Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078557

Identifier: 170078557

GI number: 170078557

Start: 2031591

End: 2032772

Strand: Direct

Name: 170078557

Synonym: SYNPCC7002_A1952

Alternate gene names: NA

Gene position: 2031591-2032772 (Clockwise)

Preceding gene: 170078556

Following gene: 170078560

Centisome position: 67.54

GC content: 51.52

Gene sequence:

>1182_bases
ATGATGAAGCCGAAAAATTCCTGGTGGCGATCGCCAAAAATTTTATGGATTAAACTTTGTCTGATTGGCAGCTTACTGAT
CGGTTGTGCCCCCGTTGTGCCCCCGGCAGAAAGCAATCCCCGCACCTTTGCCCCCCTGAGCGTAGAATTTCTAGACGAAT
ATTGGTTACCCAAAACAGAGTTTCAAGGGACAACGGTCGGCGGCCTATCGGCTCTCTATTACGATGCCCAGACCGGTGAT
TATTATGCCCTGAGTGACGACCGTTCCCAGTTTGCCCCGGCCCGCTTTTATACCTTCGATCTGGACATCGACGAAACCGG
AGCCATTCCCCAAATCCAGCAGCTCAACCTCAAGGGCATGACGCCTTTAACCACCCCTGACGGTGAAACCTTTGCCCCAG
GAAGCCTTGACCCAGAAGGATTGGTGCTCTCGCCCCGCAATACGTTATTTATTTCCAGCGAGGGAGATACCGACGCCGCC
ATTGACCCGTTTGTAAAAGAATTTGATCACGAAGGTCGTGAATTAACGTCCCTCAGAATTCCCCAACGTTTTCTAACAGG
CGATCGCCAGCGGGGTGTGCGCAATAATTTAGGATTTGAATCCTTGGCCATTTCTGCCCCTTCCCAAGCCGCCGTTGACC
CCTTTCGGATCTTTGTCGCTCCAGAATCATCTCTTCATCAAGACACGCGTTCTGATAATGTGGGTGCGCCCATCCGTCTA
CTGCATTACGTCATCAATCCCATCGGCGAGCCTGTGTTAATCGCCGAGCATCTCTATCCTTTAGAACCTGCACCCCAAGG
AACCTTTTCCAATGGCCTCGTGGAAATGATTGCCCTCCCCCAGGAAGGTTATTTTCTCAGCCTGGAGCGCAGCTATGGCC
TTGGGGGGGTTGGTGCGAAACTGTTCCAGGTGACCATTGGTAATGCCACCGACACTGCCCGCATCGAATCCCTCGCCGGA
AATCCAGAGACCGTTGTCCCCATGCAGAAAACCCTATTGCTGGATCTGCGACAGTTGGGGATTGGCCTCGATAACCTAGA
AGGTATGACCCTAGGGCCACGGCTTGCCGATGGCAGCCAAAGTTTACTGTTGATCAGCGATGATAATTTCAGTACCGATC
AGGTAAATCAACTTTTGCTTTTTCGCTTGAGTAATTCGGCGGCTAAAGTCACATCAAAATAA

Upstream 100 bases:

>100_bases
ATCTAAAACCAGCCATTACCAGGCAAATTTTGATAATCTGCTAGTTTAAGGGAGGAAAATCACCTCTCTTTTTTGTTGTG
TTGTGGGAAAGCCAAAAGCC

Downstream 100 bases:

>100_bases
GGCCAAGTCCCCACCTCTCCGGCTAGCACCGTAAAGGGTTGATCGGGTTCCCCCAGGTCACTGAGTACCAGGTCGGCCCC
CGTAAAATCTTGGTTAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MMKPKNSWWRSPKILWIKLCLIGSLLIGCAPVVPPAESNPRTFAPLSVEFLDEYWLPKTEFQGTTVGGLSALYYDAQTGD
YYALSDDRSQFAPARFYTFDLDIDETGAIPQIQQLNLKGMTPLTTPDGETFAPGSLDPEGLVLSPRNTLFISSEGDTDAA
IDPFVKEFDHEGRELTSLRIPQRFLTGDRQRGVRNNLGFESLAISAPSQAAVDPFRIFVAPESSLHQDTRSDNVGAPIRL
LHYVINPIGEPVLIAEHLYPLEPAPQGTFSNGLVEMIALPQEGYFLSLERSYGLGGVGAKLFQVTIGNATDTARIESLAG
NPETVVPMQKTLLLDLRQLGIGLDNLEGMTLGPRLADGSQSLLLISDDNFSTDQVNQLLLFRLSNSAAKVTSK

Sequences:

>Translated_393_residues
MMKPKNSWWRSPKILWIKLCLIGSLLIGCAPVVPPAESNPRTFAPLSVEFLDEYWLPKTEFQGTTVGGLSALYYDAQTGD
YYALSDDRSQFAPARFYTFDLDIDETGAIPQIQQLNLKGMTPLTTPDGETFAPGSLDPEGLVLSPRNTLFISSEGDTDAA
IDPFVKEFDHEGRELTSLRIPQRFLTGDRQRGVRNNLGFESLAISAPSQAAVDPFRIFVAPESSLHQDTRSDNVGAPIRL
LHYVINPIGEPVLIAEHLYPLEPAPQGTFSNGLVEMIALPQEGYFLSLERSYGLGGVGAKLFQVTIGNATDTARIESLAG
NPETVVPMQKTLLLDLRQLGIGLDNLEGMTLGPRLADGSQSLLLISDDNFSTDQVNQLLLFRLSNSAAKVTSK
>Mature_393_residues
MMKPKNSWWRSPKILWIKLCLIGSLLIGCAPVVPPAESNPRTFAPLSVEFLDEYWLPKTEFQGTTVGGLSALYYDAQTGD
YYALSDDRSQFAPARFYTFDLDIDETGAIPQIQQLNLKGMTPLTTPDGETFAPGSLDPEGLVLSPRNTLFISSEGDTDAA
IDPFVKEFDHEGRELTSLRIPQRFLTGDRQRGVRNNLGFESLAISAPSQAAVDPFRIFVAPESSLHQDTRSDNVGAPIRL
LHYVINPIGEPVLIAEHLYPLEPAPQGTFSNGLVEMIALPQEGYFLSLERSYGLGGVGAKLFQVTIGNATDTARIESLAG
NPETVVPMQKTLLLDLRQLGIGLDNLEGMTLGPRLADGSQSLLLISDDNFSTDQVNQLLLFRLSNSAAKVTSK

Specific function: Unknown

COG id: COG4222

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42973; Mature: 42973

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKPKNSWWRSPKILWIKLCLIGSLLIGCAPVVPPAESNPRTFAPLSVEFLDEYWLPKTE
CCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCEECCEEHHHHHHHCCCCCC
FQGTTVGGLSALYYDAQTGDYYALSDDRSQFAPARFYTFDLDIDETGAIPQIQQLNLKGM
CCCCCCCCCEEEEEECCCCCEEEECCCCHHCCCEEEEEEEECCCCCCCCCCCEECCCCCC
TPLTTPDGETFAPGSLDPEGLVLSPRNTLFISSEGDTDAAIDPFVKEFDHEGRELTSLRI
CCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEC
PQRFLTGDRQRGVRNNLGFESLAISAPSQAAVDPFRIFVAPESSLHQDTRSDNVGAPIRL
CHHHHCCCHHCCHHHCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCHHHH
LHYVINPIGEPVLIAEHLYPLEPAPQGTFSNGLVEMIALPQEGYFLSLERSYGLGGVGAK
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEE
LFQVTIGNATDTARIESLAGNPETVVPMQKTLLLDLRQLGIGLDNLEGMTLGPRLADGSQ
EEEEEECCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCEECCEECCCCC
SLLLISDDNFSTDQVNQLLLFRLSNSAAKVTSK
EEEEEECCCCCHHHHHEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MMKPKNSWWRSPKILWIKLCLIGSLLIGCAPVVPPAESNPRTFAPLSVEFLDEYWLPKTE
CCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCEECCEEHHHHHHHCCCCCC
FQGTTVGGLSALYYDAQTGDYYALSDDRSQFAPARFYTFDLDIDETGAIPQIQQLNLKGM
CCCCCCCCCEEEEEECCCCCEEEECCCCHHCCCEEEEEEEECCCCCCCCCCCEECCCCCC
TPLTTPDGETFAPGSLDPEGLVLSPRNTLFISSEGDTDAAIDPFVKEFDHEGRELTSLRI
CCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEC
PQRFLTGDRQRGVRNNLGFESLAISAPSQAAVDPFRIFVAPESSLHQDTRSDNVGAPIRL
CHHHHCCCHHCCHHHCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCHHHH
LHYVINPIGEPVLIAEHLYPLEPAPQGTFSNGLVEMIALPQEGYFLSLERSYGLGGVGAK
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEE
LFQVTIGNATDTARIESLAGNPETVVPMQKTLLLDLRQLGIGLDNLEGMTLGPRLADGSQ
EEEEEECCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCEECCEECCCCC
SLLLISDDNFSTDQVNQLLLFRLSNSAAKVTSK
EEEEEECCCCCHHHHHEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA