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The map label for this gene is yciH [C]

Identifier: 170078548

GI number: 170078548

Start: 2025000

End: 2025323

Strand: Direct

Name: yciH [C]

Synonym: SYNPCC7002_A1943

Alternate gene names: 170078548

Gene position: 2025000-2025323 (Clockwise)

Preceding gene: 170078546

Following gene: 170078550

Centisome position: 67.32

GC content: 48.77

Gene sequence:

>324_bases
ATGGCGCGTAAAAAAGTTGTCTATCAAGAATTTGGTAACACTGTCCCAGACGAGACCCCGGAAATCGTTGATCTGCCGCC
CCAACAACAAAGTCCCCGCATCCAAACGAGCCGTTCTGGTCGTAAAGGCAAGACGGTAACTGTAATTACGGGACTACAAC
ATTCCCCAGAGACGTTACAAAAACTCTTAAAGCAGCTAAAAAATAAATGTGGCTCCGGGGGCACCCTCAAGGACAATACC
CTAGAAATCCAGGGAGATCAGCGCCAGCCAATTCTCGCATTCCTCCTTGACCAAGGTTACAAGGCGAAAATTAGCGGTGG
CTAG

Upstream 100 bases:

>100_bases
TTGTAGGCATTTAAAATTTCAAAAAAAGTAGCTTGTAATCCAAGATCCCATAAAACCCGTAAGCTAAGGAAAAGTACACC
CAATCGATTGAATTTGAACG

Downstream 100 bases:

>100_bases
GGAATGGTCGGCGCTTCCGTCCACCAGAAAAGATCGGCAACCTCTGGCGTCGGGGTGAGATCTGGACTTGGATTGAGCAA
TACGGTCTGCTGTTTTAGGT

Product: putative translation initiation factor SUI1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MARKKVVYQEFGNTVPDETPEIVDLPPQQQSPRIQTSRSGRKGKTVTVITGLQHSPETLQKLLKQLKNKCGSGGTLKDNT
LEIQGDQRQPILAFLLDQGYKAKISGG

Sequences:

>Translated_107_residues
MARKKVVYQEFGNTVPDETPEIVDLPPQQQSPRIQTSRSGRKGKTVTVITGLQHSPETLQKLLKQLKNKCGSGGTLKDNT
LEIQGDQRQPILAFLLDQGYKAKISGG
>Mature_106_residues
ARKKVVYQEFGNTVPDETPEIVDLPPQQQSPRIQTSRSGRKGKTVTVITGLQHSPETLQKLLKQLKNKCGSGGTLKDNTL
EIQGDQRQPILAFLLDQGYKAKISGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=75, Percent_Identity=49.3333333333333, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11774; Mature: 11642

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKVVYQEFGNTVPDETPEIVDLPPQQQSPRIQTSRSGRKGKTVTVITGLQHSPETLQ
CCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHH
KLLKQLKNKCGSGGTLKDNTLEIQGDQRQPILAFLLDQGYKAKISGG
HHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHEECCCCCEEEECCC
>Mature Secondary Structure 
ARKKVVYQEFGNTVPDETPEIVDLPPQQQSPRIQTSRSGRKGKTVTVITGLQHSPETLQ
CCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHH
KLLKQLKNKCGSGGTLKDNTLEIQGDQRQPILAFLLDQGYKAKISGG
HHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHEECCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]