| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078333
Identifier: 170078333
GI number: 170078333
Start: 1812815
End: 1813447
Strand: Direct
Name: 170078333
Synonym: SYNPCC7002_A1726
Alternate gene names: NA
Gene position: 1812815-1813447 (Clockwise)
Preceding gene: 170078332
Following gene: 170078334
Centisome position: 60.27
GC content: 54.19
Gene sequence:
>633_bases ATGGCGACAAATCCTTACCAGGCCATCGGTTTACGGCACAATCCCTTTATCGGCACGGAACAACTGGCGCAGACGGTCAC TTTTTGGCTGGATCACGGTTATTCTGAAGCGCCCTTGCCAGGGGGAAATCAATTTGTGCAAATCCTGGGGGAAAAGGGTT TCGGGAAAACGGCCCATCTGCACCATTGGCGATCGCAAACGGGGGGAAGTTATTGTTATGTGCCGCCCAATTATCTCCAG CGCTGGCAATGGCTAAAAACGGGGGCGATCGCCTATTGGGACGAAGTAGATCGCCTGCCCCTGGGGTTATTTTTGGGGGG ACTGCTCCGGGTGCGGATGCGACGGGGGACGGTAGTAGTTGGCAGCCATGTAGATGTGAGTTTTTGGGCGAAACTTGCGG GGCTGAAAACAACAACGATTCAGCTTCCCTCTCTCGACATACCCACTTTGCAAGCCTGGGCTGCGTTCAAAATTGCGGCG GCCACCATCCCGGATCAGACTTGCCCTTTAATTCTTTCCCCAGAAAAGGCGGCGGAAATTGTGACCCAATCCCAGGGATC CTGGCGACGGGCCGCAGATTATCTCCACATCTGGGTGGCGGCGATCGCCTTTTCAAATTCACAACAAAATTGA
Upstream 100 bases:
>100_bases TATTTCGGTTGATGTGGTCTGTGGAAGTGCGGATCACGTTTCCAGGCTTGTTTAGCGACAAAGATACAGCGGTAGCTCCT TTTCAGGTATTGGCTTAGGC
Downstream 100 bases:
>100_bases CTCAACTGTAGGATGATGTACAAATGATGCAAAATTTGGCAGCAGCATTGAAATTATCCCGCAAGATAATGGCAGTGCTG ATTATTTTGTTGGCGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MATNPYQAIGLRHNPFIGTEQLAQTVTFWLDHGYSEAPLPGGNQFVQILGEKGFGKTAHLHHWRSQTGGSYCYVPPNYLQ RWQWLKTGAIAYWDEVDRLPLGLFLGGLLRVRMRRGTVVVGSHVDVSFWAKLAGLKTTTIQLPSLDIPTLQAWAAFKIAA ATIPDQTCPLILSPEKAAEIVTQSQGSWRRAADYLHIWVAAIAFSNSQQN
Sequences:
>Translated_210_residues MATNPYQAIGLRHNPFIGTEQLAQTVTFWLDHGYSEAPLPGGNQFVQILGEKGFGKTAHLHHWRSQTGGSYCYVPPNYLQ RWQWLKTGAIAYWDEVDRLPLGLFLGGLLRVRMRRGTVVVGSHVDVSFWAKLAGLKTTTIQLPSLDIPTLQAWAAFKIAA ATIPDQTCPLILSPEKAAEIVTQSQGSWRRAADYLHIWVAAIAFSNSQQN >Mature_209_residues ATNPYQAIGLRHNPFIGTEQLAQTVTFWLDHGYSEAPLPGGNQFVQILGEKGFGKTAHLHHWRSQTGGSYCYVPPNYLQR WQWLKTGAIAYWDEVDRLPLGLFLGGLLRVRMRRGTVVVGSHVDVSFWAKLAGLKTTTIQLPSLDIPTLQAWAAFKIAAA TIPDQTCPLILSPEKAAEIVTQSQGSWRRAADYLHIWVAAIAFSNSQQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23356; Mature: 23225
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNPYQAIGLRHNPFIGTEQLAQTVTFWLDHGYSEAPLPGGNQFVQILGEKGFGKTAHL CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCCCCHHH HHWRSQTGGSYCYVPPNYLQRWQWLKTGAIAYWDEVDRLPLGLFLGGLLRVRMRRGTVVV HHHHHCCCCEEEEECHHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHHHHHHHHHCCEEEE GSHVDVSFWAKLAGLKTTTIQLPSLDIPTLQAWAAFKIAAATIPDQTCPLILSPEKAAEI ECCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHEEEEECCCCCCCCEEECCHHHHHH VTQSQGSWRRAADYLHIWVAAIAFSNSQQN HHCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ATNPYQAIGLRHNPFIGTEQLAQTVTFWLDHGYSEAPLPGGNQFVQILGEKGFGKTAHL CCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCCCCHHH HHWRSQTGGSYCYVPPNYLQRWQWLKTGAIAYWDEVDRLPLGLFLGGLLRVRMRRGTVVV HHHHHCCCCEEEEECHHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHHHHHHHHHCCEEEE GSHVDVSFWAKLAGLKTTTIQLPSLDIPTLQAWAAFKIAAATIPDQTCPLILSPEKAAEI ECCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHEEEEECCCCCCCCEEECCHHHHHH VTQSQGSWRRAADYLHIWVAAIAFSNSQQN HHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA