| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078336
Identifier: 170078336
GI number: 170078336
Start: 1816688
End: 1817464
Strand: Direct
Name: 170078336
Synonym: SYNPCC7002_A1729
Alternate gene names: NA
Gene position: 1816688-1817464 (Clockwise)
Preceding gene: 170078335
Following gene: 170078337
Centisome position: 60.39
GC content: 47.49
Gene sequence:
>777_bases ATGGTTAAGGTTTGGGGAAAAGTGCTTGTTCTGGGTTTATTGATTTGGTTTTTGGGGTGGAGTCCGGTTTGGGCCGAATC CCTAGGCGATCGCCTTGATCATTATCCCCAGTGGCAGGATTTACCAAGCTTGAATCCGGTGCAAACTGGAGAAGATCTAA TTTATCCGGATTGGTTTGCGGGTACCTGGCAGGTCGCGAGTACCCTGATCGACCAGGTGGCTCCCCTCGCGCCGGATTTA GTGACACCTGGCTTTGCCGCTAACGAAACATTAATTGGTCAGCCTTTTCTGTTTCGGGTGCGGTTTCAGCCCCAGACGAA CTTTTTAGTAAAACCTTTATCTTTACCGAGGCAGACTGCGGCGGCGATTGTGGCAGACCGGGCGTTTAATGGTGCTGAAA TTGCGAGGGCTTACCTAGGCGAAAAAACGGTACAAAAAGTAGAAGTCGATCCCCAGAATCCTAACCGCCAGTTAACGATT TTAAAAGGCGATCGCCGCTTAATTTCTACCGTCACAGGCCGTGCCCAAGCTCAACCTGAACCCGACCAGTTTTTCAGTAG TGAACTCACCCAACAGCAATTTCAAAGTAGCGAGCAAATCTACCTGAATCGCGTTGAAACAACGACGGATTATCAACAGC TTGACTCCGATCATGTTACAGCCAATCAAGTAACTGCGATTTATTTGTCTCCCAGTGATCCAGACTTTTTCCAGGCCCAA AATAAACCTGTAGCCCTTTACCATTACCATTTAGAGTTAACGAAAATTTCTGAATAA
Upstream 100 bases:
>100_bases ATGCCTGCGGCTAAGGAAAAGGGCCTAGTGCGTGCGGAAGGAAAAGAATACTTAGTCCAGGAAGGGGATGTGATGTTGTT CCGGTTTAATGTCTAGGGCA
Downstream 100 bases:
>100_bases ATTAGGAATTTTAAACACGTTTCAGAACGATTTTTAATACAAAGCTAATCTTTTAAAAATTAAGGTGAATCATGAAAATT CTTGGCACAACAAAACTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MVKVWGKVLVLGLLIWFLGWSPVWAESLGDRLDHYPQWQDLPSLNPVQTGEDLIYPDWFAGTWQVASTLIDQVAPLAPDL VTPGFAANETLIGQPFLFRVRFQPQTNFLVKPLSLPRQTAAAIVADRAFNGAEIARAYLGEKTVQKVEVDPQNPNRQLTI LKGDRRLISTVTGRAQAQPEPDQFFSSELTQQQFQSSEQIYLNRVETTTDYQQLDSDHVTANQVTAIYLSPSDPDFFQAQ NKPVALYHYHLELTKISE
Sequences:
>Translated_258_residues MVKVWGKVLVLGLLIWFLGWSPVWAESLGDRLDHYPQWQDLPSLNPVQTGEDLIYPDWFAGTWQVASTLIDQVAPLAPDL VTPGFAANETLIGQPFLFRVRFQPQTNFLVKPLSLPRQTAAAIVADRAFNGAEIARAYLGEKTVQKVEVDPQNPNRQLTI LKGDRRLISTVTGRAQAQPEPDQFFSSELTQQQFQSSEQIYLNRVETTTDYQQLDSDHVTANQVTAIYLSPSDPDFFQAQ NKPVALYHYHLELTKISE >Mature_258_residues MVKVWGKVLVLGLLIWFLGWSPVWAESLGDRLDHYPQWQDLPSLNPVQTGEDLIYPDWFAGTWQVASTLIDQVAPLAPDL VTPGFAANETLIGQPFLFRVRFQPQTNFLVKPLSLPRQTAAAIVADRAFNGAEIARAYLGEKTVQKVEVDPQNPNRQLTI LKGDRRLISTVTGRAQAQPEPDQFFSSELTQQQFQSSEQIYLNRVETTTDYQQLDSDHVTANQVTAIYLSPSDPDFFQAQ NKPVALYHYHLELTKISE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29155; Mature: 29155
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKVWGKVLVLGLLIWFLGWSPVWAESLGDRLDHYPQWQDLPSLNPVQTGEDLIYPDWFA CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GTWQVASTLIDQVAPLAPDLVTPGFAANETLIGQPFLFRVRFQPQTNFLVKPLSLPRQTA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCEEECCCCCCHHHH AAIVADRAFNGAEIARAYLGEKTVQKVEVDPQNPNRQLTILKGDRRLISTVTGRAQAQPE HHHHHHCCCCHHHHHHHHHCHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHCCCCCCCC PDQFFSSELTQQQFQSSEQIYLNRVETTTDYQQLDSDHVTANQVTAIYLSPSDPDFFQAQ HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCC NKPVALYHYHLELTKISE CCCEEEEEEEEEEEEECC >Mature Secondary Structure MVKVWGKVLVLGLLIWFLGWSPVWAESLGDRLDHYPQWQDLPSLNPVQTGEDLIYPDWFA CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GTWQVASTLIDQVAPLAPDLVTPGFAANETLIGQPFLFRVRFQPQTNFLVKPLSLPRQTA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCEEECCCCCCHHHH AAIVADRAFNGAEIARAYLGEKTVQKVEVDPQNPNRQLTILKGDRRLISTVTGRAQAQPE HHHHHHCCCCHHHHHHHHHCHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHCCCCCCCC PDQFFSSELTQQQFQSSEQIYLNRVETTTDYQQLDSDHVTANQVTAIYLSPSDPDFFQAQ HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCC NKPVALYHYHLELTKISE CCCEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA