| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170078267
Identifier: 170078267
GI number: 170078267
Start: 1743235
End: 1743696
Strand: Direct
Name: 170078267
Synonym: SYNPCC7002_A1659
Alternate gene names: NA
Gene position: 1743235-1743696 (Clockwise)
Preceding gene: 170078266
Following gene: 170078268
Centisome position: 57.95
GC content: 51.3
Gene sequence:
>462_bases ATGCGGCAACTGAATTTTTTATTGTTTTTTGCCCTGTGCTTAGCCCTAGCGCTATTTAGTATCGAAAATACGCAACCCGT CGGAATTAACATCATTCCGGGGTTCCAAGCCGAAGCGCCCCTCTCCATCGAACTCCTGCTGGCGGTGGGCACAGGGGCGA TTTTAGCTTGGATGTTTAGCCTGTGGGATCAGTTGCAGCGGCAAATTGAATCATGGAAAGCCCAACGGGAACTGAAGCTC CAGAGTCAAAAAATTGAGGAATTAGAAAAAGCTTTGGCTGAACTGCAGGCCGCCCAACAAAATGCCGCAGAATCATCGGC AGATTCCCCCAGTGCGACGACTGCATCCACCGCAGACAAAACGGTGCCTGAACCTGAAACTTCTACCGATACCGAGACAG GAGACACCCAGGACTCCGCTGAAGCACCCCCAGAAGAATCTCAACCTGAGCAAACGGCCTAA
Upstream 100 bases:
>100_bases TTGGGGCAATTTTTTTGGGTTGGAACAATTACGATATCCTAGGGGGTGTGTTGGCGATCGCCATCGAGATCAGCCACGCG ATGCATCCTGTGGAGAGATC
Downstream 100 bases:
>100_bases TTTTTGACCCTTCGATAAAGCCATGGCTACCCAACCCCAAGCGGCGATCGCCACCCTCATTGAACTAGCCCAACAGGGAG AAATCGATCCCTGGGATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRQLNFLLFFALCLALALFSIENTQPVGINIIPGFQAEAPLSIELLLAVGTGAILAWMFSLWDQLQRQIESWKAQRELKL QSQKIEELEKALAELQAAQQNAAESSADSPSATTASTADKTVPEPETSTDTETGDTQDSAEAPPEESQPEQTA
Sequences:
>Translated_153_residues MRQLNFLLFFALCLALALFSIENTQPVGINIIPGFQAEAPLSIELLLAVGTGAILAWMFSLWDQLQRQIESWKAQRELKL QSQKIEELEKALAELQAAQQNAAESSADSPSATTASTADKTVPEPETSTDTETGDTQDSAEAPPEESQPEQTA >Mature_153_residues MRQLNFLLFFALCLALALFSIENTQPVGINIIPGFQAEAPLSIELLLAVGTGAILAWMFSLWDQLQRQIESWKAQRELKL QSQKIEELEKALAELQAAQQNAAESSADSPSATTASTADKTVPEPETSTDTETGDTQDSAEAPPEESQPEQTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16620; Mature: 16620
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQLNFLLFFALCLALALFSIENTQPVGINIIPGFQAEAPLSIELLLAVGTGAILAWMFS CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH LWDQLQRQIESWKAQRELKLQSQKIEELEKALAELQAAQQNAAESSADSPSATTASTADK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TVPEPETSTDTETGDTQDSAEAPPEESQPEQTA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRQLNFLLFFALCLALALFSIENTQPVGINIIPGFQAEAPLSIELLLAVGTGAILAWMFS CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH LWDQLQRQIESWKAQRELKLQSQKIEELEKALAELQAAQQNAAESSADSPSATTASTADK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TVPEPETSTDTETGDTQDSAEAPPEESQPEQTA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA