| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is mtnA [H]
Identifier: 170078528
GI number: 170078528
Start: 2007252
End: 2008280
Strand: Direct
Name: mtnA [H]
Synonym: SYNPCC7002_A1923
Alternate gene names: 170078528
Gene position: 2007252-2008280 (Clockwise)
Preceding gene: 170078527
Following gene: 170078529
Centisome position: 66.73
GC content: 50.34
Gene sequence:
>1029_bases ATGAACTGGAGTCCTTTACACGCGCGGCTACACCAACATTTGAAGGAGTCAAATTTATTGCCTGCAGGGGCCAAGCTCAT CATGGCTGTCTCCGGCGGGCAGGATTCTGTGTGTTTAAGTCGGTTGATGCTGGACTTACAACGCCATTGGCAATGGTCCT TGGCGATCGCCCATTGTCACCATGGCTGGCCCGGTGATGAAGAGATTGCCGCCCACGTACAAACTCTGGGGGCACAATGG CAGTTACCTTTCTACCTCTGCCGCGCGGTGTCTTCTCTCCCAGAAACAGAAAATGCGGCACGCCGCTGGCGCTATGAAAC CCTAACTCACTTAGCAGAACAACTCGATCAGGCCTATGTGGTGACGGGTCATACTCAAAGTGACCGTGCAGAAACCTTAA TATATAACCTGGTGCGGGGGGCGGGGACGGCTGGTCTAGGCAGTCTCACCGAACGGCGATCGCTCTCCAACAAGGTCAAG TTGGTGCGTCCTTTGTTGACAATTACGCGACAGGAAACGGGGGAATTTTGCCGACAATTTAATCTGCTTGTGTGTTTTGA TCCTTTCAATCAACAAATGCGCTTTAAACGCAACCAAATACGCCAGCAAATCTTGCCCCATTTACGGACATTAAACACCC AAGCCGATAAACACCTTGCCCAAACAGCGCTCATTTTGCAGGATGAAAATGACTACCTTGAGGCGATCGCCCAACAATAT CTCCAGCAAGCCCTAACTCCCCAGCAACATCTCCATCGCCTTGTCCTACAGCCCTTACACATTGCCCTCCAACGCCGGAT AATCCGGCAATATCTCCAGCAAGTTTTGCCCAAAATGCCCACCTTCGCCCAAATTAGCGCTACAGTCGAGTTGATCCATG GCTGCAATGGCGATCGCCTCAGCACTTTACCCGGTAAAATTCAACTGCAAGTCATGGGAGAATGGCTTGTGCCGGAAGCA CTAAAATCAAATTTACCCAAATCAACTAATAATCAAGATCATTATCCGCCGCAGGCCAAAGACTATTAA
Upstream 100 bases:
>100_bases ATCTGGGCCAGTTTATCAATGTTGCGATGTTTCGTAAAAAGCCATAAGCCTGGATACGAAGATAATGATCCTATGGGCGT ATTAGTAGATCGATGATTCC
Downstream 100 bases:
>100_bases TTCCGTAGATTTGGGGAGTCTTTGGAAAGAATTTAAAAGGTCATCTTCCCTGGTTTTTCAGTAGTTTCACGGAGTTTTGT TGAAGATTCCGTAAAAAGTA
Product: metallothionein
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MNWSPLHARLHQHLKESNLLPAGAKLIMAVSGGQDSVCLSRLMLDLQRHWQWSLAIAHCHHGWPGDEEIAAHVQTLGAQW QLPFYLCRAVSSLPETENAARRWRYETLTHLAEQLDQAYVVTGHTQSDRAETLIYNLVRGAGTAGLGSLTERRSLSNKVK LVRPLLTITRQETGEFCRQFNLLVCFDPFNQQMRFKRNQIRQQILPHLRTLNTQADKHLAQTALILQDENDYLEAIAQQY LQQALTPQQHLHRLVLQPLHIALQRRIIRQYLQQVLPKMPTFAQISATVELIHGCNGDRLSTLPGKIQLQVMGEWLVPEA LKSNLPKSTNNQDHYPPQAKDY
Sequences:
>Translated_342_residues MNWSPLHARLHQHLKESNLLPAGAKLIMAVSGGQDSVCLSRLMLDLQRHWQWSLAIAHCHHGWPGDEEIAAHVQTLGAQW QLPFYLCRAVSSLPETENAARRWRYETLTHLAEQLDQAYVVTGHTQSDRAETLIYNLVRGAGTAGLGSLTERRSLSNKVK LVRPLLTITRQETGEFCRQFNLLVCFDPFNQQMRFKRNQIRQQILPHLRTLNTQADKHLAQTALILQDENDYLEAIAQQY LQQALTPQQHLHRLVLQPLHIALQRRIIRQYLQQVLPKMPTFAQISATVELIHGCNGDRLSTLPGKIQLQVMGEWLVPEA LKSNLPKSTNNQDHYPPQAKDY >Mature_342_residues MNWSPLHARLHQHLKESNLLPAGAKLIMAVSGGQDSVCLSRLMLDLQRHWQWSLAIAHCHHGWPGDEEIAAHVQTLGAQW QLPFYLCRAVSSLPETENAARRWRYETLTHLAEQLDQAYVVTGHTQSDRAETLIYNLVRGAGTAGLGSLTERRSLSNKVK LVRPLLTITRQETGEFCRQFNLLVCFDPFNQQMRFKRNQIRQQILPHLRTLNTQADKHLAQTALILQDENDYLEAIAQQY LQQALTPQQHLHRLVLQPLHIALQRRIIRQYLQQVLPKMPTFAQISATVELIHGCNGDRLSTLPGKIQLQVMGEWLVPEA LKSNLPKSTNNQDHYPPQAKDY
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=267, Percent_Identity=27.3408239700375, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012795 - InterPro: IPR015262 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3; PF09179 DUF1946 [H]
EC number: NA
Molecular weight: Translated: 39143; Mature: 39143
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWSPLHARLHQHLKESNLLPAGAKLIMAVSGGQDSVCLSRLMLDLQRHWQWSLAIAHCH CCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC HGWPGDEEIAAHVQTLGAQWQLPFYLCRAVSSLPETENAARRWRYETLTHLAEQLDQAYV CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEE VTGHTQSDRAETLIYNLVRGAGTAGLGSLTERRSLSNKVKLVRPLLTITRQETGEFCRQF EECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NLLVCFDPFNQQMRFKRNQIRQQILPHLRTLNTQADKHLAQTALILQDENDYLEAIAQQY CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCHHHHHHHHHHH LQQALTPQQHLHRLVLQPLHIALQRRIIRQYLQQVLPKMPTFAQISATVELIHGCNGDRL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC STLPGKIQLQVMGEWLVPEALKSNLPKSTNNQDHYPPQAKDY CCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNWSPLHARLHQHLKESNLLPAGAKLIMAVSGGQDSVCLSRLMLDLQRHWQWSLAIAHCH CCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC HGWPGDEEIAAHVQTLGAQWQLPFYLCRAVSSLPETENAARRWRYETLTHLAEQLDQAYV CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEE VTGHTQSDRAETLIYNLVRGAGTAGLGSLTERRSLSNKVKLVRPLLTITRQETGEFCRQF EECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NLLVCFDPFNQQMRFKRNQIRQQILPHLRTLNTQADKHLAQTALILQDENDYLEAIAQQY CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCHHHHHHHHHHH LQQALTPQQHLHRLVLQPLHIALQRRIIRQYLQQVLPKMPTFAQISATVELIHGCNGDRL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC STLPGKIQLQVMGEWLVPEALKSNLPKSTNNQDHYPPQAKDY CCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA