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The map label for this gene is 170078504

Identifier: 170078504

GI number: 170078504

Start: 1983899

End: 1984702

Strand: Direct

Name: 170078504

Synonym: SYNPCC7002_A1899

Alternate gene names: NA

Gene position: 1983899-1984702 (Clockwise)

Preceding gene: 170078503

Following gene: 170078510

Centisome position: 65.95

GC content: 51.49

Gene sequence:

>804_bases
TTGAGCGATTTATCTATGCGCCCAATTTTTAGTTTTCTGTGTAGTCTGCTGCTGTGGATTAGCCTTTGTTGGCCCAGTGT
TGCCCTCACCAATGCTCAAATCTCTGAAGGCGATCGCCTCACCCAAACTGCGATCCAGGCAGCGAAAAAAGGTGATTTGT
TTACCGCCGAAAAAATTTGGTCAGATTTAATTGAAGCATTTCCCCAAAATCCGGCCCTCTGGAGCAACCGAGGCAATACG
AGGGCGAGTTTAAATCAGTTTGATGCGGCCCTTGACGATCTCAATGAAGCGATTCGCCTGGCCCCAAACCAAGTCGAACC
CTACTTTAATCGCGGTGCGATCCTTGAACAACAGCAACGGTTTAGCGAAGCGATCGCCGACTATGACAAAGCTATCGAAC
TTGATCCCCAAGAGGCGATCGCCTACCACAATCGCGGCAATGCCTACGGCAGTTTGGGCAATTGGGAACAGGCCCGCCAG
GACTACCAGAAAGCAACGGAACTGGATCCCCGCTTTGCCTGGGCCGCCGAAAGTTATGCCCTTGCTCTGTATCAAGTTGG
CGAAAACAACCAAGCGATCCAGCGAATGAAAGGCCTGGTGCGCAAATACCCGATGTTTGCCGATGCGCGGGTGGCTCTGA
CGGCGATGCTCTGGGGCAACCACCAATTCGGCGAGGCTGAAAGTAACTGGGTGGCCGCAGCGGGTTTAGACGATCGTTAC
CGGGATTTAGAATGGTTAGAGGATATTCGTCGCTTTCCGCCGAAAGTCCTTGAAGATTTAGATAATTTCCTCAATCTCCA
GTAG

Upstream 100 bases:

>100_bases
CGGGTGTCGGGCATTGGGGAAAAGAAAGCCGCCGACCTGGCCGGAAAAGTCACTTGGTAGAGACGCGTTATAGTACCCTT
AGCCCTTTCTCTGAACGCCG

Downstream 100 bases:

>100_bases
ATTTTAAAAAACCTAGGCTGATTTTGCAGTTTGCAGCAGTTTAGCCCGCACCAGTTTAATCGCATCGTAGCTGTATTTTT
CCTGGAGGTGCTCCCGCAAC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSDLSMRPIFSFLCSLLLWISLCWPSVALTNAQISEGDRLTQTAIQAAKKGDLFTAEKIWSDLIEAFPQNPALWSNRGNT
RASLNQFDAALDDLNEAIRLAPNQVEPYFNRGAILEQQQRFSEAIADYDKAIELDPQEAIAYHNRGNAYGSLGNWEQARQ
DYQKATELDPRFAWAAESYALALYQVGENNQAIQRMKGLVRKYPMFADARVALTAMLWGNHQFGEAESNWVAAAGLDDRY
RDLEWLEDIRRFPPKVLEDLDNFLNLQ

Sequences:

>Translated_267_residues
MSDLSMRPIFSFLCSLLLWISLCWPSVALTNAQISEGDRLTQTAIQAAKKGDLFTAEKIWSDLIEAFPQNPALWSNRGNT
RASLNQFDAALDDLNEAIRLAPNQVEPYFNRGAILEQQQRFSEAIADYDKAIELDPQEAIAYHNRGNAYGSLGNWEQARQ
DYQKATELDPRFAWAAESYALALYQVGENNQAIQRMKGLVRKYPMFADARVALTAMLWGNHQFGEAESNWVAAAGLDDRY
RDLEWLEDIRRFPPKVLEDLDNFLNLQ
>Mature_266_residues
SDLSMRPIFSFLCSLLLWISLCWPSVALTNAQISEGDRLTQTAIQAAKKGDLFTAEKIWSDLIEAFPQNPALWSNRGNTR
ASLNQFDAALDDLNEAIRLAPNQVEPYFNRGAILEQQQRFSEAIADYDKAIELDPQEAIAYHNRGNAYGSLGNWEQARQD
YQKATELDPRFAWAAESYALALYQVGENNQAIQRMKGLVRKYPMFADARVALTAMLWGNHQFGEAESNWVAAAGLDDRYR
DLEWLEDIRRFPPKVLEDLDNFLNLQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=166, Percent_Identity=28.9156626506024, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI32307150, Length=166, Percent_Identity=28.9156626506024, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=165, Percent_Identity=27.8787878787879, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=165, Percent_Identity=27.8787878787879, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17647755, Length=174, Percent_Identity=31.0344827586207, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24585827, Length=174, Percent_Identity=31.0344827586207, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24585829, Length=174, Percent_Identity=31.0344827586207, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17137540, Length=127, Percent_Identity=34.6456692913386, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 30414; Mature: 30283

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLSMRPIFSFLCSLLLWISLCWPSVALTNAQISEGDRLTQTAIQAAKKGDLFTAEKIW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
SDLIEAFPQNPALWSNRGNTRASLNQFDAALDDLNEAIRLAPNQVEPYFNRGAILEQQQR
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHH
FSEAIADYDKAIELDPQEAIAYHNRGNAYGSLGNWEQARQDYQKATELDPRFAWAAESYA
HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LALYQVGENNQAIQRMKGLVRKYPMFADARVALTAMLWGNHQFGEAESNWVAAAGLDDRY
EEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHH
RDLEWLEDIRRFPPKVLEDLDNFLNLQ
HHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDLSMRPIFSFLCSLLLWISLCWPSVALTNAQISEGDRLTQTAIQAAKKGDLFTAEKIW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
SDLIEAFPQNPALWSNRGNTRASLNQFDAALDDLNEAIRLAPNQVEPYFNRGAILEQQQR
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHH
FSEAIADYDKAIELDPQEAIAYHNRGNAYGSLGNWEQARQDYQKATELDPRFAWAAESYA
HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LALYQVGENNQAIQRMKGLVRKYPMFADARVALTAMLWGNHQFGEAESNWVAAAGLDDRY
EEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHH
RDLEWLEDIRRFPPKVLEDLDNFLNLQ
HHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]