Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078336

Identifier: 170078336

GI number: 170078336

Start: 1816688

End: 1817464

Strand: Direct

Name: 170078336

Synonym: SYNPCC7002_A1729

Alternate gene names: NA

Gene position: 1816688-1817464 (Clockwise)

Preceding gene: 170078335

Following gene: 170078337

Centisome position: 60.39

GC content: 47.49

Gene sequence:

>777_bases
ATGGTTAAGGTTTGGGGAAAAGTGCTTGTTCTGGGTTTATTGATTTGGTTTTTGGGGTGGAGTCCGGTTTGGGCCGAATC
CCTAGGCGATCGCCTTGATCATTATCCCCAGTGGCAGGATTTACCAAGCTTGAATCCGGTGCAAACTGGAGAAGATCTAA
TTTATCCGGATTGGTTTGCGGGTACCTGGCAGGTCGCGAGTACCCTGATCGACCAGGTGGCTCCCCTCGCGCCGGATTTA
GTGACACCTGGCTTTGCCGCTAACGAAACATTAATTGGTCAGCCTTTTCTGTTTCGGGTGCGGTTTCAGCCCCAGACGAA
CTTTTTAGTAAAACCTTTATCTTTACCGAGGCAGACTGCGGCGGCGATTGTGGCAGACCGGGCGTTTAATGGTGCTGAAA
TTGCGAGGGCTTACCTAGGCGAAAAAACGGTACAAAAAGTAGAAGTCGATCCCCAGAATCCTAACCGCCAGTTAACGATT
TTAAAAGGCGATCGCCGCTTAATTTCTACCGTCACAGGCCGTGCCCAAGCTCAACCTGAACCCGACCAGTTTTTCAGTAG
TGAACTCACCCAACAGCAATTTCAAAGTAGCGAGCAAATCTACCTGAATCGCGTTGAAACAACGACGGATTATCAACAGC
TTGACTCCGATCATGTTACAGCCAATCAAGTAACTGCGATTTATTTGTCTCCCAGTGATCCAGACTTTTTCCAGGCCCAA
AATAAACCTGTAGCCCTTTACCATTACCATTTAGAGTTAACGAAAATTTCTGAATAA

Upstream 100 bases:

>100_bases
ATGCCTGCGGCTAAGGAAAAGGGCCTAGTGCGTGCGGAAGGAAAAGAATACTTAGTCCAGGAAGGGGATGTGATGTTGTT
CCGGTTTAATGTCTAGGGCA

Downstream 100 bases:

>100_bases
ATTAGGAATTTTAAACACGTTTCAGAACGATTTTTAATACAAAGCTAATCTTTTAAAAATTAAGGTGAATCATGAAAATT
CTTGGCACAACAAAACTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MVKVWGKVLVLGLLIWFLGWSPVWAESLGDRLDHYPQWQDLPSLNPVQTGEDLIYPDWFAGTWQVASTLIDQVAPLAPDL
VTPGFAANETLIGQPFLFRVRFQPQTNFLVKPLSLPRQTAAAIVADRAFNGAEIARAYLGEKTVQKVEVDPQNPNRQLTI
LKGDRRLISTVTGRAQAQPEPDQFFSSELTQQQFQSSEQIYLNRVETTTDYQQLDSDHVTANQVTAIYLSPSDPDFFQAQ
NKPVALYHYHLELTKISE

Sequences:

>Translated_258_residues
MVKVWGKVLVLGLLIWFLGWSPVWAESLGDRLDHYPQWQDLPSLNPVQTGEDLIYPDWFAGTWQVASTLIDQVAPLAPDL
VTPGFAANETLIGQPFLFRVRFQPQTNFLVKPLSLPRQTAAAIVADRAFNGAEIARAYLGEKTVQKVEVDPQNPNRQLTI
LKGDRRLISTVTGRAQAQPEPDQFFSSELTQQQFQSSEQIYLNRVETTTDYQQLDSDHVTANQVTAIYLSPSDPDFFQAQ
NKPVALYHYHLELTKISE
>Mature_258_residues
MVKVWGKVLVLGLLIWFLGWSPVWAESLGDRLDHYPQWQDLPSLNPVQTGEDLIYPDWFAGTWQVASTLIDQVAPLAPDL
VTPGFAANETLIGQPFLFRVRFQPQTNFLVKPLSLPRQTAAAIVADRAFNGAEIARAYLGEKTVQKVEVDPQNPNRQLTI
LKGDRRLISTVTGRAQAQPEPDQFFSSELTQQQFQSSEQIYLNRVETTTDYQQLDSDHVTANQVTAIYLSPSDPDFFQAQ
NKPVALYHYHLELTKISE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29155; Mature: 29155

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVWGKVLVLGLLIWFLGWSPVWAESLGDRLDHYPQWQDLPSLNPVQTGEDLIYPDWFA
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTWQVASTLIDQVAPLAPDLVTPGFAANETLIGQPFLFRVRFQPQTNFLVKPLSLPRQTA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCEEECCCCCCHHHH
AAIVADRAFNGAEIARAYLGEKTVQKVEVDPQNPNRQLTILKGDRRLISTVTGRAQAQPE
HHHHHHCCCCHHHHHHHHHCHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHCCCCCCCC
PDQFFSSELTQQQFQSSEQIYLNRVETTTDYQQLDSDHVTANQVTAIYLSPSDPDFFQAQ
HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCC
NKPVALYHYHLELTKISE
CCCEEEEEEEEEEEEECC
>Mature Secondary Structure
MVKVWGKVLVLGLLIWFLGWSPVWAESLGDRLDHYPQWQDLPSLNPVQTGEDLIYPDWFA
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTWQVASTLIDQVAPLAPDLVTPGFAANETLIGQPFLFRVRFQPQTNFLVKPLSLPRQTA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCEEECCCCCCHHHH
AAIVADRAFNGAEIARAYLGEKTVQKVEVDPQNPNRQLTILKGDRRLISTVTGRAQAQPE
HHHHHHCCCCHHHHHHHHHCHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHCCCCCCCC
PDQFFSSELTQQQFQSSEQIYLNRVETTTDYQQLDSDHVTANQVTAIYLSPSDPDFFQAQ
HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCC
NKPVALYHYHLELTKISE
CCCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA