAGSVKS HHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQQKQTQFWQKTPIHISLLVIAFIWTLPSVGLLISSFRRRDAMLETGWWTIFQHPFELT CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHH QYHIGNYVDVLQAEGMGQAFFNSLTIAIPATVIPIAIACFAAYAFAWMKFPGRQFLFIVV HHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VCLLVVPLQTTLIPILRAYRDFGLSNSFLGVWLAHAGYGLPLGIYLLRNYIGELPKDLIE HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AAAVDGASHLKIFTKLIVPLSMPAIASFAVFQFLWVWNDLLIALVYLGTTNDVAPVTIQL HHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE SNLVGSRGQDWHLLTAGAFISMIVPLGVFFSLQRYFVRGILAGSVKS HHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]