Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078527

Identifier: 170078527

GI number: 170078527

Start: 2005441

End: 2007198

Strand: Direct

Name: 170078527

Synonym: SYNPCC7002_A1922

Alternate gene names: NA

Gene position: 2005441-2007198 (Clockwise)

Preceding gene: 170078526

Following gene: 170078528

Centisome position: 66.67

GC content: 46.25

Gene sequence:

>1758_bases
GTGAGCAAAAACTTTCAACCACTGAGCAGCGGTGAAGTGCTGTCGATTAATAGCGAATCTCGTTTTGTAATCGGCCATAG
CACTTTTCGCGTTGACGAGTTCGCCGCCGCCTTAAAGCAACTCTTGCTAGAACAAGGGTTGGGGGGACTCACCGAAGAAA
CCGTTGATTGGTTAACGGATAACGGCATTGAATGTGATGTGCTGCGGTTTGGTGCCTCTGGTTGGGTCAAAGGAAAAGTC
AGGCTACACCTTGAATTTGCCGAAGAAGACGGTGGGGAGGCAAGCGCAGACCCAAAGCCTAAGGCAGCTGCTGATCTCCT
TCCTTCGGTAGCTGCCAGTGATTTCCCTAGTGCGACTGCCTCTACGACTTCTGAATCAGAATCAGACTTTGATGATTTGG
AACTAGAGTTTAACGAAGCAGAATTTGCTGACCTTGGTTTGGATTTTGATGATTCTGCATCTGATACCCCAGAGACAGAT
CTACCAGACCTTGACCTGCCGGACATGGAGGTAGAACCCCAAGATGTTAGTGCAGATTTAGAAGATTTAAATCTAGCGAC
TGCCGATGGTGCTGATTTCTCTGATCAGGATGACCTCGATGATTTTGAGGCTCTTTTTGAAGAATCTAGCGACACAGCCG
AAGCAGACTTGGCAGAACCAATCGACGACCTTGATGATCTGTTCGGGGAAGAAGACTTTGATTTTGATGCTGCTGTTGCC
GAAGTAGAACCTGAAATTCATGGGCCTGACACGGCATCAGAGGAAACTGCGGGAGTCACTGATACCTTCTCAGAAGACCT
AGACTCAGAGGAGTTAGAAGAGGCGCCAGACTTTGCCGAGACAATGACTCCTGAAGCAGATTTTACCGGGATCGCCCCAG
AAGCTGATCACGGTGAGGAGAATATCTCGACTAGCACCTCAGAACCCGTTGAAAAGTCCACCGTTAATGGTAAAGAAACC
ATTGTTTTTCAAGAGACTCTGGTGCAGCCGGATGAAGAGTTTTTAGAAAATATTTTTGATCAAGAAACTTCTGAATCCCC
AGAGCAACAAGCTTCAGAGGCAGAAGCTGAGCTTCAAGAAACCGATGATTTAGAGGCATTATTTGCGGAAGACACACCAG
CTAATGCGCTAAATGAAGCAATTTCTGACGAAGATCTCAATGATTTGTTTGGTGATACAGAAGAGGGAGATTTTGATCTT
GATTTAGATTTAGATGAATTTGCCGACGACGATGAGCCAACTGCAATCACCGTCGATAGCATTGAAGAACAGGAAATGGC
CCTTACAGACCTGTTTGATGAACCGGAGCAGATTCCAGAGGAAGACGATTTATTCCAATCCCTATTGGAAGAGAACCCAA
CCCCTGAGACTGGTGATTTAGAAACTTTAGATCTACCAGAAGATCTACCGGAGATGGAGACAGAAAGTACTCCTGAAGCC
CTAGAAACAGATTCTCTTGAGGCCCCTAATCCCTTTGAAGGGGTGACAGAAGATCAAGCACCAACCCAGGCGGATGTTTC
AGAGGCAGATGATCCGTTTACGGTGTTTACAGGTCAGAACGCCGAAAGTCTAGATGATCTGTCAGGGGATTTGGAGTTGT
CTTTAGATGAGGCAGAAGAGCCATTATCCGAGGATAGTGATCTCGATTTAGACGATCTTTTTGATGACTCAGAAGTTTCA
AGTCCCCAAAATACCCAAGCATCGGAGGATGATCTGGGCCAGTTTATCAATGTTGCGATGTTTCGTAAAAAGCCATAA

