| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078225
Identifier: 170078225
GI number: 170078225
Start: 1697612
End: 1697935
Strand: Reverse
Name: 170078225
Synonym: SYNPCC7002_A1617
Alternate gene names: NA
Gene position: 1697935-1697612 (Counterclockwise)
Preceding gene: 170078226
Following gene: 170078224
Centisome position: 56.45
GC content: 50.62
Gene sequence:
>324_bases ATGATGACAAACCATGCTGTACAACGGTTGGTGGAATTGGCCGAAGGCATTTACATCGAAACTGCGATCCCTAGGGAAAG TCATCCTGCGCTGCGGTCTGGCTTTGCGGGTTATCCCAGTAATCCCCGTTGGAATGTCCGCAAATATCAGGCTTGGAAAC AAGGCAAACAATGGCGACAAGCTTTAGATAATGGGCAACTGGTGGTTGAAGAGCAGCACCTAGTCCCCGTGGTACAACCG GAATGCCAAGCCCCACCTCTCCCCAAGAAAACAACGCGAGATTGGCGATCGCCCCTCAAGAAATTAACCTTTTCGTTGAA CTAG
Upstream 100 bases:
>100_bases CTCAACCATTGATACCAAAAGCCAGTCTTGTTTTTTGGTGCATTTAGTAAAGGGTAATGTGATCTTGTAATATTCGTTGA CATTAGGGAGGCAGAGTCAG
Downstream 100 bases:
>100_bases GCTTTCGTGGATTGACGGGATGGGGTTACAGTAAAATCCTCACACTTTATCTGTCCTAAAATTCCCGTTGGCGATCGCCC TATGCATTGCGATTATTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MMTNHAVQRLVELAEGIYIETAIPRESHPALRSGFAGYPSNPRWNVRKYQAWKQGKQWRQALDNGQLVVEEQHLVPVVQP ECQAPPLPKKTTRDWRSPLKKLTFSLN
Sequences:
>Translated_107_residues MMTNHAVQRLVELAEGIYIETAIPRESHPALRSGFAGYPSNPRWNVRKYQAWKQGKQWRQALDNGQLVVEEQHLVPVVQP ECQAPPLPKKTTRDWRSPLKKLTFSLN >Mature_107_residues MMTNHAVQRLVELAEGIYIETAIPRESHPALRSGFAGYPSNPRWNVRKYQAWKQGKQWRQALDNGQLVVEEQHLVPVVQP ECQAPPLPKKTTRDWRSPLKKLTFSLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12358; Mature: 12358
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTNHAVQRLVELAEGIYIETAIPRESHPALRSGFAGYPSNPRWNVRKYQAWKQGKQWRQ CCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH ALDNGQLVVEEQHLVPVVQPECQAPPLPKKTTRDWRSPLKKLTFSLN HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MMTNHAVQRLVELAEGIYIETAIPRESHPALRSGFAGYPSNPRWNVRKYQAWKQGKQWRQ CCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH ALDNGQLVVEEQHLVPVVQPECQAPPLPKKTTRDWRSPLKKLTFSLN HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA