Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078225

Identifier: 170078225

GI number: 170078225

Start: 1697612

End: 1697935

Strand: Reverse

Name: 170078225

Synonym: SYNPCC7002_A1617

Alternate gene names: NA

Gene position: 1697935-1697612 (Counterclockwise)

Preceding gene: 170078226

Following gene: 170078224

Centisome position: 56.45

GC content: 50.62

Gene sequence:

>324_bases
ATGATGACAAACCATGCTGTACAACGGTTGGTGGAATTGGCCGAAGGCATTTACATCGAAACTGCGATCCCTAGGGAAAG
TCATCCTGCGCTGCGGTCTGGCTTTGCGGGTTATCCCAGTAATCCCCGTTGGAATGTCCGCAAATATCAGGCTTGGAAAC
AAGGCAAACAATGGCGACAAGCTTTAGATAATGGGCAACTGGTGGTTGAAGAGCAGCACCTAGTCCCCGTGGTACAACCG
GAATGCCAAGCCCCACCTCTCCCCAAGAAAACAACGCGAGATTGGCGATCGCCCCTCAAGAAATTAACCTTTTCGTTGAA
CTAG

Upstream 100 bases:

>100_bases
CTCAACCATTGATACCAAAAGCCAGTCTTGTTTTTTGGTGCATTTAGTAAAGGGTAATGTGATCTTGTAATATTCGTTGA
CATTAGGGAGGCAGAGTCAG

Downstream 100 bases:

>100_bases
GCTTTCGTGGATTGACGGGATGGGGTTACAGTAAAATCCTCACACTTTATCTGTCCTAAAATTCCCGTTGGCGATCGCCC
TATGCATTGCGATTATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MMTNHAVQRLVELAEGIYIETAIPRESHPALRSGFAGYPSNPRWNVRKYQAWKQGKQWRQALDNGQLVVEEQHLVPVVQP
ECQAPPLPKKTTRDWRSPLKKLTFSLN

Sequences:

>Translated_107_residues
MMTNHAVQRLVELAEGIYIETAIPRESHPALRSGFAGYPSNPRWNVRKYQAWKQGKQWRQALDNGQLVVEEQHLVPVVQP
ECQAPPLPKKTTRDWRSPLKKLTFSLN
>Mature_107_residues
MMTNHAVQRLVELAEGIYIETAIPRESHPALRSGFAGYPSNPRWNVRKYQAWKQGKQWRQALDNGQLVVEEQHLVPVVQP
ECQAPPLPKKTTRDWRSPLKKLTFSLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12358; Mature: 12358

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTNHAVQRLVELAEGIYIETAIPRESHPALRSGFAGYPSNPRWNVRKYQAWKQGKQWRQ
CCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ALDNGQLVVEEQHLVPVVQPECQAPPLPKKTTRDWRSPLKKLTFSLN
HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMTNHAVQRLVELAEGIYIETAIPRESHPALRSGFAGYPSNPRWNVRKYQAWKQGKQWRQ
CCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ALDNGQLVVEEQHLVPVVQPECQAPPLPKKTTRDWRSPLKKLTFSLN
HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA