Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078639

Identifier: 170078639

GI number: 170078639

Start: 2116097

End: 2116786

Strand: Direct

Name: 170078639

Synonym: SYNPCC7002_A2035

Alternate gene names: NA

Gene position: 2116097-2116786 (Clockwise)

Preceding gene: 170078638

Following gene: 170078645

Centisome position: 70.35

GC content: 48.84

Gene sequence:

>690_bases
ATGGAGGCAACCAGCGATTTACTGCAAGAATTTTCGGCATTATCGGCGAAAAAGCAGCTAGAACAAATCCCCCAACTGAT
TGACCAAGGGGATGCTGGTTTTGCTTGCTTGAGAGAATTTTTGATGGCGCAACAGGGCCAGGCGGCAACCCCTGTCATGG
GGAAAATTTGCCAAGTGCTCACCCAGAATCAAACCGCCGAAAATTTACTGTTCATGCAGCAGGAATTTCCGGAGGGGGTC
GTTGAACTCAAGTCAGCGCGAGAGATTGATTACCAGATTATTCAAGACAAATTGATCGAAGAGGAGTTTCTGGAAGCAGA
TATTTTAACCCTCCAGAAAATGTGTGAACTGGCAGGGGAATCTGCTATGAAACGAAAATGGCTCTACTTTACGGAGGTAG
AGCGGTTTCCCGACGAGGATCTGCTCACCCTCGATCAGTTGTGGCAGGTTTATTCCGGCGGGAAATTTGGCTTTTCGGTA
CAGCGTAAATTATGGAATTCCCTCGGTAAAGACTTCAATGCCCTCTGGGAAAAAATTGCTTGGCGGGATGGGAGAACCTG
GGCGCGTTATCCCAAAGCATTTATTTGGAATCTGGATGCACCCAGGGGACATCTGCCCACCTCTAACCAGTTACGGGGCG
CAAAAACGATCCTCGCGCTGTTCCAACATCCCGTGTGGACAAAGGACTAG

Upstream 100 bases:

>100_bases
ATCGCTCTGCTTGACTCAATAGTAGATTTTGACGGCGATCGCCCACGCACTACATCCATCACAATTTTTTGACGCAACAC
ATTGGGGAGACACAGTTTAC

Downstream 100 bases:

>100_bases
GATTTCACTGAACCCGCTAAAATTCCCCGTACGAAATAGCGTTGTAGGCTGAAGAAAACGCCGAGGGGAACGATCATCGA
GATAAAGGCTCCGGCAGTAA

Product: GUN4-like protein; putative Mg-protoporphyrin IX binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MEATSDLLQEFSALSAKKQLEQIPQLIDQGDAGFACLREFLMAQQGQAATPVMGKICQVLTQNQTAENLLFMQQEFPEGV
VELKSAREIDYQIIQDKLIEEEFLEADILTLQKMCELAGESAMKRKWLYFTEVERFPDEDLLTLDQLWQVYSGGKFGFSV
QRKLWNSLGKDFNALWEKIAWRDGRTWARYPKAFIWNLDAPRGHLPTSNQLRGAKTILALFQHPVWTKD

Sequences:

>Translated_229_residues
MEATSDLLQEFSALSAKKQLEQIPQLIDQGDAGFACLREFLMAQQGQAATPVMGKICQVLTQNQTAENLLFMQQEFPEGV
VELKSAREIDYQIIQDKLIEEEFLEADILTLQKMCELAGESAMKRKWLYFTEVERFPDEDLLTLDQLWQVYSGGKFGFSV
QRKLWNSLGKDFNALWEKIAWRDGRTWARYPKAFIWNLDAPRGHLPTSNQLRGAKTILALFQHPVWTKD
>Mature_229_residues
MEATSDLLQEFSALSAKKQLEQIPQLIDQGDAGFACLREFLMAQQGQAATPVMGKICQVLTQNQTAENLLFMQQEFPEGV
VELKSAREIDYQIIQDKLIEEEFLEADILTLQKMCELAGESAMKRKWLYFTEVERFPDEDLLTLDQLWQVYSGGKFGFSV
QRKLWNSLGKDFNALWEKIAWRDGRTWARYPKAFIWNLDAPRGHLPTSNQLRGAKTILALFQHPVWTKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016024
- InterPro:   IPR008629 [H]

Pfam domain/function: PF05419 GUN4 [H]

EC number: NA

Molecular weight: Translated: 26410; Mature: 26410

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATSDLLQEFSALSAKKQLEQIPQLIDQGDAGFACLREFLMAQQGQAATPVMGKICQVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
TQNQTAENLLFMQQEFPEGVVELKSAREIDYQIIQDKLIEEEFLEADILTLQKMCELAGE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAMKRKWLYFTEVERFPDEDLLTLDQLWQVYSGGKFGFSVQRKLWNSLGKDFNALWEKIA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHH
WRDGRTWARYPKAFIWNLDAPRGHLPTSNQLRGAKTILALFQHPVWTKD
HCCCCCHHHCCHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEATSDLLQEFSALSAKKQLEQIPQLIDQGDAGFACLREFLMAQQGQAATPVMGKICQVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
TQNQTAENLLFMQQEFPEGVVELKSAREIDYQIIQDKLIEEEFLEADILTLQKMCELAGE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAMKRKWLYFTEVERFPDEDLLTLDQLWQVYSGGKFGFSVQRKLWNSLGKDFNALWEKIA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHH
WRDGRTWARYPKAFIWNLDAPRGHLPTSNQLRGAKTILALFQHPVWTKD
HCCCCCHHHCCHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]