Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078546

Identifier: 170078546

GI number: 170078546

Start: 2024443

End: 2024616

Strand: Direct

Name: 170078546

Synonym: SYNPCC7002_A1941

Alternate gene names: NA

Gene position: 2024443-2024616 (Clockwise)

Preceding gene: 170078545

Following gene: 170078548

Centisome position: 67.3

GC content: 45.98

Gene sequence:

>174_bases
ATGCGCTACATGGAAGATGAAGACGGTAAGCTGAATAATTTTGCCCAAGAGCCCAAAATGTACCAAGCAGAGGCAAAAAC
AGCGAAAGAACAAAAAAATTTGCTGGTTATTGGTGTTCTAGGAGGCGTACTTGTGGCGACCCTCATCGGTGTCACGGTAC
TGATCTCCGGTTAG

Upstream 100 bases:

>100_bases
CTTAACTTTTGTTGAGTTTTATTGATAGCTATAAAGTCCGGTTCCTATGATGATCGAACCCCCAGGGGGTTTAAAGATTG
ACAAATTTGAAGGAGCCACC

Downstream 100 bases:

>100_bases
GGGTCTGGTCTGGTCGCGAAGGAAGTCAGGCTACACTAAAGATGTGATGGATCAATCACATTTAAGAGGCGATCGCCATG
AATGAAGGACTTCTTGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MRYMEDEDGKLNNFAQEPKMYQAEAKTAKEQKNLLVIGVLGGVLVATLIGVTVLISG

Sequences:

>Translated_57_residues
MRYMEDEDGKLNNFAQEPKMYQAEAKTAKEQKNLLVIGVLGGVLVATLIGVTVLISG
>Mature_57_residues
MRYMEDEDGKLNNFAQEPKMYQAEAKTAKEQKNLLVIGVLGGVLVATLIGVTVLISG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6196; Mature: 6196

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYMEDEDGKLNNFAQEPKMYQAEAKTAKEQKNLLVIGVLGGVLVATLIGVTVLISG
CCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRYMEDEDGKLNNFAQEPKMYQAEAKTAKEQKNLLVIGVLGGVLVATLIGVTVLISG
CCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA