| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078454
Identifier: 170078454
GI number: 170078454
Start: 1937157
End: 1937969
Strand: Reverse
Name: 170078454
Synonym: SYNPCC7002_A1848
Alternate gene names: NA
Gene position: 1937969-1937157 (Counterclockwise)
Preceding gene: 170078456
Following gene: 170078450
Centisome position: 64.43
GC content: 48.95
Gene sequence:
>813_bases ATGGCTGAATATATCCACGGGTATGATCCAGAGGAACAACAACGTCTCGTTGATCAAGCACGCTACTGGGGCGATCGCCT GTTGTTAAAAGATCTCGCATTTGACCCCAAGGCGAAAATTTTAGACATTGGTTGTGGCGTCGGCGCTGTCCTTGAGATCA TCGGTGAAAAGTTTCCCACCCTAACCTTTGCGGGCATCGATCACCAACCCCGTCAAATTGCCTATGCCACAGAATATTTA CGTCGCCTGGGGTTCAAGACTGACCTCCAAGTGGGGGATGCCTACACTTTGCCCTGGGCAGAAAATACCTTTGATTTTGC CCTGACCGTGTGGCTCCTGGAGCACGTACCCGATTCGGCGGGAATTATTGCTGAAGCGTTGCGGGTTTTACGACCAGGGG GCAAAATTTGCCTGACAGAAACCGATTACCAAAATCTTTTAATTTATCCGCCCCATCCTGATTTTGACTATTTTCAGCAG GCTCTTTGTGAATTATTTCAAGTTGCAGACGGCAATCCCTATGTTGGTCGCAGCTTAGGGGGATATTTAGAACAGGCGGG CTTTACTGGGGTTAAAAATGAGGCGATCGCCGTTCACCATTGGCACAGTCCCCAAAATCAAGATCTAAAAGGCTTAGTCG ATCATCTCGACACCTGGATCAAACTGATGATCCCCCAGATGGTAGAGAAATTAGGCAAAAATCCCGACCACCTCGAAAAC GGCTTAACTCACTTTCGTCAAGTGCCGCAACATCCCCACGGCGCAATTACCCTGACCATTTATCGCGCCACAGGTTGCAA GCCTCAACCATAA
Upstream 100 bases:
>100_bases CCTGACTTGAATCTGCCAAAAACAAGCCACAATGACAGAGAAAGGGGGATTAAGTGCGTTAGATTGTTGAGCAGGCATAT TTTGGGTGAAAAATAAGGAT
Downstream 100 bases:
>100_bases AAAAATCCCCCTAGGAATAGGAGGACGATCAATCATTCACAACAGAAAAAAATCTAAGCTGGATTTGTGGCCGAAGGACT TCTCTCAATGACCTGATCAA
Product: methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MAEYIHGYDPEEQQRLVDQARYWGDRLLLKDLAFDPKAKILDIGCGVGAVLEIIGEKFPTLTFAGIDHQPRQIAYATEYL RRLGFKTDLQVGDAYTLPWAENTFDFALTVWLLEHVPDSAGIIAEALRVLRPGGKICLTETDYQNLLIYPPHPDFDYFQQ ALCELFQVADGNPYVGRSLGGYLEQAGFTGVKNEAIAVHHWHSPQNQDLKGLVDHLDTWIKLMIPQMVEKLGKNPDHLEN GLTHFRQVPQHPHGAITLTIYRATGCKPQP
Sequences:
>Translated_270_residues MAEYIHGYDPEEQQRLVDQARYWGDRLLLKDLAFDPKAKILDIGCGVGAVLEIIGEKFPTLTFAGIDHQPRQIAYATEYL RRLGFKTDLQVGDAYTLPWAENTFDFALTVWLLEHVPDSAGIIAEALRVLRPGGKICLTETDYQNLLIYPPHPDFDYFQQ ALCELFQVADGNPYVGRSLGGYLEQAGFTGVKNEAIAVHHWHSPQNQDLKGLVDHLDTWIKLMIPQMVEKLGKNPDHLEN GLTHFRQVPQHPHGAITLTIYRATGCKPQP >Mature_269_residues AEYIHGYDPEEQQRLVDQARYWGDRLLLKDLAFDPKAKILDIGCGVGAVLEIIGEKFPTLTFAGIDHQPRQIAYATEYLR RLGFKTDLQVGDAYTLPWAENTFDFALTVWLLEHVPDSAGIIAEALRVLRPGGKICLTETDYQNLLIYPPHPDFDYFQQA LCELFQVADGNPYVGRSLGGYLEQAGFTGVKNEAIAVHHWHSPQNQDLKGLVDHLDTWIKLMIPQMVEKLGKNPDHLENG LTHFRQVPQHPHGAITLTIYRATGCKPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR005149 - InterPro: IPR011991 [H]
Pfam domain/function: PF08241 Methyltransf_11; PF03551 PadR [H]
EC number: NA
Molecular weight: Translated: 30485; Mature: 30354
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEYIHGYDPEEQQRLVDQARYWGDRLLLKDLAFDPKAKILDIGCGVGAVLEIIGEKFPT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCC LTFAGIDHQPRQIAYATEYLRRLGFKTDLQVGDAYTLPWAENTFDFALTVWLLEHVPDSA EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCC GIIAEALRVLRPGGKICLTETDYQNLLIYPPHPDFDYFQQALCELFQVADGNPYVGRSLG HHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH GYLEQAGFTGVKNEAIAVHHWHSPQNQDLKGLVDHLDTWIKLMIPQMVEKLGKNPDHLEN HHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GLTHFRQVPQHPHGAITLTIYRATGCKPQP HHHHHHHCCCCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure AEYIHGYDPEEQQRLVDQARYWGDRLLLKDLAFDPKAKILDIGCGVGAVLEIIGEKFPT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCC LTFAGIDHQPRQIAYATEYLRRLGFKTDLQVGDAYTLPWAENTFDFALTVWLLEHVPDSA EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCC GIIAEALRVLRPGGKICLTETDYQNLLIYPPHPDFDYFQQALCELFQVADGNPYVGRSLG HHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH GYLEQAGFTGVKNEAIAVHHWHSPQNQDLKGLVDHLDTWIKLMIPQMVEKLGKNPDHLEN HHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GLTHFRQVPQHPHGAITLTIYRATGCKPQP HHHHHHHCCCCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155856 [H]