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The map label for this gene is scpA

Identifier: 170078268

GI number: 170078268

Start: 1743719

End: 1744546

Strand: Direct

Name: scpA

Synonym: SYNPCC7002_A1660

Alternate gene names: NA

Gene position: 1743719-1744546 (Clockwise)

Preceding gene: 170078267

Following gene: 170078270

Centisome position: 57.97

GC content: 51.45

Gene sequence:

>828_bases
ATGGCTACCCAACCCCAAGCGGCGATCGCCACCCTCATTGAACTAGCCCAACAGGGAGAAATCGATCCCTGGGATGTGCA
AGTCATCGATGTTATCGATCAGTTCCTCAGTGAACTAGGACTTGCCGGGGATACAGACCCAATGCTCAGGGAAGCAGACC
TACCCCAGTCGGGTCAGACCTTTCTGTGGGCCTCTAAACTTGTCCTCCTCAAGGCCGACACCCTCGAAAGTTTAACGGTC
ATTGAAGCAGAGGTTCAGGACGAAGAATTCTACGAAGATTGGGACGCAAGCGATACGGAACGACTCCCCCTCAAGCTCGA
AAAAAGACTCCGGCGGCGGGCTACGGCACCTCCCCCCAAACGGCGGCGGGTCACCCTCCAGGAATTTATTGAGCAAATTC
AGCAAATTGCCAACGAAATCGAGGATCACACCCCCAAAAAACGCCTCAAAACGCCACGTAAACTGTCCAATAAAGCGGCC
ATTAAACAGATTACCCAGTTGGCCCATGATGAAAATCTCACGGAATTAGCCGCCCAGCTAGAACAATTTTTCCAGACCCA
GATGCCCCCTGATCCAGAAACCCCCGTGGTGTTTGCATTAGACGATTTAATCCGTCAGTGGATCGCCTATAAAGAAGCCA
ACGAATTTTTCCCCCAAGAGATCACCGCCAAACAACATCGCCACGAAAAGGTCGGGATCTTTTGGGCTTTACTTCTGTTG
TCGGCTCAATCAAAGGTGGTGCTTTCCCAGGACGATTTTTATGCGCCGGTGTTGGTGCGTCCGCTTTATCCAGGGCGACC
ACAAGGAGATTTAAACTCTAAACCGTAA

Upstream 100 bases:

>100_bases
ACCGATACCGAGACAGGAGACACCCAGGACTCCGCTGAAGCACCCCCAGAAGAATCTCAACCTGAGCAAACGGCCTAATT
TTTGACCCTTCGATAAAGCC

Downstream 100 bases:

>100_bases
ACGATTTAAGAATCCAGCCCAATAAAATGCCTACCCCTGTGAAGCGAACAACTTGCCAAAAGGGTTCCTGCCACTTGAGC
AACTGACTTTCGAGTTGCAG

Product: segregation and condensation protein A

Products: NA

Alternate protein names: Segregation And Condensation Protein A; Condensin Subunit ScpA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MATQPQAAIATLIELAQQGEIDPWDVQVIDVIDQFLSELGLAGDTDPMLREADLPQSGQTFLWASKLVLLKADTLESLTV
IEAEVQDEEFYEDWDASDTERLPLKLEKRLRRRATAPPPKRRRVTLQEFIEQIQQIANEIEDHTPKKRLKTPRKLSNKAA
IKQITQLAHDENLTELAAQLEQFFQTQMPPDPETPVVFALDDLIRQWIAYKEANEFFPQEITAKQHRHEKVGIFWALLLL
SAQSKVVLSQDDFYAPVLVRPLYPGRPQGDLNSKP

Sequences:

>Translated_275_residues
MATQPQAAIATLIELAQQGEIDPWDVQVIDVIDQFLSELGLAGDTDPMLREADLPQSGQTFLWASKLVLLKADTLESLTV
IEAEVQDEEFYEDWDASDTERLPLKLEKRLRRRATAPPPKRRRVTLQEFIEQIQQIANEIEDHTPKKRLKTPRKLSNKAA
IKQITQLAHDENLTELAAQLEQFFQTQMPPDPETPVVFALDDLIRQWIAYKEANEFFPQEITAKQHRHEKVGIFWALLLL
SAQSKVVLSQDDFYAPVLVRPLYPGRPQGDLNSKP
>Mature_274_residues
ATQPQAAIATLIELAQQGEIDPWDVQVIDVIDQFLSELGLAGDTDPMLREADLPQSGQTFLWASKLVLLKADTLESLTVI
EAEVQDEEFYEDWDASDTERLPLKLEKRLRRRATAPPPKRRRVTLQEFIEQIQQIANEIEDHTPKKRLKTPRKLSNKAAI
KQITQLAHDENLTELAAQLEQFFQTQMPPDPETPVVFALDDLIRQWIAYKEANEFFPQEITAKQHRHEKVGIFWALLLLS
AQSKVVLSQDDFYAPVLVRPLYPGRPQGDLNSKP

Specific function: Unknown

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31455; Mature: 31324

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQPQAAIATLIELAQQGEIDPWDVQVIDVIDQFLSELGLAGDTDPMLREADLPQSGQT
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCC
FLWASKLVLLKADTLESLTVIEAEVQDEEFYEDWDASDTERLPLKLEKRLRRRATAPPPK
HHHHHHHHEEECCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCH
RRRVTLQEFIEQIQQIANEIEDHTPKKRLKTPRKLSNKAAIKQITQLAHDENLTELAAQL
HHCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EQFFQTQMPPDPETPVVFALDDLIRQWIAYKEANEFFPQEITAKQHRHEKVGIFWALLLL
HHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SAQSKVVLSQDDFYAPVLVRPLYPGRPQGDLNSKP
HCCCCEEECCCCCCCCHHEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATQPQAAIATLIELAQQGEIDPWDVQVIDVIDQFLSELGLAGDTDPMLREADLPQSGQT
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCC
FLWASKLVLLKADTLESLTVIEAEVQDEEFYEDWDASDTERLPLKLEKRLRRRATAPPPK
HHHHHHHHEEECCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCH
RRRVTLQEFIEQIQQIANEIEDHTPKKRLKTPRKLSNKAAIKQITQLAHDENLTELAAQL
HHCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EQFFQTQMPPDPETPVVFALDDLIRQWIAYKEANEFFPQEITAKQHRHEKVGIFWALLLL
HHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SAQSKVVLSQDDFYAPVLVRPLYPGRPQGDLNSKP
HCCCCEEECCCCCCCCHHEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA