Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078454

Identifier: 170078454

GI number: 170078454

Start: 1937157

End: 1937969

Strand: Reverse

Name: 170078454

Synonym: SYNPCC7002_A1848

Alternate gene names: NA

Gene position: 1937969-1937157 (Counterclockwise)

Preceding gene: 170078456

Following gene: 170078450

Centisome position: 64.43

GC content: 48.95

Gene sequence:

>813_bases
ATGGCTGAATATATCCACGGGTATGATCCAGAGGAACAACAACGTCTCGTTGATCAAGCACGCTACTGGGGCGATCGCCT
GTTGTTAAAAGATCTCGCATTTGACCCCAAGGCGAAAATTTTAGACATTGGTTGTGGCGTCGGCGCTGTCCTTGAGATCA
TCGGTGAAAAGTTTCCCACCCTAACCTTTGCGGGCATCGATCACCAACCCCGTCAAATTGCCTATGCCACAGAATATTTA
CGTCGCCTGGGGTTCAAGACTGACCTCCAAGTGGGGGATGCCTACACTTTGCCCTGGGCAGAAAATACCTTTGATTTTGC
CCTGACCGTGTGGCTCCTGGAGCACGTACCCGATTCGGCGGGAATTATTGCTGAAGCGTTGCGGGTTTTACGACCAGGGG
GCAAAATTTGCCTGACAGAAACCGATTACCAAAATCTTTTAATTTATCCGCCCCATCCTGATTTTGACTATTTTCAGCAG
GCTCTTTGTGAATTATTTCAAGTTGCAGACGGCAATCCCTATGTTGGTCGCAGCTTAGGGGGATATTTAGAACAGGCGGG
CTTTACTGGGGTTAAAAATGAGGCGATCGCCGTTCACCATTGGCACAGTCCCCAAAATCAAGATCTAAAAGGCTTAGTCG
ATCATCTCGACACCTGGATCAAACTGATGATCCCCCAGATGGTAGAGAAATTAGGCAAAAATCCCGACCACCTCGAAAAC
GGCTTAACTCACTTTCGTCAAGTGCCGCAACATCCCCACGGCGCAATTACCCTGACCATTTATCGCGCCACAGGTTGCAA
GCCTCAACCATAA

Upstream 100 bases:

>100_bases
CCTGACTTGAATCTGCCAAAAACAAGCCACAATGACAGAGAAAGGGGGATTAAGTGCGTTAGATTGTTGAGCAGGCATAT
TTTGGGTGAAAAATAAGGAT

Downstream 100 bases:

>100_bases
AAAAATCCCCCTAGGAATAGGAGGACGATCAATCATTCACAACAGAAAAAAATCTAAGCTGGATTTGTGGCCGAAGGACT
TCTCTCAATGACCTGATCAA

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MAEYIHGYDPEEQQRLVDQARYWGDRLLLKDLAFDPKAKILDIGCGVGAVLEIIGEKFPTLTFAGIDHQPRQIAYATEYL
RRLGFKTDLQVGDAYTLPWAENTFDFALTVWLLEHVPDSAGIIAEALRVLRPGGKICLTETDYQNLLIYPPHPDFDYFQQ
ALCELFQVADGNPYVGRSLGGYLEQAGFTGVKNEAIAVHHWHSPQNQDLKGLVDHLDTWIKLMIPQMVEKLGKNPDHLEN
GLTHFRQVPQHPHGAITLTIYRATGCKPQP

Sequences:

>Translated_270_residues
MAEYIHGYDPEEQQRLVDQARYWGDRLLLKDLAFDPKAKILDIGCGVGAVLEIIGEKFPTLTFAGIDHQPRQIAYATEYL
RRLGFKTDLQVGDAYTLPWAENTFDFALTVWLLEHVPDSAGIIAEALRVLRPGGKICLTETDYQNLLIYPPHPDFDYFQQ
ALCELFQVADGNPYVGRSLGGYLEQAGFTGVKNEAIAVHHWHSPQNQDLKGLVDHLDTWIKLMIPQMVEKLGKNPDHLEN
GLTHFRQVPQHPHGAITLTIYRATGCKPQP
>Mature_269_residues
AEYIHGYDPEEQQRLVDQARYWGDRLLLKDLAFDPKAKILDIGCGVGAVLEIIGEKFPTLTFAGIDHQPRQIAYATEYLR
RLGFKTDLQVGDAYTLPWAENTFDFALTVWLLEHVPDSAGIIAEALRVLRPGGKICLTETDYQNLLIYPPHPDFDYFQQA
LCELFQVADGNPYVGRSLGGYLEQAGFTGVKNEAIAVHHWHSPQNQDLKGLVDHLDTWIKLMIPQMVEKLGKNPDHLENG
LTHFRQVPQHPHGAITLTIYRATGCKPQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08241 Methyltransf_11; PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 30485; Mature: 30354

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYIHGYDPEEQQRLVDQARYWGDRLLLKDLAFDPKAKILDIGCGVGAVLEIIGEKFPT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCC
LTFAGIDHQPRQIAYATEYLRRLGFKTDLQVGDAYTLPWAENTFDFALTVWLLEHVPDSA
EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCC
GIIAEALRVLRPGGKICLTETDYQNLLIYPPHPDFDYFQQALCELFQVADGNPYVGRSLG
HHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
GYLEQAGFTGVKNEAIAVHHWHSPQNQDLKGLVDHLDTWIKLMIPQMVEKLGKNPDHLEN
HHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GLTHFRQVPQHPHGAITLTIYRATGCKPQP
HHHHHHHCCCCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure 
AEYIHGYDPEEQQRLVDQARYWGDRLLLKDLAFDPKAKILDIGCGVGAVLEIIGEKFPT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCC
LTFAGIDHQPRQIAYATEYLRRLGFKTDLQVGDAYTLPWAENTFDFALTVWLLEHVPDSA
EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCC
GIIAEALRVLRPGGKICLTETDYQNLLIYPPHPDFDYFQQALCELFQVADGNPYVGRSLG
HHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
GYLEQAGFTGVKNEAIAVHHWHSPQNQDLKGLVDHLDTWIKLMIPQMVEKLGKNPDHLEN
HHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GLTHFRQVPQHPHGAITLTIYRATGCKPQP
HHHHHHHCCCCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155856 [H]