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The map label for this gene is ytfH [C]

Identifier: 170078597

GI number: 170078597

Start: 2074905

End: 2075288

Strand: Direct

Name: ytfH [C]

Synonym: SYNPCC7002_A1993

Alternate gene names: 170078597

Gene position: 2074905-2075288 (Clockwise)

Preceding gene: 170078592

Following gene: 170078601

Centisome position: 68.98

GC content: 50.52

Gene sequence:

>384_bases
ATGACTGACCCCAACCCTTGTAATGATGTTAATTTCCAATGTCCGATCCAATTTGTGGTGGATTTGTTGGGAAATAAATG
GTCAATTTTAGTGTTGCGGGAGCTGTTTACAGGCGATCGCCGCACCAATGAACTGCTCAAGGCTTTACCGGGGATCAGTA
CCAAAACGTTAATGGTGCGCCTGCGAGAACTAGAAGCCCATGGCCTGGTGGAACGGCGCATTTACGCAGAGATCCCCCCC
CGGGTGGAATATTCGTTAACAGCAAAGGGACGGGAAATTCAGCCGGTGATGACCGCCCTCCATCAAGTCGGCTCCCAATG
GTTGGAACAGGAGACTTGCGTTTGTCCTTTGCAGGGGGAAATAGATTCGGTGCAATCGGCTTAA

Upstream 100 bases:

>100_bases
CTAGCCTATAGTTACCTGGGGTAAAAAAATGTTGCCTTTGTTAGGATTCCAGGGACATTGAAGAAATGTTAAAGTTTTAG
CAATGAAGTATGTTTGGCCA

Downstream 100 bases:

>100_bases
TTTTTTAGGACAATTCAAAGAGTTCAGCCACGGTCACAAAGCGATAGCCGGCTTCGGTCAACTGACTCAAAATCAAATCT
GTCGCTTCTACGGTGCGTTG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTDPNPCNDVNFQCPIQFVVDLLGNKWSILVLRELFTGDRRTNELLKALPGISTKTLMVRLRELEAHGLVERRIYAEIPP
RVEYSLTAKGREIQPVMTALHQVGSQWLEQETCVCPLQGEIDSVQSA

Sequences:

>Translated_127_residues
MTDPNPCNDVNFQCPIQFVVDLLGNKWSILVLRELFTGDRRTNELLKALPGISTKTLMVRLRELEAHGLVERRIYAEIPP
RVEYSLTAKGREIQPVMTALHQVGSQWLEQETCVCPLQGEIDSVQSA
>Mature_126_residues
TDPNPCNDVNFQCPIQFVVDLLGNKWSILVLRELFTGDRRTNELLKALPGISTKTLMVRLRELEAHGLVERRIYAEIPPR
VEYSLTAKGREIQPVMTALHQVGSQWLEQETCVCPLQGEIDSVQSA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=97, Percent_Identity=35.0515463917526, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14376; Mature: 14245

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPNPCNDVNFQCPIQFVVDLLGNKWSILVLRELFTGDRRTNELLKALPGISTKTLMVR
CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH
LRELEAHGLVERRIYAEIPPRVEYSLTAKGREIQPVMTALHQVGSQWLEQETCVCPLQGE
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
IDSVQSA
CCCCCCC
>Mature Secondary Structure 
TDPNPCNDVNFQCPIQFVVDLLGNKWSILVLRELFTGDRRTNELLKALPGISTKTLMVR
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH
LRELEAHGLVERRIYAEIPPRVEYSLTAKGREIQPVMTALHQVGSQWLEQETCVCPLQGE
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
IDSVQSA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]