| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078387
Identifier: 170078387
GI number: 170078387
Start: 1866640
End: 1867230
Strand: Reverse
Name: 170078387
Synonym: SYNPCC7002_A1781
Alternate gene names: NA
Gene position: 1867230-1866640 (Counterclockwise)
Preceding gene: 170078388
Following gene: 170078372
Centisome position: 62.07
GC content: 48.56
Gene sequence:
>591_bases ATGAATCTAAAAACGAACCTCCTTGAAACCATTGCCGGAAAAAATCGTGGTCTGATCGCCACTGAAGTAGACCGCGCCAA TATCCTCGCCATCGTCGATCGCCTCGAAGACCAAAACCCGACCCCCAAGCCCCTAGAAGCGACAACCTTACTCGAAGGGG ATTGGCGACTGATTTATACCACCAGCAAAGGCATCTTGGGGATCAATCGCTTTCCCCTTTTGCAGCTAGGGCAGGTTTAC CAATGTGTGCGGCCACTCCAGCAAAAAATCTACAACATCGCCGAACTAGAGGGGATTCCTTTCCTTGAAGGCTTAGTGCT TGTGGAAGCCTCTTTCACTCCCGTCTCTGATCAGCGGGTGAATGTTTTCTTCAATCGCTACGTGATTGGCTCCCAGCGCC TAATGAACTACCGTTTTCCGAAAGGACTCGTCGAGCAAATGTTAGCCGGGAAAAAATTCTTTCCTGTTGATGTGGGAATT AACAGCAAAAATAATAATGGCTGGCTTGATATTACTTATCTCGACGAAGATCTGCGCATTGGCCGGGGGAATGAGGGTAG CGTGTTTGTCCTAAGCCGTGAAAAGTACTAA
Upstream 100 bases:
>100_bases CGAGATAACTTGGCCCTGCTGATCGCCGCTGAAGGGATATGAGAAAATAATCTATGGCCTAAATTTCCTTAGACCTGCGC TGACCACTGCTCACCTTTCC
Downstream 100 bases:
>100_bases CTGACTGCTGCAATCCCCAAAAAACTAAAAGACCCGGAGCCTACGCCTACCACGAGCATCCCGTATTGCTGCTACCTTCC GGTCCTGACAAGGTTTGGGC
Product: fibrillin
Products: NA
Alternate protein names: Fibrillin; PAP Fibrillin; PAP/Fibrillin Family; PAP_fibrillin; PAP/Fibrillin Family Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MNLKTNLLETIAGKNRGLIATEVDRANILAIVDRLEDQNPTPKPLEATTLLEGDWRLIYTTSKGILGINRFPLLQLGQVY QCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRVNVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGI NSKNNNGWLDITYLDEDLRIGRGNEGSVFVLSREKY
Sequences:
>Translated_196_residues MNLKTNLLETIAGKNRGLIATEVDRANILAIVDRLEDQNPTPKPLEATTLLEGDWRLIYTTSKGILGINRFPLLQLGQVY QCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRVNVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGI NSKNNNGWLDITYLDEDLRIGRGNEGSVFVLSREKY >Mature_196_residues MNLKTNLLETIAGKNRGLIATEVDRANILAIVDRLEDQNPTPKPLEATTLLEGDWRLIYTTSKGILGINRFPLLQLGQVY QCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRVNVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGI NSKNNNGWLDITYLDEDLRIGRGNEGSVFVLSREKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22235; Mature: 22235
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKTNLLETIAGKNRGLIATEVDRANILAIVDRLEDQNPTPKPLEATTLLEGDWRLIYT CCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE TSKGILGINRFPLLQLGQVYQCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRV ECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEE NVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGINSKNNNGWLDITYLDEDLRI EEEEEEEEECCHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCCEE GRGNEGSVFVLSREKY CCCCCCCEEEEEECCC >Mature Secondary Structure MNLKTNLLETIAGKNRGLIATEVDRANILAIVDRLEDQNPTPKPLEATTLLEGDWRLIYT CCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE TSKGILGINRFPLLQLGQVYQCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRV ECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEE NVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGINSKNNNGWLDITYLDEDLRI EEEEEEEEECCHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCCEE GRGNEGSVFVLSREKY CCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA