Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078263

Identifier: 170078263

GI number: 170078263

Start: 1735678

End: 1736118

Strand: Reverse

Name: 170078263

Synonym: SYNPCC7002_A1655

Alternate gene names: NA

Gene position: 1736118-1735678 (Counterclockwise)

Preceding gene: 170078264

Following gene: 170078262

Centisome position: 57.72

GC content: 47.39

Gene sequence:

>441_bases
ATGGTTCAAACGCCTAGGATTCCCGACATCACCTACGACCAAGATTATCAACTTTGGCTGCAACAGACCCTCGAAAAATT
GCGCCTCCGGGATTATATGGCCGTCGATTGGGAACATCTAATTGATGAAATAGAATCGATGGGTAAACGCGATCGCCACC
GCCTCAAGAGTAATTTGATCATTTTGTTGATGCACTTACTACAGTGGGACTTTCAGGCAGAGAAACGTTCTGGTAGCTGG
GAGTCAACGATCATTGAGCACCGTCGCCGCATTATTGACGAGTTAGAAGATTCTCCGAGTTTGCGGCCCTATTTACAGCA
GATTTTAGCCTCTGCCTACACCACGGCACGGCAACGGACAAAGGCAGAAACAGGTTTATCCCAAGACAGCTTTCCCCAGG
AATCTCCCTACGATCTAGAACAGATTCTTGGTTTGGGTTAA

Upstream 100 bases:

>100_bases
GGTTGCGACCTTAAAAAATTGGGTCGAAGCCGCAGGCCAGTAAGCCCCTGGGGAATCGTTATAATGGCCCTAGGGTTAAG
CGATTTCCCCTTTTTTAGCC

Downstream 100 bases:

>100_bases
GCCATTACAATCTCCATTTTTGTGAACCAAAACCAGCAAATTTACGTCAAAAATTGTGACTCAGGGTTTAGTAATGGCGG
GAAAACCTCACCTAAACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MVQTPRIPDITYDQDYQLWLQQTLEKLRLRDYMAVDWEHLIDEIESMGKRDRHRLKSNLIILLMHLLQWDFQAEKRSGSW
ESTIIEHRRRIIDELEDSPSLRPYLQQILASAYTTARQRTKAETGLSQDSFPQESPYDLEQILGLG

Sequences:

>Translated_146_residues
MVQTPRIPDITYDQDYQLWLQQTLEKLRLRDYMAVDWEHLIDEIESMGKRDRHRLKSNLIILLMHLLQWDFQAEKRSGSW
ESTIIEHRRRIIDELEDSPSLRPYLQQILASAYTTARQRTKAETGLSQDSFPQESPYDLEQILGLG
>Mature_146_residues
MVQTPRIPDITYDQDYQLWLQQTLEKLRLRDYMAVDWEHLIDEIESMGKRDRHRLKSNLIILLMHLLQWDFQAEKRSGSW
ESTIIEHRRRIIDELEDSPSLRPYLQQILASAYTTARQRTKAETGLSQDSFPQESPYDLEQILGLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17372; Mature: 17372

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQTPRIPDITYDQDYQLWLQQTLEKLRLRDYMAVDWEHLIDEIESMGKRDRHRLKSNLI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLMHLLQWDFQAEKRSGSWESTIIEHRRRIIDELEDSPSLRPYLQQILASAYTTARQRT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KAETGLSQDSFPQESPYDLEQILGLG
HHHHCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MVQTPRIPDITYDQDYQLWLQQTLEKLRLRDYMAVDWEHLIDEIESMGKRDRHRLKSNLI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLMHLLQWDFQAEKRSGSWESTIIEHRRRIIDELEDSPSLRPYLQQILASAYTTARQRT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KAETGLSQDSFPQESPYDLEQILGLG
HHHHCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA