Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078387

Identifier: 170078387

GI number: 170078387

Start: 1866640

End: 1867230

Strand: Reverse

Name: 170078387

Synonym: SYNPCC7002_A1781

Alternate gene names: NA

Gene position: 1867230-1866640 (Counterclockwise)

Preceding gene: 170078388

Following gene: 170078372

Centisome position: 62.07

GC content: 48.56

Gene sequence:

>591_bases
ATGAATCTAAAAACGAACCTCCTTGAAACCATTGCCGGAAAAAATCGTGGTCTGATCGCCACTGAAGTAGACCGCGCCAA
TATCCTCGCCATCGTCGATCGCCTCGAAGACCAAAACCCGACCCCCAAGCCCCTAGAAGCGACAACCTTACTCGAAGGGG
ATTGGCGACTGATTTATACCACCAGCAAAGGCATCTTGGGGATCAATCGCTTTCCCCTTTTGCAGCTAGGGCAGGTTTAC
CAATGTGTGCGGCCACTCCAGCAAAAAATCTACAACATCGCCGAACTAGAGGGGATTCCTTTCCTTGAAGGCTTAGTGCT
TGTGGAAGCCTCTTTCACTCCCGTCTCTGATCAGCGGGTGAATGTTTTCTTCAATCGCTACGTGATTGGCTCCCAGCGCC
TAATGAACTACCGTTTTCCGAAAGGACTCGTCGAGCAAATGTTAGCCGGGAAAAAATTCTTTCCTGTTGATGTGGGAATT
AACAGCAAAAATAATAATGGCTGGCTTGATATTACTTATCTCGACGAAGATCTGCGCATTGGCCGGGGGAATGAGGGTAG
CGTGTTTGTCCTAAGCCGTGAAAAGTACTAA

Upstream 100 bases:

>100_bases
CGAGATAACTTGGCCCTGCTGATCGCCGCTGAAGGGATATGAGAAAATAATCTATGGCCTAAATTTCCTTAGACCTGCGC
TGACCACTGCTCACCTTTCC

Downstream 100 bases:

>100_bases
CTGACTGCTGCAATCCCCAAAAAACTAAAAGACCCGGAGCCTACGCCTACCACGAGCATCCCGTATTGCTGCTACCTTCC
GGTCCTGACAAGGTTTGGGC

Product: fibrillin

Products: NA

Alternate protein names: Fibrillin; PAP Fibrillin; PAP/Fibrillin Family; PAP_fibrillin; PAP/Fibrillin Family Protein

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNLKTNLLETIAGKNRGLIATEVDRANILAIVDRLEDQNPTPKPLEATTLLEGDWRLIYTTSKGILGINRFPLLQLGQVY
QCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRVNVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGI
NSKNNNGWLDITYLDEDLRIGRGNEGSVFVLSREKY

Sequences:

>Translated_196_residues
MNLKTNLLETIAGKNRGLIATEVDRANILAIVDRLEDQNPTPKPLEATTLLEGDWRLIYTTSKGILGINRFPLLQLGQVY
QCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRVNVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGI
NSKNNNGWLDITYLDEDLRIGRGNEGSVFVLSREKY
>Mature_196_residues
MNLKTNLLETIAGKNRGLIATEVDRANILAIVDRLEDQNPTPKPLEATTLLEGDWRLIYTTSKGILGINRFPLLQLGQVY
QCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRVNVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGI
NSKNNNGWLDITYLDEDLRIGRGNEGSVFVLSREKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22235; Mature: 22235

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKTNLLETIAGKNRGLIATEVDRANILAIVDRLEDQNPTPKPLEATTLLEGDWRLIYT
CCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE
TSKGILGINRFPLLQLGQVYQCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRV
ECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEE
NVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGINSKNNNGWLDITYLDEDLRI
EEEEEEEEECCHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCCEE
GRGNEGSVFVLSREKY
CCCCCCCEEEEEECCC
>Mature Secondary Structure
MNLKTNLLETIAGKNRGLIATEVDRANILAIVDRLEDQNPTPKPLEATTLLEGDWRLIYT
CCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE
TSKGILGINRFPLLQLGQVYQCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRV
ECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEE
NVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGINSKNNNGWLDITYLDEDLRI
EEEEEEEEECCHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCCEE
GRGNEGSVFVLSREKY
CCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA