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The map label for this gene is yfgC [H]

Identifier: 170078178

GI number: 170078178

Start: 1653303

End: 1654172

Strand: Reverse

Name: yfgC [H]

Synonym: SYNPCC7002_A1569

Alternate gene names: 170078178

Gene position: 1654172-1653303 (Counterclockwise)

Preceding gene: 170078179

Following gene: 170078175

Centisome position: 54.99

GC content: 50.0

Gene sequence:

>870_bases
ATGTTGCATCGTCGAAAAAACCGCTGGATGTATGGCCTATTAGCCTGCATTGTCGCGATCAGCGTCAACCTTGCGACACC
CACCGTTAGCCAGGCGGGTTTTTTTGAAAATCTTTTGCGGGGCGTTTTAATCTGGGGGGTGCAGAGTTATCAAATTTCCA
ATCTCTCGGATGCCCAGGAACAGGACTTTGGTCAACAAATTCACAATGAACTGACCCGTTCCGGCCAGGTTAAACTCTAT
CAAAACCAGCGGGTTGTGAGCTACATCAACGAAATTGGCCAACGTTTAGCGCGCCAAAGCACACGCCCAAATTTAAATTA
CAAATTCTTTGTCGTCGAAGATGACAGCGTGAATGCCTTTGCCACCATGGGAGGCTACAACTACATCAACACAGGGCTAA
TTAAAACCGCCGCTAATGAGGCAGAGCTTGCTAGTGTGATTGGCCATGAAATTGGTCACATTGCGGCGAAACATTCCCTA
GAACAGATGAGAATGCAGGCCCGGAACCAGGGGATTTTGGCGGCGACGGGCTTGGATAGTAATCAGATTGTCCAATTGGG
GGTGGCGATCGCCGTTGATTATCCCAACAGTCGCAGTGACGAAACGGAAGCGGATGATCTTGGGTTTAATATGTTGACCC
GGGTCGGCTATGCCCCAGAGGCGATGGCTTCATTTATGAAAAAGTTGATGGCAGCCAACAGTGGTGGTGGTCGTCCCCCT
GAATTTTTGAGTACCCACCCAGCCACCAATGATCGAATTGTGCGACTCCAAAATAAAGCCGCCCGTTATTCGGGGAATCC
CCAAGGTTCGCTCTATGCGGAGGGGTTAAATCAGCAACGTTATCGGAGTCGTCTGTCGCCCCTGCTCTAA

Upstream 100 bases:

>100_bases
AACGGAAAATTGCGATTGGTTACTATAGAAAAGAACAAGCCTTCGGTTTGTTAGCCAATCTACCTTCCCTACTCAAAACA
GCCACAGGAACACAAGCATC

Downstream 100 bases:

>100_bases
ATGGTTGGTTTTAACTCAGTTTTTAGGCGATCGCTTTCCTTGGCGATCGCCTTTTGTGTGTTGTACCTATGGGCAAAAAA
ATCCCCCATGGTGCTGGGGG

Product: M48 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MLHRRKNRWMYGLLACIVAISVNLATPTVSQAGFFENLLRGVLIWGVQSYQISNLSDAQEQDFGQQIHNELTRSGQVKLY
QNQRVVSYINEIGQRLARQSTRPNLNYKFFVVEDDSVNAFATMGGYNYINTGLIKTAANEAELASVIGHEIGHIAAKHSL
EQMRMQARNQGILAATGLDSNQIVQLGVAIAVDYPNSRSDETEADDLGFNMLTRVGYAPEAMASFMKKLMAANSGGGRPP
EFLSTHPATNDRIVRLQNKAARYSGNPQGSLYAEGLNQQRYRSRLSPLL

Sequences:

>Translated_289_residues
MLHRRKNRWMYGLLACIVAISVNLATPTVSQAGFFENLLRGVLIWGVQSYQISNLSDAQEQDFGQQIHNELTRSGQVKLY
QNQRVVSYINEIGQRLARQSTRPNLNYKFFVVEDDSVNAFATMGGYNYINTGLIKTAANEAELASVIGHEIGHIAAKHSL
EQMRMQARNQGILAATGLDSNQIVQLGVAIAVDYPNSRSDETEADDLGFNMLTRVGYAPEAMASFMKKLMAANSGGGRPP
EFLSTHPATNDRIVRLQNKAARYSGNPQGSLYAEGLNQQRYRSRLSPLL
>Mature_289_residues
MLHRRKNRWMYGLLACIVAISVNLATPTVSQAGFFENLLRGVLIWGVQSYQISNLSDAQEQDFGQQIHNELTRSGQVKLY
QNQRVVSYINEIGQRLARQSTRPNLNYKFFVVEDDSVNAFATMGGYNYINTGLIKTAANEAELASVIGHEIGHIAAKHSL
EQMRMQARNQGILAATGLDSNQIVQLGVAIAVDYPNSRSDETEADDLGFNMLTRVGYAPEAMASFMKKLMAANSGGGRPP
EFLSTHPATNDRIVRLQNKAARYSGNPQGSLYAEGLNQQRYRSRLSPLL

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=221, Percent_Identity=31.2217194570136, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI87081800, Length=251, Percent_Identity=27.8884462151394, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082185, Length=231, Percent_Identity=28.1385281385281, Blast_Score=81, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6322940, Length=160, Percent_Identity=32.5, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 32043; Mature: 32043

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHRRKNRWMYGLLACIVAISVNLATPTVSQAGFFENLLRGVLIWGVQSYQISNLSDAQE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHH
QDFGQQIHNELTRSGQVKLYQNQRVVSYINEIGQRLARQSTRPNLNYKFFVVEDDSVNAF
HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEE
ATMGGYNYINTGLIKTAANEAELASVIGHEIGHIAAKHSLEQMRMQARNQGILAATGLDS
EECCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
NQIVQLGVAIAVDYPNSRSDETEADDLGFNMLTRVGYAPEAMASFMKKLMAANSGGGRPP
CCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
EFLSTHPATNDRIVRLQNKAARYSGNPQGSLYAEGLNQQRYRSRLSPLL
HHHCCCCCCCCEEEEEECHHHHCCCCCCCCHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MLHRRKNRWMYGLLACIVAISVNLATPTVSQAGFFENLLRGVLIWGVQSYQISNLSDAQE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHH
QDFGQQIHNELTRSGQVKLYQNQRVVSYINEIGQRLARQSTRPNLNYKFFVVEDDSVNAF
HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEE
ATMGGYNYINTGLIKTAANEAELASVIGHEIGHIAAKHSLEQMRMQARNQGILAATGLDS
EECCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
NQIVQLGVAIAVDYPNSRSDETEADDLGFNMLTRVGYAPEAMASFMKKLMAANSGGGRPP
CCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
EFLSTHPATNDRIVRLQNKAARYSGNPQGSLYAEGLNQQRYRSRLSPLL
HHHCCCCCCCCEEEEEECHHHHCCCCCCCCHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]