Upstream 100 bases:

>100_bases
CCGATTAAAATAAGACACAAAGGCGGGAATTGTGATCAATCCGCCCGAACCCTCTTTTAGCTTGATGACCTAACTATTTT
GACACTGTGGGGAAATAACC

Downstream 100 bases:

>100_bases
GCCTGGATACGAAGATAATGATCCTATGGGCGTATTAGTAGATCGATGATTCCATGAACTGGAGTCCTTTACACGCGCGG
CTACACCAACATTTGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MSKNFQPLSSGEVLSINSESRFVIGHSTFRVDEFAAALKQLLLEQGLGGLTEETVDWLTDNGIECDVLRFGASGWVKGKV
RLHLEFAEEDGGEASADPKPKAAADLLPSVAASDFPSATASTTSESESDFDDLELEFNEAEFADLGLDFDDSASDTPETD
LPDLDLPDMEVEPQDVSADLEDLNLATADGADFSDQDDLDDFEALFEESSDTAEADLAEPIDDLDDLFGEEDFDFDAAVA
EVEPEIHGPDTASEETAGVTDTFSEDLDSEELEEAPDFAETMTPEADFTGIAPEADHGEENISTSTSEPVEKSTVNGKET
IVFQETLVQPDEEFLENIFDQETSESPEQQASEAEAELQETDDLEALFAEDTPANALNEAISDEDLNDLFGDTEEGDFDL
DLDLDEFADDDEPTAITVDSIEEQEMALTDLFDEPEQIPEEDDLFQSLLEENPTPETGDLETLDLPEDLPEMETESTPEA
LETDSLEAPNPFEGVTEDQAPTQADVSEADDPFTVFTGQNAESLDDLSGDLELSLDEAEEPLSEDSDLDLDDLFDDSEVS
SPQNTQASEDDLGQFINVAMFRKKP

Sequences:

>Translated_585_residues
MSKNFQPLSSGEVLSINSESRFVIGHSTFRVDEFAAALKQLLLEQGLGGLTEETVDWLTDNGIECDVLRFGASGWVKGKV
RLHLEFAEEDGGEASADPKPKAAADLLPSVAASDFPSATASTTSESESDFDDLELEFNEAEFADLGLDFDDSASDTPETD
LPDLDLPDMEVEPQDVSADLEDLNLATADGADFSDQDDLDDFEALFEESSDTAEADLAEPIDDLDDLFGEEDFDFDAAVA
EVEPEIHGPDTASEETAGVTDTFSEDLDSEELEEAPDFAETMTPEADFTGIAPEADHGEENISTSTSEPVEKSTVNGKET
IVFQETLVQPDEEFLENIFDQETSESPEQQASEAEAELQETDDLEALFAEDTPANALNEAISDEDLNDLFGDTEEGDFDL
DLDLDEFADDDEPTAITVDSIEEQEMALTDLFDEPEQIPEEDDLFQSLLEENPTPETGDLETLDLPEDLPEMETESTPEA
LETDSLEAPNPFEGVTEDQAPTQADVSEADDPFTVFTGQNAESLDDLSGDLELSLDEAEEPLSEDSDLDLDDLFDDSEVS
SPQNTQASEDDLGQFINVAMFRKKP
>Mature_584_residues
SKNFQPLSSGEVLSINSESRFVIGHSTFRVDEFAAALKQLLLEQGLGGLTEETVDWLTDNGIECDVLRFGASGWVKGKVR
LHLEFAEEDGGEASADPKPKAAADLLPSVAASDFPSATASTTSESESDFDDLELEFNEAEFADLGLDFDDSASDTPETDL
PDLDLPDMEVEPQDVSADLEDLNLATADGADFSDQDDLDDFEALFEESSDTAEADLAEPIDDLDDLFGEEDFDFDAAVAE
VEPEIHGPDTASEETAGVTDTFSEDLDSEELEEAPDFAETMTPEADFTGIAPEADHGEENISTSTSEPVEKSTVNGKETI
VFQETLVQPDEEFLENIFDQETSESPEQQASEAEAELQETDDLEALFAEDTPANALNEAISDEDLNDLFGDTEEGDFDLD
LDLDEFADDDEPTAITVDSIEEQEMALTDLFDEPEQIPEEDDLFQSLLEENPTPETGDLETLDLPEDLPEMETESTPEAL
ETDSLEAPNPFEGVTEDQAPTQADVSEADDPFTVFTGQNAESLDDLSGDLELSLDEAEEPLSEDSDLDLDDLFDDSEVSS
PQNTQASEDDLGQFINVAMFRKKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63737; Mature: 63606

Theoretical pI: Translated: 3.08; Mature: 3.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNFQPLSSGEVLSINSESRFVIGHSTFRVDEFAAALKQLLLEQGLGGLTEETVDWLTD
CCCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
NGIECDVLRFGASGWVKGKVRLHLEFAEEDGGEASADPKPKAAADLLPSVAASDFPSATA
CCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
STTSESESDFDDLELEFNEAEFADLGLDFDDSASDTPETDLPDLDLPDMEVEPQDVSADL
CCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EDLNLATADGADFSDQDDLDDFEALFEESSDTAEADLAEPIDDLDDLFGEEDFDFDAAVA
HHCEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EVEPEIHGPDTASEETAGVTDTFSEDLDSEELEEAPDFAETMTPEADFTGIAPEADHGEE
HCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCC
NISTSTSEPVEKSTVNGKETIVFQETLVQPDEEFLENIFDQETSESPEQQASEAEAELQE
CCCCCCCCCCHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
TDDLEALFAEDTPANALNEAISDEDLNDLFGDTEEGDFDLDLDLDEFADDDEPTAITVDS
CCCHHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEECCCHHHHCCCCCCCEEEECC
IEEQEMALTDLFDEPEQIPEEDDLFQSLLEENPTPETGDLETLDLPEDLPEMETESTPEA
CCHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCCCCCCEECCCCHHCCCCCCCCCCCH
LETDSLEAPNPFEGVTEDQAPTQADVSEADDPFTVFTGQNAESLDDLSGDLELSLDEAEE
HCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCHHHHHHCCCCEEEECHHHHC
PLSEDSDLDLDDLFDDSEVSSPQNTQASEDDLGQFINVAMFRKKP
CCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKNFQPLSSGEVLSINSESRFVIGHSTFRVDEFAAALKQLLLEQGLGGLTEETVDWLTD
CCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
NGIECDVLRFGASGWVKGKVRLHLEFAEEDGGEASADPKPKAAADLLPSVAASDFPSATA
CCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
STTSESESDFDDLELEFNEAEFADLGLDFDDSASDTPETDLPDLDLPDMEVEPQDVSADL
CCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EDLNLATADGADFSDQDDLDDFEALFEESSDTAEADLAEPIDDLDDLFGEEDFDFDAAVA
HHCEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EVEPEIHGPDTASEETAGVTDTFSEDLDSEELEEAPDFAETMTPEADFTGIAPEADHGEE
HCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCC
NISTSTSEPVEKSTVNGKETIVFQETLVQPDEEFLENIFDQETSESPEQQASEAEAELQE
CCCCCCCCCCHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
TDDLEALFAEDTPANALNEAISDEDLNDLFGDTEEGDFDLDLDLDEFADDDEPTAITVDS
CCCHHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEECCCHHHHCCCCCCCEEEECC
IEEQEMALTDLFDEPEQIPEEDDLFQSLLEENPTPETGDLETLDLPEDLPEMETESTPEA
CCHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCCCCCCEECCCCHHCCCCCCCCCCCH
LETDSLEAPNPFEGVTEDQAPTQADVSEADDPFTVFTGQNAESLDDLSGDLELSLDEAEE
HCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCHHHHHHCCCCEEEECHHHHC
PLSEDSDLDLDDLFDDSEVSSPQNTQASEDDLGQFINVAMFRKKP
CCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA