| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078585
Identifier: 170078585
GI number: 170078585
Start: 2066036
End: 2066539
Strand: Direct
Name: 170078585
Synonym: SYNPCC7002_A1981
Alternate gene names: NA
Gene position: 2066036-2066539 (Clockwise)
Preceding gene: 170078580
Following gene: 170078586
Centisome position: 68.68
GC content: 49.6
Gene sequence:
>504_bases TTGAGTCAATCTTTAGATATTCCGACCCTTGACACCCTGGCACAGGAGCTAGCTGCCATTCAACAAACTGGCTCTAAGCG CATTGCTCTTCTCGGTTCTCGGCATGTCCCGATTACCCACCAGCACCTGATCGAAATGATGAGCTATGCCCTAGCCCTAG GGGGAAATCGAATTATCACCTCCGGCGCAACGGGGACAAATTCAGCGGCGATTAAGGGTGTAATGCGGGCTGATTCGAGC CTTTTAACTGTAATTCTGCCCCAGAGCCTCGAAAAACAACCCCGTGAATCCCGTGTGGAACTCGAAAAGGTCGTGCATCT GGTAGAGCATCCTGAGAATGATGAACTTTCTCTGGGAGAAGCCAGCAGCCTGTGTAATAGTGAAATTATCTCCCGCTGCC AACAGCTCATTTGTTTTGCGTTCCATGACAGTGACACCCTCCTGCAAACCTGCCAAGAAGCAGAAGAACAGCGAAAACTT GTCACCCTCTTCTATTTCGATTAA
Upstream 100 bases:
>100_bases TGCAAGCATCTCGGCAAAGAAAAACAGAAGGATTGCTTTATCAGGGATGTTTGATTAAAATAGCATCGATTATTCAGGCT ATCGAGTCCCCTTACGATCT
Downstream 100 bases:
>100_bases TTTTTTTGTGCTACCCATTTGCCCAGTTGTTTAGGATTAATCCATGAATCTGTCTGTTTCTGCTGTCCTTATCTATTCGT TGATCGGCGCGGTATTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSQSLDIPTLDTLAQELAAIQQTGSKRIALLGSRHVPITHQHLIEMMSYALALGGNRIITSGATGTNSAAIKGVMRADSS LLTVILPQSLEKQPRESRVELEKVVHLVEHPENDELSLGEASSLCNSEIISRCQQLICFAFHDSDTLLQTCQEAEEQRKL VTLFYFD
Sequences:
>Translated_167_residues MSQSLDIPTLDTLAQELAAIQQTGSKRIALLGSRHVPITHQHLIEMMSYALALGGNRIITSGATGTNSAAIKGVMRADSS LLTVILPQSLEKQPRESRVELEKVVHLVEHPENDELSLGEASSLCNSEIISRCQQLICFAFHDSDTLLQTCQEAEEQRKL VTLFYFD >Mature_166_residues SQSLDIPTLDTLAQELAAIQQTGSKRIALLGSRHVPITHQHLIEMMSYALALGGNRIITSGATGTNSAAIKGVMRADSSL LTVILPQSLEKQPRESRVELEKVVHLVEHPENDELSLGEASSLCNSEIISRCQQLICFAFHDSDTLLQTCQEAEEQRKLV TLFYFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18403; Mature: 18272
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLDIPTLDTLAQELAAIQQTGSKRIALLGSRHVPITHQHLIEMMSYALALGGNRIIT CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEE SGATGTNSAAIKGVMRADSSLLTVILPQSLEKQPRESRVELEKVVHLVEHPENDELSLGE CCCCCCCHHHHHHHHHCCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCH ASSLCNSEIISRCQQLICFAFHDSDTLLQTCQEAEEQRKLVTLFYFD HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEEEEC >Mature Secondary Structure SQSLDIPTLDTLAQELAAIQQTGSKRIALLGSRHVPITHQHLIEMMSYALALGGNRIIT CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEE SGATGTNSAAIKGVMRADSSLLTVILPQSLEKQPRESRVELEKVVHLVEHPENDELSLGE CCCCCCCHHHHHHHHHCCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCH ASSLCNSEIISRCQQLICFAFHDSDTLLQTCQEAEEQRKLVTLFYFD HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA