Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078349

Identifier: 170078349

GI number: 170078349

Start: 1828469

End: 1829575

Strand: Direct

Name: 170078349

Synonym: SYNPCC7002_A1742

Alternate gene names: NA

Gene position: 1828469-1829575 (Clockwise)

Preceding gene: 170078348

Following gene: 170078350

Centisome position: 60.79

GC content: 48.15

Gene sequence:

>1107_bases
ATGATCCGCATTTATACACAACAGACCCAGGGCCAGGCTTGGCTCAGTAACCACCAGCAAAAATCGGTCGTTTTCGCCTG
TGGGTTGGGCTTTACAGATACGGCTTTAATTCCGAACATTTCCGCTGCCGGGGCCACCCCAGAGGCGCGCAAATATACAG
CGATCGCCGATGCAGAATGTATTTGCCATGGTTTCCGAGAAAAAGCCATTTATCCCTTACCACCGTTAATTGTCGGGGCG
TCGCCGGCGATTTTATCCCGTGCTATTTTGTCGCATTATCAAATTCCTGCCTATTTATTTGACACGGGCTTATGGCTTAA
ACCAGACAAAAATGCCGTGGATTGTATTGATGTCAGTGGTCAAAAAGCAAGGTGTGTTTCGACAGGAAAGGCCCTCGAAT
TTTCAACGGTGAACAAACTTTTCGAGCAGGGTTTAACCTGGGGCGAAACATTAGCAACCCAATATCTCAATCATTTGTTC
GTGTTGGGAGAATGTGTGGTCGCAGGCACCACAACGGCATTGGGGGTGTTAACAGGATTAGGTTATGACGCCAACCAGAA
AGTGAATAGCAGTTATATCGAATGTAACCACGATTTAAAGTGGCAAATTGTGCAAACAGGTTTAAAAAAAGCGAATTTAA
ACCCAAACCCTGATCCTTTTGCAGTAGTGGCGGCAGTGGGCGATCCGATGCAGATTTTCGTCGCTGGCATGGCGATCGCC
TTAAGCAGGACTCAAGGAGTTTTGCTCGCAGGGGGAACACAAATGTTAGCGGTGTATGCCTTGATGGAACGGATTTGTAA
GTACCATTCGCTTGATTTTGATCCGAAAAATATTGCGGTGGGAACGACACGCTGGGTCGCAGAAGATCCGACGGGGGACA
CGGTGGGTTTGGCCGAGTTAATTGGTGAAGTGCCTTTATTAGCGACGCAACTCAGTTTTCAAACTTCTCAATATTCACAA
CTGCAATCCTACGAACAGGGTTACGTCAAAGAAGGAGTCGGTGCGGGAGGATTGGCGATCGCCGCCCATTTGGCCTATGG
TGCGACCCAGGCAGAATTGTTAGCGATGATTGAACGTACCATTGTCCCCTACCTCGCGGCAAATTAA

Upstream 100 bases:

>100_bases
TCACGAATAAGTAGGAAGATTAGGGGGATCATTGCGATTCTCCTAATTTTTTTAGGAGGGAAATATCGTTCTGGCTAGAC
TGAGGGCAAGGAAAGGCAAC

Downstream 100 bases:

>100_bases
GGGATTAGGGCATTGAGTTTGCCAATTGGGGCGATAAATTTTACGCATTGTCACCGAATGGCGATCGCCCGCCGAAGTTT
GCGATACTGGGATTCGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MIRIYTQQTQGQAWLSNHQQKSVVFACGLGFTDTALIPNISAAGATPEARKYTAIADAECICHGFREKAIYPLPPLIVGA
SPAILSRAILSHYQIPAYLFDTGLWLKPDKNAVDCIDVSGQKARCVSTGKALEFSTVNKLFEQGLTWGETLATQYLNHLF
VLGECVVAGTTTALGVLTGLGYDANQKVNSSYIECNHDLKWQIVQTGLKKANLNPNPDPFAVVAAVGDPMQIFVAGMAIA
LSRTQGVLLAGGTQMLAVYALMERICKYHSLDFDPKNIAVGTTRWVAEDPTGDTVGLAELIGEVPLLATQLSFQTSQYSQ
LQSYEQGYVKEGVGAGGLAIAAHLAYGATQAELLAMIERTIVPYLAAN

Sequences:

>Translated_368_residues
MIRIYTQQTQGQAWLSNHQQKSVVFACGLGFTDTALIPNISAAGATPEARKYTAIADAECICHGFREKAIYPLPPLIVGA
SPAILSRAILSHYQIPAYLFDTGLWLKPDKNAVDCIDVSGQKARCVSTGKALEFSTVNKLFEQGLTWGETLATQYLNHLF
VLGECVVAGTTTALGVLTGLGYDANQKVNSSYIECNHDLKWQIVQTGLKKANLNPNPDPFAVVAAVGDPMQIFVAGMAIA
LSRTQGVLLAGGTQMLAVYALMERICKYHSLDFDPKNIAVGTTRWVAEDPTGDTVGLAELIGEVPLLATQLSFQTSQYSQ
LQSYEQGYVKEGVGAGGLAIAAHLAYGATQAELLAMIERTIVPYLAAN
>Mature_368_residues
MIRIYTQQTQGQAWLSNHQQKSVVFACGLGFTDTALIPNISAAGATPEARKYTAIADAECICHGFREKAIYPLPPLIVGA
SPAILSRAILSHYQIPAYLFDTGLWLKPDKNAVDCIDVSGQKARCVSTGKALEFSTVNKLFEQGLTWGETLATQYLNHLF
VLGECVVAGTTTALGVLTGLGYDANQKVNSSYIECNHDLKWQIVQTGLKKANLNPNPDPFAVVAAVGDPMQIFVAGMAIA
LSRTQGVLLAGGTQMLAVYALMERICKYHSLDFDPKNIAVGTTRWVAEDPTGDTVGLAELIGEVPLLATQLSFQTSQYSQ
LQSYEQGYVKEGVGAGGLAIAAHLAYGATQAELLAMIERTIVPYLAAN

Specific function: Unknown

COG id: COG2038

COG function: function code H; NaMN:DMB phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0284 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1742_SYNP2 (B1XPL7)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734987.1
- GeneID:   6057435
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1742
- HOGENOM:   HBG497525
- OMA:   QMLAVYA
- ProtClustDB:   PRK04447
- HAMAP:   MF_01086
- InterPro:   IPR003200
- InterPro:   IPR002805
- TIGRFAMs:   TIGR00303

Pfam domain/function: PF02277 DBI_PRT; SSF52733 NN:DBI_PRT

EC number: NA

Molecular weight: Translated: 39477; Mature: 39477

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIYTQQTQGQAWLSNHQQKSVVFACGLGFTDTALIPNISAAGATPEARKYTAIADAEC
CEEEEECCCCCCHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCEEECCCHHH
ICHGFREKAIYPLPPLIVGASPAILSRAILSHYQIPAYLFDTGLWLKPDKNAVDCIDVSG
HHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCCHHEECCCCEECCCCCCCEEEECCC
QKARCVSTGKALEFSTVNKLFEQGLTWGETLATQYLNHLFVLGECVVAGTTTALGVLTGL
CCEEEECCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GYDANQKVNSSYIECNHDLKWQIVQTGLKKANLNPNPDPFAVVAAVGDPMQIFVAGMAIA
CCCCCCCCCCCEEEECCCCEEHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
LSRTQGVLLAGGTQMLAVYALMERICKYHSLDFDPKNIAVGTTRWVAEDPTGDTVGLAEL
HHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECEEEEECCCCCCCCHHHHH
IGEVPLLATQLSFQTSQYSQLQSYEQGYVKEGVGAGGLAIAAHLAYGATQAELLAMIERT
HCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
IVPYLAAN
HHHHHCCC
>Mature Secondary Structure
MIRIYTQQTQGQAWLSNHQQKSVVFACGLGFTDTALIPNISAAGATPEARKYTAIADAEC
CEEEEECCCCCCHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCEEECCCHHH
ICHGFREKAIYPLPPLIVGASPAILSRAILSHYQIPAYLFDTGLWLKPDKNAVDCIDVSG
HHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCCHHEECCCCEECCCCCCCEEEECCC
QKARCVSTGKALEFSTVNKLFEQGLTWGETLATQYLNHLFVLGECVVAGTTTALGVLTGL
CCEEEECCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GYDANQKVNSSYIECNHDLKWQIVQTGLKKANLNPNPDPFAVVAAVGDPMQIFVAGMAIA
CCCCCCCCCCCEEEECCCCEEHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
LSRTQGVLLAGGTQMLAVYALMERICKYHSLDFDPKNIAVGTTRWVAEDPTGDTVGLAEL
HHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECEEEEECCCCCCCCHHHHH
IGEVPLLATQLSFQTSQYSQLQSYEQGYVKEGVGAGGLAIAAHLAYGATQAELLAMIERT
HCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
IVPYLAAN
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA